RNA–Protein interactions for RNA: ENST00000633087.1

GRAMD1B-212, Transcript of GRAM domain containing 1B, humanhuman

TSL 4

Gene GRAMD1B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-212ENST00000633087 CABP4P57796 275 aa20.25■□□□□ 0.83
GRAMD1B-212ENST00000633087 SGIP1Q9BQI5 828 aa20.25■□□□□ 0.83
GRAMD1B-212ENST00000633087 ATG3Q9NT62 314 aa20.25■□□□□ 0.83
GRAMD1B-212ENST00000633087 CICQ96RK0 1608 aaPredicted RBP20.24■□□□□ 0.83
GRAMD1B-212ENST00000633087 PPP2R1AP30153 589 aa20.24■□□□□ 0.83
GRAMD1B-212ENST00000633087 AK7Q96M32 723 aa20.23■□□□□ 0.83
GRAMD1B-212ENST00000633087 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
GRAMD1B-212ENST00000633087 TJP1Q07157 1748 aa20.22■□□□□ 0.83
GRAMD1B-212ENST00000633087 MSH5O43196 834 aa20.21■□□□□ 0.83
GRAMD1B-212ENST00000633087 FLAD1Q8NFF5 587 aa20.21■□□□□ 0.83
GRAMD1B-212ENST00000633087 POLD1P28340 1107 aa20.2■□□□□ 0.82
GRAMD1B-212ENST00000633087 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
GRAMD1B-212ENST00000633087 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1B-212ENST00000633087 LINC00116Q8NCU8 138 aa20.2■□□□□ 0.82
GRAMD1B-212ENST00000633087 NUDCQ9Y266 331 aa20.2■□□□□ 0.82
GRAMD1B-212ENST00000633087 SIPA1L3O60292 1781 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1B-212ENST00000633087 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
GRAMD1B-212ENST00000633087 ITPK1Q13572 414 aa20.19■□□□□ 0.82
GRAMD1B-212ENST00000633087 NFATC2IPQ8NCF5 419 aa20.19■□□□□ 0.82
GRAMD1B-212ENST00000633087 ARXQ96QS3 562 aa20.19■□□□□ 0.82
GRAMD1B-212ENST00000633087 RBM42Q9BTD8 480 aaKnown RBP20.19■□□□□ 0.82
GRAMD1B-212ENST00000633087 UBR2Q8IWV8 1755 aa20.18■□□□□ 0.82
GRAMD1B-212ENST00000633087 RNMTO43148 476 aaKnown RBP20.17■□□□□ 0.82
GRAMD1B-212ENST00000633087 SSFA2P28290 1259 aa20.17■□□□□ 0.82
GRAMD1B-212ENST00000633087 GAS2L2Q8NHY3 880 aa20.17■□□□□ 0.82
GRAMD1B-212ENST00000633087 FHDC1Q9C0D6 1143 aaPredicted RBP20.17■□□□□ 0.82
GRAMD1B-212ENST00000633087 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
GRAMD1B-212ENST00000633087 MAP3K5Q99683 1374 aa20.17■□□□□ 0.82
GRAMD1B-212ENST00000633087 C4AP0C0L4 1744 aa20.16■□□□□ 0.82
GRAMD1B-212ENST00000633087 PHF14O94880 888 aa20.16■□□□□ 0.82
GRAMD1B-212ENST00000633087 GNPATO15228 680 aa20.15■□□□□ 0.82
GRAMD1B-212ENST00000633087 SLC4A9Q96Q91 983 aa20.15■□□□□ 0.82
GRAMD1B-212ENST00000633087 RSPH6AQ9H0K4 717 aa20.15■□□□□ 0.82
GRAMD1B-212ENST00000633087 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
GRAMD1B-212ENST00000633087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.14■□□□□ 0.81
GRAMD1B-212ENST00000633087 U2AF1L5P0DN76 240 aaPredicted RBP20.14■□□□□ 0.81
GRAMD1B-212ENST00000633087 PRKAR2BP31323 418 aa20.14■□□□□ 0.81
GRAMD1B-212ENST00000633087 U2AF1Q01081 240 aaKnown RBP eCLIP20.14■□□□□ 0.81
GRAMD1B-212ENST00000633087 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
GRAMD1B-212ENST00000633087 SYT17Q9BSW7 474 aa20.14■□□□□ 0.81
GRAMD1B-212ENST00000633087 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
GRAMD1B-212ENST00000633087 CNTNAP4Q9C0A0 1308 aa20.13■□□□□ 0.81
GRAMD1B-212ENST00000633087 DCAF8L1A6NGE4 600 aa20.13■□□□□ 0.81
GRAMD1B-212ENST00000633087 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
GRAMD1B-212ENST00000633087 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
GRAMD1B-212ENST00000633087 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
GRAMD1B-212ENST00000633087 MSL1Q68DK7 614 aa20.12■□□□□ 0.81
GRAMD1B-212ENST00000633087 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
GRAMD1B-212ENST00000633087 FCHSD2O94868 740 aa20.1■□□□□ 0.81
GRAMD1B-212ENST00000633087 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
GRAMD1B-212ENST00000633087 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
GRAMD1B-212ENST00000633087 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
GRAMD1B-212ENST00000633087 RTCBQ9Y3I0 505 aaKnown RBP20.1■□□□□ 0.81
GRAMD1B-212ENST00000633087 RALBP1Q15311 655 aa20.09■□□□□ 0.81
GRAMD1B-212ENST00000633087 SMIM5Q71RC9 77 aa20.09■□□□□ 0.81
GRAMD1B-212ENST00000633087 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
GRAMD1B-212ENST00000633087 CHD4Q14839 1912 aa20.09■□□□□ 0.81
GRAMD1B-212ENST00000633087 ADRA2BP18089 450 aa20.08■□□□□ 0.81
GRAMD1B-212ENST00000633087 TEFQ10587 303 aa20.08■□□□□ 0.81
GRAMD1B-212ENST00000633087 SLC39A6Q13433 755 aa20.07■□□□□ 0.8
GRAMD1B-212ENST00000633087 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
GRAMD1B-212ENST00000633087 CRKLP46109 303 aaKnown RBP20.06■□□□□ 0.8
GRAMD1B-212ENST00000633087 TRAPPC3LQ5T215 181 aa20.06■□□□□ 0.8
GRAMD1B-212ENST00000633087 IL17REQ8NFR9 667 aa20.06■□□□□ 0.8
GRAMD1B-212ENST00000633087 RPS6KA4O75676 772 aa20.05■□□□□ 0.8
GRAMD1B-212ENST00000633087 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
GRAMD1B-212ENST00000633087 NEFMP07197 916 aa20.04■□□□□ 0.8
GRAMD1B-212ENST00000633087 KIF13BQ9NQT8 1826 aa20.04■□□□□ 0.8
GRAMD1B-212ENST00000633087 DNAJC10Q8IXB1 793 aa20.03■□□□□ 0.8
GRAMD1B-212ENST00000633087 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
GRAMD1B-212ENST00000633087 MYBBP1AQ9BQG0 1328 aaKnown RBP20.02■□□□□ 0.8
GRAMD1B-212ENST00000633087 RFC4P35249 363 aa20.02■□□□□ 0.8
GRAMD1B-212ENST00000633087 VSIG10Q8N0Z9 540 aa20.02■□□□□ 0.8
GRAMD1B-212ENST00000633087 ARHGEF1Q92888 912 aaKnown RBP20.02■□□□□ 0.8
GRAMD1B-212ENST00000633087 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
GRAMD1B-212ENST00000633087 ZNF790Q6PG37 636 aa20■□□□□ 0.79
GRAMD1B-212ENST00000633087 NLGN2Q8NFZ4 835 aa20■□□□□ 0.79
GRAMD1B-212ENST00000633087 PNNQ9H307 717 aaKnown RBP20■□□□□ 0.79
GRAMD1B-212ENST00000633087 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
GRAMD1B-212ENST00000633087 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
GRAMD1B-212ENST00000633087 CYP19A1P11511 503 aaPredicted RBP19.99■□□□□ 0.79
GRAMD1B-212ENST00000633087 INTS5Q6P9B9 1019 aaKnown RBP19.99■□□□□ 0.79
GRAMD1B-212ENST00000633087 CD2APQ9Y5K6 639 aa19.99■□□□□ 0.79
GRAMD1B-212ENST00000633087 KDM3BQ7LBC6 1761 aa19.98■□□□□ 0.79
GRAMD1B-212ENST00000633087 UTRNP46939 3433 aa19.98■□□□□ 0.79
GRAMD1B-212ENST00000633087 BTBD11A6QL63 1104 aa19.98■□□□□ 0.79
GRAMD1B-212ENST00000633087 MCM10Q7L590 875 aa19.98■□□□□ 0.79
GRAMD1B-212ENST00000633087 NLGN1Q8N2Q7 840 aa19.98■□□□□ 0.79
GRAMD1B-212ENST00000633087 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
GRAMD1B-212ENST00000633087 LAMB4A4D0S4 1761 aa19.98■□□□□ 0.79
GRAMD1B-212ENST00000633087 MMP10P09238 476 aa19.97■□□□□ 0.79
GRAMD1B-212ENST00000633087 GYS1P13807 737 aa19.97■□□□□ 0.79
GRAMD1B-212ENST00000633087 ZNF496Q96IT1 587 aaPredicted RBP19.97■□□□□ 0.79
GRAMD1B-212ENST00000633087 PLEKHF1Q96S99 279 aa19.97■□□□□ 0.79
GRAMD1B-212ENST00000633087 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
GRAMD1B-212ENST00000633087 USP42Q9H9J4 1324 aaKnown RBP19.97■□□□□ 0.79
GRAMD1B-212ENST00000633087 COL15A1P39059 1388 aa19.96■□□□□ 0.79
GRAMD1B-212ENST00000633087 KIAA1551Q9HCM1 1747 aa19.96■□□□□ 0.79
GRAMD1B-212ENST00000633087 GPR162Q16538 588 aa19.96■□□□□ 0.79
GRAMD1B-212ENST00000633087 FMNL2Q96PY5 1086 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms