RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 DCAF5Q96JK2 942 aa23.96■■□□□ 1.43
SEMA6C-210ENST00000621728 BTBD11A6QL63 1104 aa23.95■■□□□ 1.42
SEMA6C-210ENST00000621728 USP21Q9UK80 565 aa23.95■■□□□ 1.42
SEMA6C-210ENST00000621728 TNNQ9UQP3 1299 aa23.94■■□□□ 1.42
SEMA6C-210ENST00000621728 TOGARAM1Q9Y4F4 1720 aa23.94■■□□□ 1.42
SEMA6C-210ENST00000621728 NFATC2IPQ8NCF5 419 aa23.94■■□□□ 1.42
SEMA6C-210ENST00000621728 SLC52A2Q9HAB3 445 aa23.94■■□□□ 1.42
SEMA6C-210ENST00000621728 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.93■■□□□ 1.42
SEMA6C-210ENST00000621728 MRC1P22897 1456 aa23.93■■□□□ 1.42
SEMA6C-210ENST00000621728 BABAM1Q9NWV8 329 aa23.93■■□□□ 1.42
SEMA6C-210ENST00000621728 HSP90AB1P08238 724 aaKnown RBP23.92■■□□□ 1.42
SEMA6C-210ENST00000621728 VPS72Q15906 364 aa23.92■■□□□ 1.42
SEMA6C-210ENST00000621728 AFF2P51816 1311 aa23.92■■□□□ 1.42
SEMA6C-210ENST00000621728 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
SEMA6C-210ENST00000621728 TNS2Q63HR2 1409 aa23.91■■□□□ 1.42
SEMA6C-210ENST00000621728 CANXP27824 592 aaKnown RBP23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 SLC39A6Q13433 755 aa23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 NKX1-1Q15270 411 aaPredicted RBP23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 EXOC6Q8TAG9 804 aa23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 EXOC5O00471 708 aa23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 EIF4A1P60842 406 aaKnown RBP23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 FAM98CQ17RN3 349 aaKnown RBP23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 ALDH1L2Q3SY69 923 aa23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 CRBNQ96SW2 442 aa23.9■■□□□ 1.42
SEMA6C-210ENST00000621728 CABP4P57796 275 aa23.88■■□□□ 1.41
SEMA6C-210ENST00000621728 MRPL50Q8N5N7 158 aaKnown RBP23.88■■□□□ 1.41
SEMA6C-210ENST00000621728 BARGINQ6ZT62 677 aa23.88■■□□□ 1.41
SEMA6C-210ENST00000621728 NOB1Q9ULX3 412 aaKnown RBP23.88■■□□□ 1.41
SEMA6C-210ENST00000621728 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
SEMA6C-210ENST00000621728 ZNF428Q96B54 188 aa23.87■■□□□ 1.41
SEMA6C-210ENST00000621728 DDB1Q16531 1140 aa23.86■■□□□ 1.41
SEMA6C-210ENST00000621728 PANK1Q8TE04 598 aa23.86■■□□□ 1.41
SEMA6C-210ENST00000621728 CDCA7Q9BWT1 371 aaPredicted RBP23.86■■□□□ 1.41
SEMA6C-210ENST00000621728 CLUAP1Q96AJ1 413 aa23.85■■□□□ 1.41
SEMA6C-210ENST00000621728 GLI3P10071 1580 aa23.85■■□□□ 1.41
SEMA6C-210ENST00000621728 RLBP1P12271 317 aa23.84■■□□□ 1.41
SEMA6C-210ENST00000621728 PRAMEF22A3QJZ6 481 aa23.84■■□□□ 1.41
SEMA6C-210ENST00000621728 ZNF790Q6PG37 636 aa23.84■■□□□ 1.41
SEMA6C-210ENST00000621728 ITGB4P16144 1822 aa23.84■■□□□ 1.41
SEMA6C-210ENST00000621728 ERVV-2B6SEH9 535 aa23.83■■□□□ 1.41
SEMA6C-210ENST00000621728 ZKSCAN2Q63HK3 967 aa23.83■■□□□ 1.41
SEMA6C-210ENST00000621728 TRIM27P14373 513 aa23.82■■□□□ 1.4
SEMA6C-210ENST00000621728 MARCH10Q8NA82 808 aaPredicted RBP23.82■■□□□ 1.4
SEMA6C-210ENST00000621728 C5P01031 1676 aa23.82■■□□□ 1.4
SEMA6C-210ENST00000621728 DOT1LQ8TEK3 1739 aa23.82■■□□□ 1.4
SEMA6C-210ENST00000621728 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
SEMA6C-210ENST00000621728 KAT6BQ8WYB5 2073 aa23.81■■□□□ 1.4
SEMA6C-210ENST00000621728 ATRNO75882 1429 aa23.81■■□□□ 1.4
SEMA6C-210ENST00000621728 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
SEMA6C-210ENST00000621728 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
SEMA6C-210ENST00000621728 PAPPAQ13219 1627 aa23.8■■□□□ 1.4
SEMA6C-210ENST00000621728 A0A0G2JS52 829 aa23.8■■□□□ 1.4
SEMA6C-210ENST00000621728 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
SEMA6C-210ENST00000621728 THSD7AQ9UPZ6 1657 aa23.79■■□□□ 1.4
SEMA6C-210ENST00000621728 EIF2S2P20042 333 aaKnown RBP23.79■■□□□ 1.4
SEMA6C-210ENST00000621728 PDE3AQ14432 1141 aa23.79■■□□□ 1.4
SEMA6C-210ENST00000621728 ATF7IPQ6VMQ6 1270 aa23.79■■□□□ 1.4
SEMA6C-210ENST00000621728 ZNF496Q96IT1 587 aaPredicted RBP23.79■■□□□ 1.4
SEMA6C-210ENST00000621728 GJD4Q96KN9 370 aaPredicted RBP23.79■■□□□ 1.4
SEMA6C-210ENST00000621728 GIGYF1O75420 1035 aaPredicted RBP23.78■■□□□ 1.4
SEMA6C-210ENST00000621728 SLC4A2P04920 1241 aa23.78■■□□□ 1.4
SEMA6C-210ENST00000621728 HDGFL1Q5TGJ6 251 aa23.78■■□□□ 1.4
SEMA6C-210ENST00000621728 G2E3Q7L622 706 aa23.78■■□□□ 1.4
SEMA6C-210ENST00000621728 TMOD3Q9NYL9 352 aa23.78■■□□□ 1.4
SEMA6C-210ENST00000621728 TTC5Q8N0Z6 440 aa23.77■■□□□ 1.4
SEMA6C-210ENST00000621728 PPP4R2Q9NY27 417 aa23.77■■□□□ 1.4
SEMA6C-210ENST00000621728 UBR2Q8IWV8 1755 aa23.77■■□□□ 1.4
SEMA6C-210ENST00000621728 CCDC30Q5VVM6 783 aa23.76■■□□□ 1.39
SEMA6C-210ENST00000621728 DZIP1LQ8IYY4 767 aaKnown RBP23.76■■□□□ 1.39
SEMA6C-210ENST00000621728 PIGBQ92521 554 aa23.76■■□□□ 1.39
SEMA6C-210ENST00000621728 TRPC5Q9UL62 973 aaPredicted RBP23.76■■□□□ 1.39
SEMA6C-210ENST00000621728 B4GALNT3Q6L9W6 998 aa23.76■■□□□ 1.39
SEMA6C-210ENST00000621728 SOS1Q07889 1333 aaPredicted RBP23.75■■□□□ 1.39
SEMA6C-210ENST00000621728 FTSJ3Q8IY81 847 aaKnown RBP23.75■■□□□ 1.39
SEMA6C-210ENST00000621728 QTRT2Q9H974 415 aaKnown RBP23.75■■□□□ 1.39
SEMA6C-210ENST00000621728 KCPQ6ZWJ8 1503 aa23.75■■□□□ 1.39
SEMA6C-210ENST00000621728 IPO8O15397 1037 aaKnown RBP23.74■■□□□ 1.39
SEMA6C-210ENST00000621728 SYTL4Q96C24 671 aaPredicted RBP23.74■■□□□ 1.39
SEMA6C-210ENST00000621728 ACSBG1Q96GR2 724 aa23.74■■□□□ 1.39
SEMA6C-210ENST00000621728 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
SEMA6C-210ENST00000621728 HOXB7P09629 217 aa23.74■■□□□ 1.39
SEMA6C-210ENST00000621728 FBXO41Q8TF61 875 aa23.74■■□□□ 1.39
SEMA6C-210ENST00000621728 STK31Q9BXU1 1019 aa23.74■■□□□ 1.39
SEMA6C-210ENST00000621728 ANXA1P04083 346 aa23.73■■□□□ 1.39
SEMA6C-210ENST00000621728 PRIM1P49642 420 aaKnown RBP23.73■■□□□ 1.39
SEMA6C-210ENST00000621728 CHPF2Q9P2E5 772 aa23.73■■□□□ 1.39
SEMA6C-210ENST00000621728 ASAP1Q9ULH1 1129 aa23.73■■□□□ 1.39
SEMA6C-210ENST00000621728 FMNL2Q96PY5 1086 aa23.72■■□□□ 1.39
SEMA6C-210ENST00000621728 BCL9O00512 1426 aa23.72■■□□□ 1.39
SEMA6C-210ENST00000621728 RGS12O14924 1447 aa23.72■■□□□ 1.39
SEMA6C-210ENST00000621728 PTCD1O75127 700 aaKnown RBP23.72■■□□□ 1.39
SEMA6C-210ENST00000621728 TMEM57Q8N5G2 664 aa23.72■■□□□ 1.39
SEMA6C-210ENST00000621728 CACNA1FO60840 1977 aa23.71■■□□□ 1.39
SEMA6C-210ENST00000621728 FAM182BQ5T319 152 aa23.71■■□□□ 1.39
SEMA6C-210ENST00000621728 ARHGAP45Q92619 1136 aa23.71■■□□□ 1.39
SEMA6C-210ENST00000621728 PROSER3Q2NL68 480 aa23.7■■□□□ 1.38
SEMA6C-210ENST00000621728 PHAXQ9H814 394 aaKnown RBP23.7■■□□□ 1.38
SEMA6C-210ENST00000621728 ATG3Q9NT62 314 aa23.7■■□□□ 1.38
SEMA6C-210ENST00000621728 USP16Q9Y5T5 823 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms