RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ANAPC15P60006 121 aa13.75□□□□□ -0.21
SHPRH-211ENST00000629427 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
SHPRH-211ENST00000629427 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
SHPRH-211ENST00000629427 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
SHPRH-211ENST00000629427 NAPBQ9H115 298 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 NUP62CLQ9H1M0 184 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
SHPRH-211ENST00000629427 UBA5Q9GZZ9 404 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
SHPRH-211ENST00000629427 EXOC6BQ9Y2D4 811 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 DUSP27Q5VZP5 1158 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC112Q8NEF3 446 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 BOLA2Q9H3K6 86 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 MCM10Q7L590 875 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 TAF3Q5VWG9 929 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 TAF4BQ92750 862 aa13.73□□□□□ -0.21
SHPRH-211ENST00000629427 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 FCHSD2O94868 740 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 KIF1BPQ96EK5 621 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 CUL5Q93034 780 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 GOLGA6L7A0A1B0GV03 622 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 IFIT5Q13325 482 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 LARP1Q6PKG0 1096 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 EIF3JO75822 258 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC150Q8NCX0 1101 aa13.72□□□□□ -0.21
SHPRH-211ENST00000629427 CETN2P41208 172 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CFAP100Q494V2 611 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 ERLIN1O75477 346 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 TSG101Q99816 390 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC66A2RUB6 948 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 CAMK4Q16566 473 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 FILIP1Q7Z7B0 1213 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 NGLY1Q96IV0 654 aa13.71□□□□□ -0.21
SHPRH-211ENST00000629427 SLC5A1P13866 664 aa13.71□□□□□ -0.22
SHPRH-211ENST00000629427 MAP3K12Q12852 859 aa13.71□□□□□ -0.22
SHPRH-211ENST00000629427 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.22
SHPRH-211ENST00000629427 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 IQCA1Q86XH1 822 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
SHPRH-211ENST00000629427 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-211ENST00000629427 LIG1P18858 919 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CACNA2D4Q7Z3S7 1137 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 DRC1Q96MC2 740 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 ZNF213O14771 459 aa13.69□□□□□ -0.22
SHPRH-211ENST00000629427 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-211ENST00000629427 CTCFLQ8NI51 663 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-211ENST00000629427 SPA17Q15506 151 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 ARHGAP29Q52LW3 1261 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 TRMT1LQ7Z2T5 733 aaKnown RBP13.68□□□□□ -0.22
SHPRH-211ENST00000629427 THUMPD2Q9BTF0 503 aaKnown RBP13.68□□□□□ -0.22
SHPRH-211ENST00000629427 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
SHPRH-211ENST00000629427 EHMT1Q9H9B1 1298 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 FKBP15Q5T1M5 1219 aa13.68□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC91Q7Z6B0 441 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 RAB34Q9BZG1 259 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 GPTP24298 496 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 TMEM266Q2M3C6 531 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 AMOTQ4VCS5 1084 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 RPAP2Q8IXW5 612 aaPredicted RBP13.67□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC113Q9H0I3 377 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
SHPRH-211ENST00000629427 FEZ1Q99689 392 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 ANKRD18BA2A2Z9 1011 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 CCDC102AQ96A19 550 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
SHPRH-211ENST00000629427 NLRP5P59047 1200 aa13.66□□□□□ -0.22
SHPRH-211ENST00000629427 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
SHPRH-211ENST00000629427 GRPEL1Q9HAV7 217 aa13.66□□□□□ -0.22
SHPRH-211ENST00000629427 FGFR1OPO95684 399 aaKnown RBP13.66□□□□□ -0.22
SHPRH-211ENST00000629427 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
SHPRH-211ENST00000629427 CTNNBL1Q8WYA6 563 aaPredicted RBP13.66□□□□□ -0.22
SHPRH-211ENST00000629427 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms