RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
VPS8-227ENST00000625842 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
VPS8-227ENST00000625842 CDC45O75419 566 aa13.09□□□□□ -0.31
VPS8-227ENST00000625842 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
VPS8-227ENST00000625842 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
VPS8-227ENST00000625842 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
VPS8-227ENST00000625842 IDI1Q13907 227 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 APBB1IPQ7Z5R6 666 aaPredicted RBP13.08□□□□□ -0.32
VPS8-227ENST00000625842 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
VPS8-227ENST00000625842 RXRBP28702 533 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 BMS1Q14692 1282 aaKnown RBP13.08□□□□□ -0.32
VPS8-227ENST00000625842 SDF4Q9BRK5 362 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 USP21Q9UK80 565 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 BAG4O95429 457 aaKnown RBP13.08□□□□□ -0.32
VPS8-227ENST00000625842 GCC1Q96CN9 775 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
VPS8-227ENST00000625842 DHX8Q14562 1220 aaKnown RBP13.07□□□□□ -0.32
VPS8-227ENST00000625842 MVPQ14764 893 aaKnown RBP13.07□□□□□ -0.32
VPS8-227ENST00000625842 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
VPS8-227ENST00000625842 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 DHX29Q7Z478 1369 aaKnown RBP13.07□□□□□ -0.32
VPS8-227ENST00000625842 ATP2B1P20020 1258 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 PDE4BQ07343 736 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 ZNHIT6Q9NWK9 470 aaKnown RBP13.07□□□□□ -0.32
VPS8-227ENST00000625842 SLC5A4Q9NY91 659 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 WDR7Q9Y4E6 1490 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 NUCB2P80303 420 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 STXBP4Q6ZWJ1 553 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 FAM13BQ9NYF5 915 aa13.07□□□□□ -0.32
VPS8-227ENST00000625842 LRRC9Q6ZRR7 1453 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 NAIPQ13075 1403 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 UQCRFS1P1P0C7P4 283 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 FBXO31Q5XUX0 539 aaPredicted RBP13.06□□□□□ -0.32
VPS8-227ENST00000625842 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
VPS8-227ENST00000625842 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
VPS8-227ENST00000625842 IVNS1ABPQ9Y6Y0 642 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 SIL1Q9H173 461 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 NOD1Q9Y239 953 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
VPS8-227ENST00000625842 NAPBQ9H115 298 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 SSFA2P28290 1259 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
VPS8-227ENST00000625842 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
VPS8-227ENST00000625842 APBA3O96018 575 aa13.05□□□□□ -0.32
VPS8-227ENST00000625842 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
VPS8-227ENST00000625842 H0YIN7 160 aa13.05□□□□□ -0.32
VPS8-227ENST00000625842 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
VPS8-227ENST00000625842 SRGAP3O43295 1099 aa13.05□□□□□ -0.32
VPS8-227ENST00000625842 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
VPS8-227ENST00000625842 ANKRD2Q9GZV1 360 aa13.05□□□□□ -0.32
VPS8-227ENST00000625842 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
VPS8-227ENST00000625842 AACSQ86V21 672 aa13.04□□□□□ -0.32
VPS8-227ENST00000625842 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
VPS8-227ENST00000625842 KIF5BP33176 963 aa13.04□□□□□ -0.32
VPS8-227ENST00000625842 WDR63Q8IWG1 891 aa13.04□□□□□ -0.32
VPS8-227ENST00000625842 CCDC117Q8IWD4 279 aaPredicted RBP13.04□□□□□ -0.32
VPS8-227ENST00000625842 STK38Q15208 465 aa13.04□□□□□ -0.32
VPS8-227ENST00000625842 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
VPS8-227ENST00000625842 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
VPS8-227ENST00000625842 UTP14AQ9BVJ6 771 aaKnown RBP13.03□□□□□ -0.32
VPS8-227ENST00000625842 CRNKL1Q9BZJ0 848 aaKnown RBP13.03□□□□□ -0.32
VPS8-227ENST00000625842 SPC25Q9HBM1 224 aa13.03□□□□□ -0.32
VPS8-227ENST00000625842 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
VPS8-227ENST00000625842 GLRX3O76003 335 aaKnown RBP13.03□□□□□ -0.32
VPS8-227ENST00000625842 KCNA6P17658 529 aa13.03□□□□□ -0.32
VPS8-227ENST00000625842 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
VPS8-227ENST00000625842 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
VPS8-227ENST00000625842 LRRC45Q96CN5 670 aa13.03□□□□□ -0.32
VPS8-227ENST00000625842 GPHNQ9NQX3 736 aaPredicted RBP13.03□□□□□ -0.32
VPS8-227ENST00000625842 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
VPS8-227ENST00000625842 PABPN1LA6NDY0 278 aaKnown RBP13.02□□□□□ -0.32
VPS8-227ENST00000625842 H7C1D1 291 aa13.02□□□□□ -0.32
VPS8-227ENST00000625842 KINO60870 393 aaKnown RBP13.02□□□□□ -0.32
VPS8-227ENST00000625842 MYD88Q99836 296 aa13.02□□□□□ -0.32
VPS8-227ENST00000625842 CYP46A1Q9Y6A2 500 aa13.02□□□□□ -0.32
VPS8-227ENST00000625842 RAB11FIP3O75154 756 aa13.02□□□□□ -0.32
VPS8-227ENST00000625842 LDHAL6AQ6ZMR3 332 aa13.02□□□□□ -0.32
VPS8-227ENST00000625842 NCKAP5LQ9HCH0 1330 aa13.02□□□□□ -0.32
VPS8-227ENST00000625842 ASXL2Q76L83 1435 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 ERLIN2O94905 339 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 CETN1Q12798 172 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 TAF12Q16514 161 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 PICK1Q9NRD5 415 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 TBX22Q9Y458 520 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 MAST3O60307 1309 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.33
VPS8-227ENST00000625842 USP37Q86T82 979 aa13.01□□□□□ -0.33
VPS8-227ENST00000625842 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
VPS8-227ENST00000625842 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
VPS8-227ENST00000625842 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
VPS8-227ENST00000625842 CCAR2Q8N163 923 aaKnown RBP13.01□□□□□ -0.33
VPS8-227ENST00000625842 RUFY1Q96T51 708 aa13.01□□□□□ -0.33
VPS8-227ENST00000625842 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
VPS8-227ENST00000625842 BRD4O60885 1362 aaPredicted RBP13.01□□□□□ -0.33
VPS8-227ENST00000625842 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms