RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
VARS2-213ENST00000625423 PNMA6EA0A0J9YXQ4 647 aa13.82□□□□□ -0.2
VARS2-213ENST00000625423 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
VARS2-213ENST00000625423 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
VARS2-213ENST00000625423 CLCN1P35523 988 aa13.81□□□□□ -0.2
VARS2-213ENST00000625423 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
VARS2-213ENST00000625423 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
VARS2-213ENST00000625423 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
VARS2-213ENST00000625423 GNAI3P08754 354 aa13.8□□□□□ -0.2
VARS2-213ENST00000625423 TBX22Q9Y458 520 aa13.8□□□□□ -0.2
VARS2-213ENST00000625423 AK9Q5TCS8 1911 aa13.8□□□□□ -0.2
VARS2-213ENST00000625423 LTV1Q96GA3 475 aaPredicted RBP13.8□□□□□ -0.2
VARS2-213ENST00000625423 SALL3Q9BXA9 1300 aa13.8□□□□□ -0.2
VARS2-213ENST00000625423 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
VARS2-213ENST00000625423 HOXC9P31274 260 aa13.79□□□□□ -0.2
VARS2-213ENST00000625423 ATP8B2P98198 1209 aa13.79□□□□□ -0.2
VARS2-213ENST00000625423 IL17REQ8NFR9 667 aa13.79□□□□□ -0.2
VARS2-213ENST00000625423 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
VARS2-213ENST00000625423 MX1P20591 662 aa13.79□□□□□ -0.2
VARS2-213ENST00000625423 LMBRD1Q9NUN5 540 aa13.79□□□□□ -0.2
VARS2-213ENST00000625423 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
VARS2-213ENST00000625423 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 NEK4P51957 841 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 RILPL2Q969X0 211 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 ESYT1Q9BSJ8 1104 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 LRRFIP2Q9Y608 721 aaKnown RBP13.78□□□□□ -0.2
VARS2-213ENST00000625423 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 ESPNB1AK53 854 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 DIP2AQ14689 1571 aa13.78□□□□□ -0.2
VARS2-213ENST00000625423 TRIM6-TRIM34B2RNG4 842 aa13.77□□□□□ -0.2
VARS2-213ENST00000625423 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
VARS2-213ENST00000625423 IBTKQ9P2D0 1353 aaPredicted RBP13.77□□□□□ -0.21
VARS2-213ENST00000625423 NASPP49321 788 aaPredicted RBP13.77□□□□□ -0.21
VARS2-213ENST00000625423 TAF7Q15545 349 aaPredicted RBP13.77□□□□□ -0.21
VARS2-213ENST00000625423 PIK3C2AO00443 1686 aa13.77□□□□□ -0.21
VARS2-213ENST00000625423 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
VARS2-213ENST00000625423 PRPF40AO75400 957 aaKnown RBP13.76□□□□□ -0.21
VARS2-213ENST00000625423 USHBP1Q8N6Y0 703 aa13.76□□□□□ -0.21
VARS2-213ENST00000625423 ABTB2Q8N961 1025 aa13.76□□□□□ -0.21
VARS2-213ENST00000625423 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
VARS2-213ENST00000625423 CHAMP1Q96JM3 812 aa13.76□□□□□ -0.21
VARS2-213ENST00000625423 USP44Q9H0E7 712 aa13.76□□□□□ -0.21
VARS2-213ENST00000625423 PALD1Q9ULE6 856 aa13.76□□□□□ -0.21
VARS2-213ENST00000625423 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
VARS2-213ENST00000625423 CHMLP26374 656 aa13.75□□□□□ -0.21
VARS2-213ENST00000625423 TMX3Q96JJ7 454 aa13.75□□□□□ -0.21
VARS2-213ENST00000625423 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
VARS2-213ENST00000625423 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
VARS2-213ENST00000625423 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
VARS2-213ENST00000625423 PHAXQ9H814 394 aaKnown RBP13.75□□□□□ -0.21
VARS2-213ENST00000625423 ZSCAN23Q3MJ62 389 aa13.75□□□□□ -0.21
VARS2-213ENST00000625423 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
VARS2-213ENST00000625423 UBTFL1P0CB47 393 aaPredicted RBP13.74□□□□□ -0.21
VARS2-213ENST00000625423 C14orf37Q86TY3 774 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 NAP1L5Q96NT1 182 aaPredicted RBP13.74□□□□□ -0.21
VARS2-213ENST00000625423 IL1RAPL2Q9NP60 686 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 HDGFL1Q5TGJ6 251 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 STAP2Q9UGK3 403 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 SLIT1O75093 1534 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 KCNA6P17658 529 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 MCCP23508 829 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 ZNF445P59923 1031 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 NOL8Q76FK4 1167 aaKnown RBP13.74□□□□□ -0.21
VARS2-213ENST00000625423 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
VARS2-213ENST00000625423 CCDC173Q0VFZ6 552 aa13.73□□□□□ -0.21
VARS2-213ENST00000625423 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
VARS2-213ENST00000625423 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
VARS2-213ENST00000625423 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
VARS2-213ENST00000625423 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
VARS2-213ENST00000625423 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
VARS2-213ENST00000625423 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
VARS2-213ENST00000625423 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
VARS2-213ENST00000625423 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
VARS2-213ENST00000625423 EIF2S2P20042 333 aaKnown RBP13.72□□□□□ -0.21
VARS2-213ENST00000625423 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
VARS2-213ENST00000625423 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
VARS2-213ENST00000625423 ANP32BQ92688 251 aaKnown RBP13.72□□□□□ -0.21
VARS2-213ENST00000625423 PPP1R9BQ96SB3 815 aa13.72□□□□□ -0.21
VARS2-213ENST00000625423 MCM2P49736 904 aa13.71□□□□□ -0.21
VARS2-213ENST00000625423 SSH3Q8TE77 659 aa13.71□□□□□ -0.21
VARS2-213ENST00000625423 IL25Q9H293 177 aa13.71□□□□□ -0.21
VARS2-213ENST00000625423 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.21
VARS2-213ENST00000625423 SURF6O75683 361 aaKnown RBP13.71□□□□□ -0.22
VARS2-213ENST00000625423 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.22
VARS2-213ENST00000625423 ANAPC15P60006 121 aa13.71□□□□□ -0.22
VARS2-213ENST00000625423 UPF3BQ9BZI7 483 aaKnown RBP13.71□□□□□ -0.22
VARS2-213ENST00000625423 ANKARQ7Z5J8 1434 aa13.7□□□□□ -0.22
VARS2-213ENST00000625423 CUL4AQ13619 759 aa13.7□□□□□ -0.22
VARS2-213ENST00000625423 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
VARS2-213ENST00000625423 RBSNQ9H1K0 784 aa13.7□□□□□ -0.22
VARS2-213ENST00000625423 LGR6Q9HBX8 967 aa13.69□□□□□ -0.22
VARS2-213ENST00000625423 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
VARS2-213ENST00000625423 PXDNLA1KZ92 1463 aa13.69□□□□□ -0.22
VARS2-213ENST00000625423 BRD1O95696 1058 aa13.69□□□□□ -0.22
VARS2-213ENST00000625423 AOX1Q06278 1338 aa13.69□□□□□ -0.22
VARS2-213ENST00000625423 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
VARS2-213ENST00000625423 POLA2Q14181 598 aa13.68□□□□□ -0.22
VARS2-213ENST00000625423 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms