RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
CHD2-218ENST00000629346 TMF1P82094 1093 aa16.91■□□□□ 0.3
CHD2-218ENST00000629346 C10orf71Q711Q0 1435 aa16.9■□□□□ 0.3
CHD2-218ENST00000629346 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
CHD2-218ENST00000629346 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
CHD2-218ENST00000629346 ITGB4P16144 1822 aa16.89■□□□□ 0.29
CHD2-218ENST00000629346 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
CHD2-218ENST00000629346 KCNA3P22001 575 aa16.89■□□□□ 0.29
CHD2-218ENST00000629346 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.29
CHD2-218ENST00000629346 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
CHD2-218ENST00000629346 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
CHD2-218ENST00000629346 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
CHD2-218ENST00000629346 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
CHD2-218ENST00000629346 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
CHD2-218ENST00000629346 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
CHD2-218ENST00000629346 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
CHD2-218ENST00000629346 RTL1A6NKG5 1358 aa16.87■□□□□ 0.29
CHD2-218ENST00000629346 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
CHD2-218ENST00000629346 TMOD3Q9NYL9 352 aa16.86■□□□□ 0.29
CHD2-218ENST00000629346 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
CHD2-218ENST00000629346 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
CHD2-218ENST00000629346 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
CHD2-218ENST00000629346 GYS1P13807 737 aa16.84■□□□□ 0.29
CHD2-218ENST00000629346 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
CHD2-218ENST00000629346 TNRC6CQ9HCJ0 1690 aaKnown RBP16.84■□□□□ 0.29
CHD2-218ENST00000629346 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
CHD2-218ENST00000629346 RFC4P35249 363 aa16.83■□□□□ 0.28
CHD2-218ENST00000629346 BRCA1P38398 1863 aaKnown RBP16.83■□□□□ 0.28
CHD2-218ENST00000629346 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
CHD2-218ENST00000629346 GGNBP2Q9H3C7 697 aa16.83■□□□□ 0.28
CHD2-218ENST00000629346 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
CHD2-218ENST00000629346 CHRNA5P30532 468 aa16.82■□□□□ 0.28
CHD2-218ENST00000629346 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
CHD2-218ENST00000629346 ATG3Q9NT62 314 aa16.82■□□□□ 0.28
CHD2-218ENST00000629346 ARFGEF1Q9Y6D6 1849 aa16.82■□□□□ 0.28
CHD2-218ENST00000629346 RASSF7Q02833 373 aa16.81■□□□□ 0.28
CHD2-218ENST00000629346 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
CHD2-218ENST00000629346 SPG7Q9UQ90 795 aa16.81■□□□□ 0.28
CHD2-218ENST00000629346 INSRP06213 1382 aa16.8■□□□□ 0.28
CHD2-218ENST00000629346 MKRN1Q9UHC7 482 aaKnown RBP16.8■□□□□ 0.28
CHD2-218ENST00000629346 GLTPD2A6NH11 291 aa16.78■□□□□ 0.28
CHD2-218ENST00000629346 FYB1O15117 783 aa16.78■□□□□ 0.28
CHD2-218ENST00000629346 FOXN1O15353 648 aa16.78■□□□□ 0.28
CHD2-218ENST00000629346 ADRA2BP18089 450 aa16.78■□□□□ 0.28
CHD2-218ENST00000629346 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
CHD2-218ENST00000629346 RPS6KA4O75676 772 aa16.77■□□□□ 0.28
CHD2-218ENST00000629346 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.28
CHD2-218ENST00000629346 SBF1O95248 1867 aa16.77■□□□□ 0.27
CHD2-218ENST00000629346 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
CHD2-218ENST00000629346 SRP68Q9UHB9 627 aaKnown RBP16.76■□□□□ 0.27
CHD2-218ENST00000629346 FLT4P35916 1363 aa16.76■□□□□ 0.27
CHD2-218ENST00000629346 DDR1Q08345 913 aa16.75■□□□□ 0.27
CHD2-218ENST00000629346 FKBP8Q14318 412 aa16.75■□□□□ 0.27
CHD2-218ENST00000629346 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
CHD2-218ENST00000629346 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
CHD2-218ENST00000629346 IFNL2Q8IZJ0 200 aa16.75■□□□□ 0.27
CHD2-218ENST00000629346 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
CHD2-218ENST00000629346 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
CHD2-218ENST00000629346 PHKG2P15735 406 aa16.74■□□□□ 0.27
CHD2-218ENST00000629346 LMNB1P20700 586 aa16.74■□□□□ 0.27
CHD2-218ENST00000629346 KDRP35968 1356 aa16.74■□□□□ 0.27
CHD2-218ENST00000629346 PRDM10Q9NQV6 1147 aa16.73■□□□□ 0.27
CHD2-218ENST00000629346 EMILIN1Q9Y6C2 1016 aa16.73■□□□□ 0.27
CHD2-218ENST00000629346 CNTNAP4Q9C0A0 1308 aa16.72■□□□□ 0.27
CHD2-218ENST00000629346 POTECB2RU33 542 aa16.72■□□□□ 0.27
CHD2-218ENST00000629346 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
CHD2-218ENST00000629346 AIDAQ96BJ3 306 aa16.71■□□□□ 0.27
CHD2-218ENST00000629346 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
CHD2-218ENST00000629346 CTCFP49711 727 aaPredicted RBP16.7■□□□□ 0.26
CHD2-218ENST00000629346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.7■□□□□ 0.263e-16■□□□□ 9.1
CHD2-218ENST00000629346 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
CHD2-218ENST00000629346 POLRMTO00411 1230 aaKnown RBP16.69■□□□□ 0.26
CHD2-218ENST00000629346 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
CHD2-218ENST00000629346 EYA1Q99502 592 aa16.69■□□□□ 0.26
CHD2-218ENST00000629346 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
CHD2-218ENST00000629346 KIF24Q5T7B8 1368 aa16.68■□□□□ 0.26
CHD2-218ENST00000629346 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
CHD2-218ENST00000629346 CRKLP46109 303 aaKnown RBP16.68■□□□□ 0.26
CHD2-218ENST00000629346 LBX1P52954 281 aa16.68■□□□□ 0.26
CHD2-218ENST00000629346 CHADLQ6NUI6 762 aa16.68■□□□□ 0.26
CHD2-218ENST00000629346 ABHD8Q96I13 439 aa16.68■□□□□ 0.26
CHD2-218ENST00000629346 TESK2Q96S53 571 aa16.68■□□□□ 0.26
CHD2-218ENST00000629346 ST20-MTHFSA0A0A6YYL1 179 aa16.67■□□□□ 0.26
CHD2-218ENST00000629346 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
CHD2-218ENST00000629346 POTEJP0CG39 1038 aa16.67■□□□□ 0.26
CHD2-218ENST00000629346 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
CHD2-218ENST00000629346 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
CHD2-218ENST00000629346 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
CHD2-218ENST00000629346 MYH14Q7Z406 1995 aaKnown RBP16.66■□□□□ 0.26
CHD2-218ENST00000629346 ERVV-2B6SEH9 535 aa16.66■□□□□ 0.26
CHD2-218ENST00000629346 TM4SF1P30408 202 aa16.66■□□□□ 0.26
CHD2-218ENST00000629346 NCAPD2Q15021 1401 aa16.66■□□□□ 0.26
CHD2-218ENST00000629346 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
CHD2-218ENST00000629346 NFKBIEO00221 500 aa16.65■□□□□ 0.26
CHD2-218ENST00000629346 VEGFBP49765 207 aa16.65■□□□□ 0.26
CHD2-218ENST00000629346 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
CHD2-218ENST00000629346 CABP4P57796 275 aa16.64■□□□□ 0.25
CHD2-218ENST00000629346 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
CHD2-218ENST00000629346 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
CHD2-218ENST00000629346 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms