RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 KRT28Q7Z3Y7 464 aa24.71■■□□□ 1.55
PCDHA13-203ENST00000617769 OTUD7AQ8TE49 926 aaPredicted RBP24.71■■□□□ 1.55
PCDHA13-203ENST00000617769 MSH6P52701 1360 aa24.71■■□□□ 1.55
PCDHA13-203ENST00000617769 CEP85Q6P2H3 762 aa24.71■■□□□ 1.55
PCDHA13-203ENST00000617769 SLC4A10Q6U841 1118 aa24.71■■□□□ 1.55
PCDHA13-203ENST00000617769 MAP3K5Q99683 1374 aa24.7■■□□□ 1.55
PCDHA13-203ENST00000617769 USP54Q70EL1 1684 aa24.7■■□□□ 1.54
PCDHA13-203ENST00000617769 HSPA2P54652 639 aa24.7■■□□□ 1.54
PCDHA13-203ENST00000617769 RTL1A6NKG5 1358 aa24.69■■□□□ 1.54
PCDHA13-203ENST00000617769 APBB1O00213 710 aa24.69■■□□□ 1.54
PCDHA13-203ENST00000617769 RPAP2Q8IXW5 612 aaPredicted RBP24.69■■□□□ 1.54
PCDHA13-203ENST00000617769 MEIS3Q99687 375 aa24.69■■□□□ 1.54
PCDHA13-203ENST00000617769 HTATSF1O43719 755 aaKnown RBP24.69■■□□□ 1.54
PCDHA13-203ENST00000617769 GBP4Q96PP9 640 aa24.69■■□□□ 1.54
PCDHA13-203ENST00000617769 LGR6Q9HBX8 967 aa24.69■■□□□ 1.54
PCDHA13-203ENST00000617769 C19orf44Q9H6X5 657 aa24.68■■□□□ 1.54
PCDHA13-203ENST00000617769 RRAGDQ9NQL2 400 aaPredicted RBP24.68■■□□□ 1.54
PCDHA13-203ENST00000617769 SMARCA5O60264 1052 aaPredicted RBP24.67■■□□□ 1.54
PCDHA13-203ENST00000617769 PTPRCP08575 1304 aa24.67■■□□□ 1.54
PCDHA13-203ENST00000617769 AXIN2Q9Y2T1 843 aa24.67■■□□□ 1.54
PCDHA13-203ENST00000617769 ARHGEF25Q86VW2 580 aa24.66■■□□□ 1.54
PCDHA13-203ENST00000617769 TAF7Q15545 349 aaPredicted RBP24.66■■□□□ 1.54
PCDHA13-203ENST00000617769 MRE11P49959 708 aa24.65■■□□□ 1.54
PCDHA13-203ENST00000617769 ZC3H6P61129 1189 aaKnown RBP24.65■■□□□ 1.54
PCDHA13-203ENST00000617769 C1orf167Q5SNV9 1468 aa24.65■■□□□ 1.54
PCDHA13-203ENST00000617769 RGPD2P0DJD1 1756 aa24.64■■□□□ 1.53
PCDHA13-203ENST00000617769 TMEM94Q12767 1356 aa24.63■■□□□ 1.53
PCDHA13-203ENST00000617769 SDSP20132 328 aa24.63■■□□□ 1.53
PCDHA13-203ENST00000617769 STK31Q9BXU1 1019 aa24.63■■□□□ 1.53
PCDHA13-203ENST00000617769 USP26Q9BXU7 913 aa24.63■■□□□ 1.53
PCDHA13-203ENST00000617769 SSFA2P28290 1259 aa24.62■■□□□ 1.53
PCDHA13-203ENST00000617769 MPRIPQ6WCQ1 1025 aa24.62■■□□□ 1.53
PCDHA13-203ENST00000617769 ANKRD24Q8TF21 1146 aa24.62■■□□□ 1.53
PCDHA13-203ENST00000617769 GRPEL1Q9HAV7 217 aa24.62■■□□□ 1.53
PCDHA13-203ENST00000617769 ATF3P18847 181 aa24.62■■□□□ 1.53
PCDHA13-203ENST00000617769 RABEP1Q15276 862 aa24.61■■□□□ 1.53
PCDHA13-203ENST00000617769 KCNQ3O43525 872 aa24.6■■□□□ 1.53
PCDHA13-203ENST00000617769 ZNF530Q6P9A1 599 aaPredicted RBP24.6■■□□□ 1.53
PCDHA13-203ENST00000617769 FKBP5Q13451 457 aaPredicted RBP24.6■■□□□ 1.53
PCDHA13-203ENST00000617769 EIF5BO60841 1220 aaKnown RBP24.59■■□□□ 1.53
PCDHA13-203ENST00000617769 FLIIQ13045 1269 aa24.59■■□□□ 1.53
PCDHA13-203ENST00000617769 CCDC30Q5VVM6 783 aa24.59■■□□□ 1.53
PCDHA13-203ENST00000617769 LRRC37A3O60309 1634 aa24.58■■□□□ 1.53
PCDHA13-203ENST00000617769 CABLES1Q8TDN4 633 aa24.58■■□□□ 1.53
PCDHA13-203ENST00000617769 EIF2S2P20042 333 aaKnown RBP24.57■■□□□ 1.52
PCDHA13-203ENST00000617769 SKOR2Q2VWA4 1001 aaPredicted RBP24.57■■□□□ 1.52
PCDHA13-203ENST00000617769 GAS2L3Q86XJ1 694 aa24.57■■□□□ 1.52
PCDHA13-203ENST00000617769 AK9Q5TCS8 1911 aa24.57■■□□□ 1.52
PCDHA13-203ENST00000617769 CASC1Q6TDU7 716 aa24.56■■□□□ 1.52
PCDHA13-203ENST00000617769 PHAXQ9H814 394 aaKnown RBP24.55■■□□□ 1.52
PCDHA13-203ENST00000617769 ISY1Q9ULR0 285 aaKnown RBP24.55■■□□□ 1.52
PCDHA13-203ENST00000617769 HDGFL1Q5TGJ6 251 aa24.55■■□□□ 1.52
PCDHA13-203ENST00000617769 CEMIPQ8WUJ3 1361 aa24.55■■□□□ 1.52
PCDHA13-203ENST00000617769 HMMRO75330 724 aa24.54■■□□□ 1.52
PCDHA13-203ENST00000617769 PLEKHO1Q53GL0 409 aaPredicted RBP24.54■■□□□ 1.52
PCDHA13-203ENST00000617769 PTMSP20962 102 aa24.54■■□□□ 1.52
PCDHA13-203ENST00000617769 SLIT3O75094 1523 aa24.54■■□□□ 1.52
PCDHA13-203ENST00000617769 STRCP1A6NGW2 1772 aa24.53■■□□□ 1.52
PCDHA13-203ENST00000617769 MST1RQ04912 1400 aa24.53■■□□□ 1.52
PCDHA13-203ENST00000617769 TEFQ10587 303 aa24.53■■□□□ 1.52
PCDHA13-203ENST00000617769 TRPM3Q9HCF6 1732 aaPredicted RBP24.53■■□□□ 1.52
PCDHA13-203ENST00000617769 PXDNQ92626 1479 aa24.52■■□□□ 1.52
PCDHA13-203ENST00000617769 BAG4O95429 457 aaKnown RBP24.52■■□□□ 1.52
PCDHA13-203ENST00000617769 CCT4P50991 539 aaKnown RBP24.52■■□□□ 1.52
PCDHA13-203ENST00000617769 AKAP4Q5JQC9 854 aa24.52■■□□□ 1.52
PCDHA13-203ENST00000617769 CLEC17AQ6ZS10 378 aa24.52■■□□□ 1.52
PCDHA13-203ENST00000617769 EIF4A1P60842 406 aaKnown RBP24.52■■□□□ 1.52
PCDHA13-203ENST00000617769 BTBD11A6QL63 1104 aa24.51■■□□□ 1.51
PCDHA13-203ENST00000617769 ANXA1P04083 346 aa24.51■■□□□ 1.51
PCDHA13-203ENST00000617769 GOLGA6L22H0YM25 854 aa24.51■■□□□ 1.51
PCDHA13-203ENST00000617769 PDE1AP54750 535 aa24.5■■□□□ 1.51
PCDHA13-203ENST00000617769 C1orf141Q5JVX7 400 aa24.5■■□□□ 1.51
PCDHA13-203ENST00000617769 EXOC6BQ9Y2D4 811 aa24.5■■□□□ 1.51
PCDHA13-203ENST00000617769 REC8O95072 547 aa24.5■■□□□ 1.51
PCDHA13-203ENST00000617769 CHRNA2Q15822 529 aa24.49■■□□□ 1.51
PCDHA13-203ENST00000617769 BABAM1Q9NWV8 329 aa24.49■■□□□ 1.51
PCDHA13-203ENST00000617769 GNAI2P04899 355 aa24.49■■□□□ 1.51
PCDHA13-203ENST00000617769 PKP1Q13835 747 aa24.49■■□□□ 1.51
PCDHA13-203ENST00000617769 RNMTO43148 476 aaKnown RBP24.48■■□□□ 1.51
PCDHA13-203ENST00000617769 TSHZ3Q63HK5 1081 aa24.48■■□□□ 1.51
PCDHA13-203ENST00000617769 NLRP2Q9NX02 1062 aa24.48■■□□□ 1.51
PCDHA13-203ENST00000617769 ERBB3P21860 1342 aa24.48■■□□□ 1.51
PCDHA13-203ENST00000617769 ERC2O15083 957 aa24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 ST18O60284 1047 aa24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 AMOTQ4VCS5 1084 aa24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 OSBPL3Q9H4L5 887 aa24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 CHPF2Q9P2E5 772 aa24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 DDX49Q9Y6V7 483 aaKnown RBP24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 MED1Q15648 1581 aaPredicted RBP24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 RGPD5Q99666 1765 aa24.47■■□□□ 1.51
PCDHA13-203ENST00000617769 PHRF1Q9P1Y6 1649 aaKnown RBP24.46■■□□□ 1.51
PCDHA13-203ENST00000617769 FAM208AQ9UK61 1670 aaKnown RBP24.46■■□□□ 1.51
PCDHA13-203ENST00000617769 NUCB2P80303 420 aa24.46■■□□□ 1.51
PCDHA13-203ENST00000617769 ZGPATQ8N5A5 531 aaKnown RBP24.46■■□□□ 1.51
PCDHA13-203ENST00000617769 PRAMEF22A3QJZ6 481 aa24.45■■□□□ 1.51
PCDHA13-203ENST00000617769 KLHL40Q2TBA0 621 aa24.45■■□□□ 1.51
PCDHA13-203ENST00000617769 MCTP1Q6DN14 999 aa24.45■■□□□ 1.51
PCDHA13-203ENST00000617769 CYP2E1P05181 493 aaPredicted RBP24.45■■□□□ 1.5
PCDHA13-203ENST00000617769 CADPS2Q86UW7 1296 aa24.44■■□□□ 1.5
PCDHA13-203ENST00000617769 KIF1AQ12756 1690 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms