RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ODF2LQ9ULJ1 636 aa22.39■■□□□ 1.18
CACNA1A-257ENST00000638009 SETD1BQ9UPS6 1966 aaKnown RBP22.39■■□□□ 1.17
CACNA1A-257ENST00000638009 RSRC1Q96IZ7 334 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 FERMT2Q96AC1 680 aa22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 ELL2O00472 640 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 EXOC6Q8TAG9 804 aa22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 ANO10Q9NW15 660 aa22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 CWC25Q9NXE8 425 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 CCDC174Q6PII3 467 aa22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 K7ELQ4 463 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 RASAL2Q9UJF2 1139 aa22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 CCDC196A0A1B0GTZ2 297 aa22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 RAI14Q9P0K7 980 aa22.38■■□□□ 1.17
CACNA1A-257ENST00000638009 STMN1P16949 149 aa22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 PRPHP41219 470 aa22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 KIF5BP33176 963 aa22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 PANK3Q9H999 370 aa22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 CFAP58Q5T655 872 aa22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 WDHD1O75717 1129 aaPredicted RBP22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 MRPS9P82933 396 aaKnown RBP22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 TTC39AQ5SRH9 613 aa22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 SEPT10Q9P0V9 454 aa22.37■■□□□ 1.17
CACNA1A-257ENST00000638009 PLIN1O60240 522 aa22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 TOP1P11387 765 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 KIAA1524Q8TCG1 905 aa22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 YEATS4O95619 227 aa22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 ATP2B2Q01814 1243 aa22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 GOLIM4O00461 696 aa22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 JAKMIP2Q96AA8 810 aa22.36■■□□□ 1.17
CACNA1A-257ENST00000638009 MXRA7P84157 204 aa22.35■■□□□ 1.17
CACNA1A-257ENST00000638009 GNAI2P04899 355 aa22.35■■□□□ 1.17
CACNA1A-257ENST00000638009 PSME1Q06323 249 aa22.35■■□□□ 1.17
CACNA1A-257ENST00000638009 RAPGEF4Q8WZA2 1011 aa22.35■■□□□ 1.17
CACNA1A-257ENST00000638009 OPA1O60313 960 aa22.35■■□□□ 1.17
CACNA1A-257ENST00000638009 SMC1BQ8NDV3 1235 aa22.35■■□□□ 1.17
CACNA1A-257ENST00000638009 STXBP4Q6ZWJ1 553 aa22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 NUP88Q99567 741 aaPredicted RBP22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 MYO15BQ96JP2 1530 aa22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 ATP2A1O14983 1001 aa22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 MAPK8IP2Q13387 824 aaPredicted RBP22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 TMEM87AQ8NBN3 555 aa22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 IL27Q8NEV9 243 aa22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 MTMR7Q9Y216 660 aa22.34■■□□□ 1.17
CACNA1A-257ENST00000638009 CCDC183Q5T5S1 534 aa22.33■■□□□ 1.17
CACNA1A-257ENST00000638009 RPUSD2Q8IZ73 545 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-257ENST00000638009 MACROD2A1Z1Q3 448 aa22.33■■□□□ 1.17
CACNA1A-257ENST00000638009 CUX1P39880 1505 aa22.33■■□□□ 1.16
CACNA1A-257ENST00000638009 TPD52P55327 224 aaPredicted RBP22.33■■□□□ 1.16
CACNA1A-257ENST00000638009 SSBP05455 408 aaKnown RBP eCLIP22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 SCAND2PQ9GZW5 306 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 CEP120Q8N960 986 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 TCHPQ9BT92 498 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 VCX3BQ9H321 246 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 EHMT1Q9H9B1 1298 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 PSMC4P43686 418 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 ARFGAP3Q9NP61 516 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 ALDH3A1P30838 453 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 WDR63Q8IWG1 891 aa22.32■■□□□ 1.16
CACNA1A-257ENST00000638009 TMEM266Q2M3C6 531 aa22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 BLOC1S2Q6QNY1 142 aa22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 KIAA0753Q2KHM9 967 aa22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 A0A1B0GUA9 196 aa22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 SELENOOQ9BVL4 669 aa22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 LUC7L2Q9Y383 392 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-257ENST00000638009 CEP128Q6ZU80 1094 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 LMAN1P49257 510 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 CCDC77Q9BR77 488 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 ERCC6LQ2NKX8 1250 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 GBP7Q8N8V2 638 aaPredicted RBP22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 CCT4P50991 539 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 MAATS1Q7Z4T9 603 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 CLIP2Q9UDT6 1046 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
CACNA1A-257ENST00000638009 ZBTB16Q05516 673 aa22.29■■□□□ 1.16
CACNA1A-257ENST00000638009 RNF168Q8IYW5 571 aaPredicted RBP22.29■■□□□ 1.16
CACNA1A-257ENST00000638009 ZBTB17Q13105 803 aa22.29■■□□□ 1.16
CACNA1A-257ENST00000638009 PRIMPOLQ96LW4 560 aa22.29■■□□□ 1.16
CACNA1A-257ENST00000638009 RBM25P49756 843 aaKnown RBP22.29■■□□□ 1.16
CACNA1A-257ENST00000638009 PRPF31Q8WWY3 499 aaKnown RBP22.29■■□□□ 1.16
CACNA1A-257ENST00000638009 CNNM1Q9NRU3 951 aa22.29■■□□□ 1.16
CACNA1A-257ENST00000638009 SUDS3Q9H7L9 328 aaPredicted RBP22.28■■□□□ 1.16
CACNA1A-257ENST00000638009 USP37Q86T82 979 aa22.28■■□□□ 1.16
CACNA1A-257ENST00000638009 KRT222Q8N1A0 295 aa22.28■■□□□ 1.16
CACNA1A-257ENST00000638009 CUX2O14529 1486 aa22.28■■□□□ 1.16
CACNA1A-257ENST00000638009 AMPD3Q01432 767 aa22.28■■□□□ 1.16
CACNA1A-257ENST00000638009 U3KPZ7 1027 aaPredicted RBP22.28■■□□□ 1.16
CACNA1A-257ENST00000638009 CCDC171Q6TFL3 1326 aa22.28■■□□□ 1.16
CACNA1A-257ENST00000638009 TUBBP07437 444 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 A6NNZ2 444 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 TUBB8Q3ZCM7 444 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 SNX16P57768 344 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 PPFIBP2Q8ND30 876 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 URI1O94763 535 aaPredicted RBP22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 TUBB4AP04350 444 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 SARNPP82979 210 aaKnown RBP22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 FOXD1Q16676 465 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms