RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
PDLIM3-213ENST00000629667 KIF13BQ9NQT8 1826 aa21.63■■□□□ 1.05
PDLIM3-213ENST00000629667 N4BP2Q86UW6 1770 aaPredicted RBP21.62■■□□□ 1.05
PDLIM3-213ENST00000629667 TRAPPC3LQ5T215 181 aa21.61■■□□□ 1.05
PDLIM3-213ENST00000629667 RTCBQ9Y3I0 505 aaKnown RBP21.61■■□□□ 1.05
PDLIM3-213ENST00000629667 CICQ96RK0 1608 aaPredicted RBP21.6■■□□□ 1.05
PDLIM3-213ENST00000629667 EIF4A2Q14240 407 aaKnown RBP21.6■■□□□ 1.05
PDLIM3-213ENST00000629667 TNNT2P45379 298 aaPredicted RBP21.59■■□□□ 1.05
PDLIM3-213ENST00000629667 NLGN1Q8N2Q7 840 aa21.59■■□□□ 1.05
PDLIM3-213ENST00000629667 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
PDLIM3-213ENST00000629667 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.05
PDLIM3-213ENST00000629667 KIAA1551Q9HCM1 1747 aa21.58■■□□□ 1.05
PDLIM3-213ENST00000629667 KIF3CO14782 793 aa21.58■■□□□ 1.05
PDLIM3-213ENST00000629667 TGFB2P61812 414 aa21.58■■□□□ 1.05
PDLIM3-213ENST00000629667 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
PDLIM3-213ENST00000629667 ZNF831Q5JPB2 1677 aa21.58■■□□□ 1.05
PDLIM3-213ENST00000629667 ERVV-2B6SEH9 535 aa21.57■■□□□ 1.04
PDLIM3-213ENST00000629667 BCS1LQ9Y276 419 aa21.57■■□□□ 1.04
PDLIM3-213ENST00000629667 KDRP35968 1356 aa21.57■■□□□ 1.04
PDLIM3-213ENST00000629667 PLEKHG2Q9H7P9 1386 aa21.57■■□□□ 1.04
PDLIM3-213ENST00000629667 COL5A3P25940 1745 aaPredicted RBP21.57■■□□□ 1.04
PDLIM3-213ENST00000629667 HSP90AB1P08238 724 aaKnown RBP21.56■■□□□ 1.04
PDLIM3-213ENST00000629667 A0A0G2JLW4 131 aa21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 ADRA2BP18089 450 aa21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 RC3H1Q5TC82 1133 aaKnown RBP21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 ARHGEF1Q92888 912 aaKnown RBP21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 DCAF5Q96JK2 942 aa21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 SLC4A9Q96Q91 983 aa21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 CCDC87Q9NVE4 849 aa21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
PDLIM3-213ENST00000629667 RFC4P35249 363 aa21.54■■□□□ 1.04
PDLIM3-213ENST00000629667 C10orf71Q711Q0 1435 aa21.54■■□□□ 1.04
PDLIM3-213ENST00000629667 PLEKHO1Q53GL0 409 aaPredicted RBP21.53■■□□□ 1.04
PDLIM3-213ENST00000629667 ARHGAP27Q6ZUM4 889 aa21.53■■□□□ 1.04
PDLIM3-213ENST00000629667 CNTNAP4Q9C0A0 1308 aa21.53■■□□□ 1.04
PDLIM3-213ENST00000629667 BRCA1P38398 1863 aaKnown RBP21.52■■□□□ 1.04
PDLIM3-213ENST00000629667 GYS1P13807 737 aa21.52■■□□□ 1.04
PDLIM3-213ENST00000629667 CABP4P57796 275 aa21.52■■□□□ 1.04
PDLIM3-213ENST00000629667 PARP3Q9Y6F1 533 aa21.52■■□□□ 1.04
PDLIM3-213ENST00000629667 MYH14Q7Z406 1995 aaKnown RBP21.52■■□□□ 1.04
PDLIM3-213ENST00000629667 RPS6KA4O75676 772 aa21.51■■□□□ 1.03
PDLIM3-213ENST00000629667 FCHSD2O94868 740 aa21.51■■□□□ 1.03
PDLIM3-213ENST00000629667 TIMELESSQ9UNS1 1208 aa21.51■■□□□ 1.03
PDLIM3-213ENST00000629667 TOMM70O94826 608 aa21.5■■□□□ 1.03
PDLIM3-213ENST00000629667 DPEP1P16444 411 aa21.5■■□□□ 1.03
PDLIM3-213ENST00000629667 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
PDLIM3-213ENST00000629667 AMOTQ4VCS5 1084 aa21.5■■□□□ 1.03
PDLIM3-213ENST00000629667 ZNF530Q6P9A1 599 aaPredicted RBP21.5■■□□□ 1.03
PDLIM3-213ENST00000629667 KDM6AO15550 1401 aaPredicted RBP21.49■■□□□ 1.03
PDLIM3-213ENST00000629667 APLP1P51693 650 aa21.49■■□□□ 1.03
PDLIM3-213ENST00000629667 ARFGEF1Q9Y6D6 1849 aa21.48■■□□□ 1.03
PDLIM3-213ENST00000629667 MTHFSP49914 203 aa21.48■■□□□ 1.03
PDLIM3-213ENST00000629667 PTCD1O75127 700 aaKnown RBP21.47■■□□□ 1.03
PDLIM3-213ENST00000629667 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
PDLIM3-213ENST00000629667 NMRK2Q9NPI5 230 aa21.45■■□□□ 1.02
PDLIM3-213ENST00000629667 CRKLP46109 303 aaKnown RBP21.44■■□□□ 1.02
PDLIM3-213ENST00000629667 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
PDLIM3-213ENST00000629667 PANK3Q9H999 370 aa21.44■■□□□ 1.02
PDLIM3-213ENST00000629667 PIM2Q9P1W9 311 aa21.44■■□□□ 1.02
PDLIM3-213ENST00000629667 KCNA3P22001 575 aa21.43■■□□□ 1.02
PDLIM3-213ENST00000629667 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
PDLIM3-213ENST00000629667 TJP1Q07157 1748 aa21.42■■□□□ 1.02
PDLIM3-213ENST00000629667 C9orf131Q5VYM1 1079 aa21.42■■□□□ 1.02
PDLIM3-213ENST00000629667 SRP68Q9UHB9 627 aaKnown RBP21.42■■□□□ 1.02
PDLIM3-213ENST00000629667 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
PDLIM3-213ENST00000629667 USP42Q9H9J4 1324 aaKnown RBP21.41■■□□□ 1.02
PDLIM3-213ENST00000629667 FKBP8Q14318 412 aa21.41■■□□□ 1.02
PDLIM3-213ENST00000629667 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
PDLIM3-213ENST00000629667 MORC1Q86VD1 984 aa21.41■■□□□ 1.02
PDLIM3-213ENST00000629667 C16orf71Q8IYS4 520 aaPredicted RBP21.41■■□□□ 1.02
PDLIM3-213ENST00000629667 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
PDLIM3-213ENST00000629667 WDR90Q96KV7 1748 aa21.39■■□□□ 1.01
PDLIM3-213ENST00000629667 EIF4G2P78344 907 aaKnown RBP eCLIP21.39■■□□□ 1.01
PDLIM3-213ENST00000629667 DNAJC5GQ8N7S2 189 aa21.39■■□□□ 1.01
PDLIM3-213ENST00000629667 DDR1Q08345 913 aa21.38■■□□□ 1.01
PDLIM3-213ENST00000629667 RBM46Q8TBY0 533 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-213ENST00000629667 SBF1O95248 1867 aa21.37■■□□□ 1.01
PDLIM3-213ENST00000629667 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
PDLIM3-213ENST00000629667 RNF181Q9P0P0 153 aa21.37■■□□□ 1.01
PDLIM3-213ENST00000629667 ZPR1O75312 459 aa21.36■■□□□ 1.01
PDLIM3-213ENST00000629667 CHRNA5P30532 468 aa21.36■■□□□ 1.01
PDLIM3-213ENST00000629667 INTS5Q6P9B9 1019 aaKnown RBP21.36■■□□□ 1.01
PDLIM3-213ENST00000629667 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
PDLIM3-213ENST00000629667 CLSPNQ9HAW4 1339 aa21.35■■□□□ 1.01
PDLIM3-213ENST00000629667 ADAMTS7Q9UKP4 1686 aa21.35■■□□□ 1.01
PDLIM3-213ENST00000629667 VIRMAQ69YN4 1812 aaKnown RBP21.35■■□□□ 1.01
PDLIM3-213ENST00000629667 HSPA5P11021 654 aaKnown RBP21.35■■□□□ 1.01
PDLIM3-213ENST00000629667 POLRMTO00411 1230 aaKnown RBP21.34■■□□□ 1.01
PDLIM3-213ENST00000629667 TM4SF1P30408 202 aa21.33■■□□□ 1.01
PDLIM3-213ENST00000629667 IL13P35225 146 aa21.33■■□□□ 1.01
PDLIM3-213ENST00000629667 FSTL1Q12841 308 aa21.33■■□□□ 1.01
PDLIM3-213ENST00000629667 AKAP4Q5JQC9 854 aa21.33■■□□□ 1.01
PDLIM3-213ENST00000629667 USPL1Q5W0Q7 1092 aa21.33■■□□□ 1.01
PDLIM3-213ENST00000629667 DNAJC10Q8IXB1 793 aa21.33■■□□□ 1.01
PDLIM3-213ENST00000629667 TNRC6CQ9HCJ0 1690 aaKnown RBP21.33■■□□□ 1
PDLIM3-213ENST00000629667 AFDNP55196 1824 aaKnown RBP21.32■■□□□ 1
PDLIM3-213ENST00000629667 PCGF6Q9BYE7 350 aa21.32■■□□□ 1
PDLIM3-213ENST00000629667 SLC52A2Q9HAB3 445 aa21.32■■□□□ 1
PDLIM3-213ENST00000629667 RRAGCQ9HB90 399 aa21.32■■□□□ 1
PDLIM3-213ENST00000629667 KNSTRNQ9Y448 316 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms