RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 NEUROD2Q15784 382 aa24.49■■□□□ 1.51
CIRBP-245ENST00000621399 PROM2Q8N271 834 aa24.49■■□□□ 1.51
CIRBP-245ENST00000621399 ATG3Q9NT62 314 aa24.49■■□□□ 1.51
CIRBP-245ENST00000621399 PALLDQ8WX93 1383 aa24.48■■□□□ 1.51
CIRBP-245ENST00000621399 ITGB4P16144 1822 aa24.47■■□□□ 1.51
CIRBP-245ENST00000621399 CEMIPQ8WUJ3 1361 aa24.47■■□□□ 1.51
CIRBP-245ENST00000621399 APAF1O14727 1248 aa24.46■■□□□ 1.51
CIRBP-245ENST00000621399 SCN11AQ9UI33 1791 aa24.46■■□□□ 1.51
CIRBP-245ENST00000621399 LMOD3Q0VAK6 560 aa24.45■■□□□ 1.5
CIRBP-245ENST00000621399 SLC27A3Q5K4L6 730 aa24.45■■□□□ 1.5
CIRBP-245ENST00000621399 ADAMTS7Q9UKP4 1686 aa24.45■■□□□ 1.5
CIRBP-245ENST00000621399 MRC1P22897 1456 aa24.45■■□□□ 1.5
CIRBP-245ENST00000621399 CCNL1Q9UK58 526 aaPredicted RBP24.44■■□□□ 1.5
CIRBP-245ENST00000621399 KCNQ4P56696 695 aa24.43■■□□□ 1.5
CIRBP-245ENST00000621399 THUMPD2Q9BTF0 503 aaKnown RBP24.43■■□□□ 1.5
CIRBP-245ENST00000621399 RGPD3A6NKT7 1758 aaPredicted RBP24.43■■□□□ 1.5
CIRBP-245ENST00000621399 RGPD4Q7Z3J3 1758 aa24.43■■□□□ 1.5
CIRBP-245ENST00000621399 LRRC4BQ9NT99 713 aa24.42■■□□□ 1.5
CIRBP-245ENST00000621399 SLC39A6Q13433 755 aa24.41■■□□□ 1.5
CIRBP-245ENST00000621399 NBPF14Q5TI25 921 aa24.41■■□□□ 1.5
CIRBP-245ENST00000621399 RBM42Q9BTD8 480 aaKnown RBP24.41■■□□□ 1.5
CIRBP-245ENST00000621399 LOC102724428A0A0B4J2F2 783 aa24.4■■□□□ 1.5
CIRBP-245ENST00000621399 BTBD11A6QL63 1104 aa24.4■■□□□ 1.5
CIRBP-245ENST00000621399 PTCD1O75127 700 aaKnown RBP24.4■■□□□ 1.5
CIRBP-245ENST00000621399 SIK1P57059 783 aa24.4■■□□□ 1.5
CIRBP-245ENST00000621399 TAF7Q15545 349 aaPredicted RBP24.39■■□□□ 1.49
CIRBP-245ENST00000621399 TTC5Q8N0Z6 440 aa24.39■■□□□ 1.49
CIRBP-245ENST00000621399 TRIM35Q9UPQ4 493 aa24.39■■□□□ 1.49
CIRBP-245ENST00000621399 SENP3-EIF4A1A0A087X0R7 540 aa24.38■■□□□ 1.49
CIRBP-245ENST00000621399 RREB1Q92766 1687 aa24.37■■□□□ 1.49
CIRBP-245ENST00000621399 ATP6V1AP38606 617 aa24.37■■□□□ 1.49
CIRBP-245ENST00000621399 ZNF790Q6PG37 636 aa24.37■■□□□ 1.49
CIRBP-245ENST00000621399 DLG5Q8TDM6 1919 aa24.36■■□□□ 1.49
CIRBP-245ENST00000621399 LY75O60449 1722 aa24.35■■□□□ 1.49
CIRBP-245ENST00000621399 HMGB2P26583 209 aaKnown RBP24.35■■□□□ 1.49
CIRBP-245ENST00000621399 STK32BQ9NY57 414 aa24.35■■□□□ 1.49
CIRBP-245ENST00000621399 MIS18AQ9NYP9 233 aa24.35■■□□□ 1.49
CIRBP-245ENST00000621399 VIRMAQ69YN4 1812 aaKnown RBP24.34■■□□□ 1.49
CIRBP-245ENST00000621399 SLC4A9Q96Q91 983 aa24.34■■□□□ 1.49
CIRBP-245ENST00000621399 NUP188Q5SRE5 1749 aa24.34■■□□□ 1.49
CIRBP-245ENST00000621399 ITPK1Q13572 414 aa24.33■■□□□ 1.49
CIRBP-245ENST00000621399 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.49
CIRBP-245ENST00000621399 KCNQ3O43525 872 aa24.32■■□□□ 1.48
CIRBP-245ENST00000621399 R3HDM1Q15032 1099 aaKnown RBP24.31■■□□□ 1.48
CIRBP-245ENST00000621399 SLC15A2Q16348 729 aa24.31■■□□□ 1.48
CIRBP-245ENST00000621399 ZNF496Q96IT1 587 aaPredicted RBP24.31■■□□□ 1.48
CIRBP-245ENST00000621399 SALL2Q9Y467 1007 aaPredicted RBP24.31■■□□□ 1.48
CIRBP-245ENST00000621399 SIPA1L3O60292 1781 aaPredicted RBP24.3■■□□□ 1.48
CIRBP-245ENST00000621399 PSDA5PKW4 1024 aaPredicted RBP24.3■■□□□ 1.48
CIRBP-245ENST00000621399 LINC00116Q8NCU8 138 aa24.3■■□□□ 1.48
CIRBP-245ENST00000621399 FMNL2Q96PY5 1086 aa24.3■■□□□ 1.48
CIRBP-245ENST00000621399 PAPPAQ13219 1627 aa24.29■■□□□ 1.48
CIRBP-245ENST00000621399 CALD1Q05682 793 aaKnown RBP24.29■■□□□ 1.48
CIRBP-245ENST00000621399 ZNF827Q17R98 1081 aa24.29■■□□□ 1.48
CIRBP-245ENST00000621399 CCDC27Q2M243 656 aa24.29■■□□□ 1.48
CIRBP-245ENST00000621399 NCBP3Q53F19 620 aaKnown RBP24.29■■□□□ 1.48
CIRBP-245ENST00000621399 AKT1S1Q96B36 256 aa24.29■■□□□ 1.48
CIRBP-245ENST00000621399 TSPYL4Q9UJ04 414 aa24.29■■□□□ 1.48
CIRBP-245ENST00000621399 LAS1LQ9Y4W2 734 aaKnown RBP24.29■■□□□ 1.48
CIRBP-245ENST00000621399 KCPQ6ZWJ8 1503 aa24.29■■□□□ 1.48
CIRBP-245ENST00000621399 VSIG10Q8N0Z9 540 aa24.28■■□□□ 1.48
CIRBP-245ENST00000621399 BABAM1Q9NWV8 329 aa24.28■■□□□ 1.48
CIRBP-245ENST00000621399 WWC1Q8IX03 1113 aa24.27■■□□□ 1.48
CIRBP-245ENST00000621399 DNAJC10Q8IXB1 793 aa24.27■■□□□ 1.48
CIRBP-245ENST00000621399 TFCP2L1Q9NZI6 479 aa24.27■■□□□ 1.48
CIRBP-245ENST00000621399 AK7Q96M32 723 aa24.26■■□□□ 1.47
CIRBP-245ENST00000621399 HEG1Q9ULI3 1381 aa24.26■■□□□ 1.47
CIRBP-245ENST00000621399 NGEFQ8N5V2 710 aa24.25■■□□□ 1.47
CIRBP-245ENST00000621399 CHL1O00533 1208 aa24.24■■□□□ 1.47
CIRBP-245ENST00000621399 CFAP44Q96MT7 982 aa24.24■■□□□ 1.47
CIRBP-245ENST00000621399 TEX13AQ9BXU3 409 aaPredicted RBP24.24■■□□□ 1.47
CIRBP-245ENST00000621399 C5P01031 1676 aa24.23■■□□□ 1.47
CIRBP-245ENST00000621399 ZNF831Q5JPB2 1677 aa24.22■■□□□ 1.47
CIRBP-245ENST00000621399 STARD3NLO95772 234 aa24.22■■□□□ 1.47
CIRBP-245ENST00000621399 SNRPA1P09661 255 aaKnown RBP24.22■■□□□ 1.47
CIRBP-245ENST00000621399 EIF4A1P60842 406 aaKnown RBP24.22■■□□□ 1.47
CIRBP-245ENST00000621399 GNAI1P63096 354 aa24.22■■□□□ 1.47
CIRBP-245ENST00000621399 IFT57Q9NWB7 429 aa24.22■■□□□ 1.47
CIRBP-245ENST00000621399 UBR2Q8IWV8 1755 aa24.21■■□□□ 1.47
CIRBP-245ENST00000621399 CNTNAP4Q9C0A0 1308 aa24.21■■□□□ 1.47
CIRBP-245ENST00000621399 GNPATO15228 680 aa24.21■■□□□ 1.47
CIRBP-245ENST00000621399 CYP19A1P11511 503 aaPredicted RBP24.21■■□□□ 1.47
CIRBP-245ENST00000621399 CRKLP46109 303 aaKnown RBP24.21■■□□□ 1.47
CIRBP-245ENST00000621399 RC3H1Q5TC82 1133 aaKnown RBP24.21■■□□□ 1.47
CIRBP-245ENST00000621399 C4BP0C0L5 1744 aa24.21■■□□□ 1.47
CIRBP-245ENST00000621399 ZNF853P0CG23 659 aa24.2■■□□□ 1.46
CIRBP-245ENST00000621399 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
CIRBP-245ENST00000621399 MBIPQ9NS73 344 aa24.19■■□□□ 1.46
CIRBP-245ENST00000621399 TAF1LQ8IZX4 1826 aa24.19■■□□□ 1.46
CIRBP-245ENST00000621399 PNPLA7Q6ZV29 1317 aa24.18■■□□□ 1.46
CIRBP-245ENST00000621399 PRAMEF22A3QJZ6 481 aa24.18■■□□□ 1.46
CIRBP-245ENST00000621399 INTS5Q6P9B9 1019 aaKnown RBP24.18■■□□□ 1.46
CIRBP-245ENST00000621399 CCDC87Q9NVE4 849 aa24.18■■□□□ 1.46
CIRBP-245ENST00000621399 RTCBQ9Y3I0 505 aaKnown RBP24.18■■□□□ 1.46
CIRBP-245ENST00000621399 IL16Q14005 1332 aa24.17■■□□□ 1.46
CIRBP-245ENST00000621399 MSH5O43196 834 aa24.17■■□□□ 1.46
CIRBP-245ENST00000621399 GIGYF1O75420 1035 aaPredicted RBP24.17■■□□□ 1.46
CIRBP-245ENST00000621399 PHF14O94880 888 aa24.17■■□□□ 1.46
CIRBP-245ENST00000621399 FLAD1Q8NFF5 587 aa24.17■■□□□ 1.46
CIRBP-245ENST00000621399 PDGFDQ9GZP0 370 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 1056.9 ms