RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 IL17REQ8NFR9 667 aa26.01■■□□□ 1.75
PDLIM2-221ENST00000622702 SALL2Q9Y467 1007 aaPredicted RBP26.01■■□□□ 1.75
PDLIM2-221ENST00000622702 CEMIPQ8WUJ3 1361 aa26■■□□□ 1.75
PDLIM2-221ENST00000622702 ZNF521Q96K83 1311 aa25.99■■□□□ 1.75
PDLIM2-221ENST00000622702 RNMTO43148 476 aaKnown RBP25.99■■□□□ 1.75
PDLIM2-221ENST00000622702 DCTN1Q14203 1278 aa25.98■■□□□ 1.75
PDLIM2-221ENST00000622702 MCM10Q7L590 875 aa25.98■■□□□ 1.75
PDLIM2-221ENST00000622702 PROM2Q8N271 834 aa25.98■■□□□ 1.75
PDLIM2-221ENST00000622702 LGR6Q9HBX8 967 aa25.98■■□□□ 1.75
PDLIM2-221ENST00000622702 SCN11AQ9UI33 1791 aa25.98■■□□□ 1.75
PDLIM2-221ENST00000622702 ZBED9Q6R2W3 1325 aa25.98■■□□□ 1.75
PDLIM2-221ENST00000622702 TXNRD1Q16881 649 aa25.98■■□□□ 1.75
PDLIM2-221ENST00000622702 NUP188Q5SRE5 1749 aa25.97■■□□□ 1.75
PDLIM2-221ENST00000622702 TMOD3Q9NYL9 352 aa25.97■■□□□ 1.75
PDLIM2-221ENST00000622702 ERVV-2B6SEH9 535 aa25.96■■□□□ 1.75
PDLIM2-221ENST00000622702 PIGBQ92521 554 aa25.96■■□□□ 1.75
PDLIM2-221ENST00000622702 WDR63Q8IWG1 891 aa25.95■■□□□ 1.74
PDLIM2-221ENST00000622702 YTHDC1Q96MU7 727 aaKnown RBP25.95■■□□□ 1.74
PDLIM2-221ENST00000622702 THUMPD2Q9BTF0 503 aaKnown RBP25.95■■□□□ 1.74
PDLIM2-221ENST00000622702 VIRMAQ69YN4 1812 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-221ENST00000622702 MRC1P22897 1456 aa25.94■■□□□ 1.74
PDLIM2-221ENST00000622702 CALD1Q05682 793 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-221ENST00000622702 CABP4P57796 275 aa25.92■■□□□ 1.74
PDLIM2-221ENST00000622702 IL16Q14005 1332 aa25.92■■□□□ 1.74
PDLIM2-221ENST00000622702 TEFQ10587 303 aa25.91■■□□□ 1.74
PDLIM2-221ENST00000622702 SLC52A2Q9HAB3 445 aa25.91■■□□□ 1.74
PDLIM2-221ENST00000622702 LY75O60449 1722 aa25.91■■□□□ 1.74
PDLIM2-221ENST00000622702 NBPF14Q5TI25 921 aa25.89■■□□□ 1.73
PDLIM2-221ENST00000622702 NFATC2IPQ8NCF5 419 aa25.89■■□□□ 1.73
PDLIM2-221ENST00000622702 PALLDQ8WX93 1383 aa25.88■■□□□ 1.73
PDLIM2-221ENST00000622702 GOLGA2Q08379 1002 aa25.88■■□□□ 1.73
PDLIM2-221ENST00000622702 SMARCC1Q92922 1105 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-221ENST00000622702 LRRC4BQ9NT99 713 aa25.88■■□□□ 1.73
PDLIM2-221ENST00000622702 ASAP1Q9ULH1 1129 aa25.88■■□□□ 1.73
PDLIM2-221ENST00000622702 SIPA1L3O60292 1781 aaPredicted RBP25.87■■□□□ 1.73
PDLIM2-221ENST00000622702 TAF7Q15545 349 aaPredicted RBP25.87■■□□□ 1.73
PDLIM2-221ENST00000622702 SLC27A3Q5K4L6 730 aa25.87■■□□□ 1.73
PDLIM2-221ENST00000622702 IFT57Q9NWB7 429 aa25.87■■□□□ 1.73
PDLIM2-221ENST00000622702 ZNF853P0CG23 659 aa25.86■■□□□ 1.73
PDLIM2-221ENST00000622702 KCNQ4P56696 695 aa25.86■■□□□ 1.73
PDLIM2-221ENST00000622702 CFAP44Q96MT7 982 aa25.86■■□□□ 1.73
PDLIM2-221ENST00000622702 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
PDLIM2-221ENST00000622702 BABAM1Q9NWV8 329 aa25.86■■□□□ 1.73
PDLIM2-221ENST00000622702 PSDA5PKW4 1024 aaPredicted RBP25.85■■□□□ 1.73
PDLIM2-221ENST00000622702 R3HDM1Q15032 1099 aaKnown RBP25.85■■□□□ 1.73
PDLIM2-221ENST00000622702 CCNL1Q9UK58 526 aaPredicted RBP25.85■■□□□ 1.73
PDLIM2-221ENST00000622702 GNAI1P63096 354 aa25.85■■□□□ 1.73
PDLIM2-221ENST00000622702 CHL1O00533 1208 aa25.84■■□□□ 1.73
PDLIM2-221ENST00000622702 ANO8Q9HCE9 1232 aaPredicted RBP25.84■■□□□ 1.73
PDLIM2-221ENST00000622702 E9PSI1 815 aa25.83■■□□□ 1.73
PDLIM2-221ENST00000622702 SPINK5Q9NQ38 1064 aaPredicted RBP25.83■■□□□ 1.73
PDLIM2-221ENST00000622702 BTBD11A6QL63 1104 aa25.81■■□□□ 1.72
PDLIM2-221ENST00000622702 SLFN5Q08AF3 891 aa25.81■■□□□ 1.72
PDLIM2-221ENST00000622702 CDCA7LQ96GN5 454 aa25.81■■□□□ 1.72
PDLIM2-221ENST00000622702 PAPPAQ13219 1627 aa25.81■■□□□ 1.72
PDLIM2-221ENST00000622702 STK32BQ9NY57 414 aa25.8■■□□□ 1.72
PDLIM2-221ENST00000622702 LAS1LQ9Y4W2 734 aaKnown RBP25.8■■□□□ 1.72
PDLIM2-221ENST00000622702 MYH16Q9H6N6 1097 aa25.79■■□□□ 1.72
PDLIM2-221ENST00000622702 TSPYL4Q9UJ04 414 aa25.79■■□□□ 1.72
PDLIM2-221ENST00000622702 LOC102724428A0A0B4J2F2 783 aa25.79■■□□□ 1.72
PDLIM2-221ENST00000622702 SIK1P57059 783 aa25.79■■□□□ 1.72
PDLIM2-221ENST00000622702 TRMT2AQ8IZ69 625 aaKnown RBP25.79■■□□□ 1.72
PDLIM2-221ENST00000622702 MBIPQ9NS73 344 aa25.79■■□□□ 1.72
PDLIM2-221ENST00000622702 MIS18AQ9NYP9 233 aa25.79■■□□□ 1.72
PDLIM2-221ENST00000622702 KDM3BQ7LBC6 1761 aa25.78■■□□□ 1.72
PDLIM2-221ENST00000622702 SLC15A2Q16348 729 aa25.78■■□□□ 1.72
PDLIM2-221ENST00000622702 ZNF790Q6PG37 636 aa25.77■■□□□ 1.72
PDLIM2-221ENST00000622702 RBM42Q9BTD8 480 aaKnown RBP25.77■■□□□ 1.72
PDLIM2-221ENST00000622702 C5P01031 1676 aa25.77■■□□□ 1.72
PDLIM2-221ENST00000622702 FANCIQ9NVI1 1328 aa25.76■■□□□ 1.71
PDLIM2-221ENST00000622702 TAF1LQ8IZX4 1826 aa25.76■■□□□ 1.71
PDLIM2-221ENST00000622702 PTCD1O75127 700 aaKnown RBP25.75■■□□□ 1.71
PDLIM2-221ENST00000622702 ATP6V1AP38606 617 aa25.75■■□□□ 1.71
PDLIM2-221ENST00000622702 ZNF827Q17R98 1081 aa25.75■■□□□ 1.71
PDLIM2-221ENST00000622702 TSR2Q969E8 191 aaKnown RBP25.75■■□□□ 1.71
PDLIM2-221ENST00000622702 SLC39A6Q13433 755 aa25.74■■□□□ 1.71
PDLIM2-221ENST00000622702 DUSP27Q5VZP5 1158 aa25.74■■□□□ 1.71
PDLIM2-221ENST00000622702 AKT1S1Q96B36 256 aa25.74■■□□□ 1.71
PDLIM2-221ENST00000622702 KCNQ3O43525 872 aa25.72■■□□□ 1.71
PDLIM2-221ENST00000622702 HMGB2P26583 209 aaKnown RBP25.72■■□□□ 1.71
PDLIM2-221ENST00000622702 ITPK1Q13572 414 aa25.72■■□□□ 1.71
PDLIM2-221ENST00000622702 TTC5Q8N0Z6 440 aa25.72■■□□□ 1.71
PDLIM2-221ENST00000622702 SLC4A9Q96Q91 983 aa25.72■■□□□ 1.71
PDLIM2-221ENST00000622702 UBR2Q8IWV8 1755 aa25.71■■□□□ 1.71
PDLIM2-221ENST00000622702 EIF4A1P60842 406 aaKnown RBP25.71■■□□□ 1.71
PDLIM2-221ENST00000622702 ZNF831Q5JPB2 1677 aa25.71■■□□□ 1.71
PDLIM2-221ENST00000622702 KCPQ6ZWJ8 1503 aa25.7■■□□□ 1.7
PDLIM2-221ENST00000622702 LINC00116Q8NCU8 138 aa25.7■■□□□ 1.7
PDLIM2-221ENST00000622702 SRCAPQ6ZRS2 3230 aa25.69■■□□□ 1.7
PDLIM2-221ENST00000622702 C4BP0C0L5 1744 aa25.69■■□□□ 1.7
PDLIM2-221ENST00000622702 ZNF496Q96IT1 587 aaPredicted RBP25.69■■□□□ 1.7
PDLIM2-221ENST00000622702 TFCP2L1Q9NZI6 479 aa25.69■■□□□ 1.7
PDLIM2-221ENST00000622702 HEG1Q9ULI3 1381 aa25.69■■□□□ 1.7
PDLIM2-221ENST00000622702 FMNL2Q96PY5 1086 aa25.68■■□□□ 1.7
PDLIM2-221ENST00000622702 PDGFDQ9GZP0 370 aaPredicted RBP25.68■■□□□ 1.7
PDLIM2-221ENST00000622702 TUBGCP6Q96RT7 1819 aa25.67■■□□□ 1.7
PDLIM2-221ENST00000622702 CASZ1Q86V15 1759 aa25.66■■□□□ 1.7
PDLIM2-221ENST00000622702 EXOSC9Q06265 439 aaKnown RBP25.66■■□□□ 1.7
PDLIM2-221ENST00000622702 AK7Q96M32 723 aa25.66■■□□□ 1.7
PDLIM2-221ENST00000622702 COL5A3P25940 1745 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms