RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TOM1L2Q6ZVM7 507 aa26.19■■□□□ 1.78
CNTNAP3B-212ENST00000617422 API5Q9BZZ5 524 aaKnown RBP26.19■■□□□ 1.78
CNTNAP3B-212ENST00000617422 BTBD11A6QL63 1104 aa26.18■■□□□ 1.78
CNTNAP3B-212ENST00000617422 BCL11AQ9H165 835 aa26.18■■□□□ 1.78
CNTNAP3B-212ENST00000617422 ZBTB7BO15156 539 aaPredicted RBP26.17■■□□□ 1.78
CNTNAP3B-212ENST00000617422 LARP1Q6PKG0 1096 aaKnown RBP26.17■■□□□ 1.78
CNTNAP3B-212ENST00000617422 SPG7Q9UQ90 795 aa26.17■■□□□ 1.78
CNTNAP3B-212ENST00000617422 COL22A1Q8NFW1 1626 aaPredicted RBP26.17■■□□□ 1.78
CNTNAP3B-212ENST00000617422 STRN4Q9NRL3 753 aa26.17■■□□□ 1.78
CNTNAP3B-212ENST00000617422 NOP58Q9Y2X3 529 aaKnown RBP26.16■■□□□ 1.78
CNTNAP3B-212ENST00000617422 COL16A1Q07092 1604 aaPredicted RBP26.14■■□□□ 1.78
CNTNAP3B-212ENST00000617422 PLEKHG2Q9H7P9 1386 aa26.14■■□□□ 1.77
CNTNAP3B-212ENST00000617422 PTPRCP08575 1304 aa26.13■■□□□ 1.77
CNTNAP3B-212ENST00000617422 IFNL2Q8IZJ0 200 aa26.13■■□□□ 1.77
CNTNAP3B-212ENST00000617422 PARP4Q9UKK3 1724 aaKnown RBP26.13■■□□□ 1.77
CNTNAP3B-212ENST00000617422 CCDC30Q5VVM6 783 aa26.13■■□□□ 1.77
CNTNAP3B-212ENST00000617422 CARD10Q9BWT7 1032 aa26.13■■□□□ 1.77
CNTNAP3B-212ENST00000617422 PHLPP1O60346 1717 aa26.13■■□□□ 1.77
CNTNAP3B-212ENST00000617422 SOS1Q07889 1333 aaPredicted RBP26.12■■□□□ 1.77
CNTNAP3B-212ENST00000617422 INTS3Q68E01 1043 aaKnown RBP26.12■■□□□ 1.77
CNTNAP3B-212ENST00000617422 ANP32AP39687 249 aaKnown RBP26.11■■□□□ 1.77
CNTNAP3B-212ENST00000617422 BTG4Q9NY30 223 aa26.11■■□□□ 1.77
CNTNAP3B-212ENST00000617422 STK31Q9BXU1 1019 aa26.1■■□□□ 1.77
CNTNAP3B-212ENST00000617422 C1orf115Q9H7X2 142 aa26.1■■□□□ 1.77
CNTNAP3B-212ENST00000617422 CACNA1FO60840 1977 aa26.1■■□□□ 1.77
CNTNAP3B-212ENST00000617422 F6X3S4 739 aa26.1■■□□□ 1.77
CNTNAP3B-212ENST00000617422 EVA1CP58658 441 aa26.1■■□□□ 1.77
CNTNAP3B-212ENST00000617422 HDGFL1Q5TGJ6 251 aa26.1■■□□□ 1.77
CNTNAP3B-212ENST00000617422 HEG1Q9ULI3 1381 aa26.1■■□□□ 1.77
CNTNAP3B-212ENST00000617422 SHANK3Q9BYB0 1731 aa26.09■■□□□ 1.77
CNTNAP3B-212ENST00000617422 PIP4K2BP78356 416 aa26.09■■□□□ 1.77
CNTNAP3B-212ENST00000617422 RWDD1Q9H446 243 aaPredicted RBP26.09■■□□□ 1.77
CNTNAP3B-212ENST00000617422 SLC52A2Q9HAB3 445 aa26.09■■□□□ 1.77
CNTNAP3B-212ENST00000617422 NFATC2IPQ8NCF5 419 aa26.09■■□□□ 1.77
CNTNAP3B-212ENST00000617422 COL14A1Q05707 1796 aaKnown RBP26.08■■□□□ 1.77
CNTNAP3B-212ENST00000617422 PRAMEF22A3QJZ6 481 aa26.08■■□□□ 1.77
CNTNAP3B-212ENST00000617422 EIF2S2P20042 333 aaKnown RBP26.07■■□□□ 1.76
CNTNAP3B-212ENST00000617422 FLIIQ13045 1269 aa26.07■■□□□ 1.76
CNTNAP3B-212ENST00000617422 SLC39A6Q13433 755 aa26.07■■□□□ 1.76
CNTNAP3B-212ENST00000617422 HDAC1Q13547 482 aaPredicted RBP26.07■■□□□ 1.76
CNTNAP3B-212ENST00000617422 MRC1P22897 1456 aa26.07■■□□□ 1.76
CNTNAP3B-212ENST00000617422 RGS3P49796 1198 aa26.07■■□□□ 1.76
CNTNAP3B-212ENST00000617422 DCAF5Q96JK2 942 aa26.07■■□□□ 1.76
CNTNAP3B-212ENST00000617422 HOXB7P09629 217 aa26.06■■□□□ 1.76
CNTNAP3B-212ENST00000617422 IL2RBP14784 551 aa26.06■■□□□ 1.76
CNTNAP3B-212ENST00000617422 ZCRB1Q8TBF4 217 aaKnown RBP26.06■■□□□ 1.76
CNTNAP3B-212ENST00000617422 USP35Q9P2H5 1018 aa26.06■■□□□ 1.76
CNTNAP3B-212ENST00000617422 GIGYF1O75420 1035 aaPredicted RBP26.05■■□□□ 1.76
CNTNAP3B-212ENST00000617422 PHAXQ9H814 394 aaKnown RBP26.05■■□□□ 1.76
CNTNAP3B-212ENST00000617422 IPO9Q96P70 1041 aaKnown RBP26.05■■□□□ 1.76
CNTNAP3B-212ENST00000617422 TOM1O60784 492 aa26.03■■□□□ 1.76
CNTNAP3B-212ENST00000617422 SIRT2Q8IXJ6 389 aa26.03■■□□□ 1.76
CNTNAP3B-212ENST00000617422 CHPF2Q9P2E5 772 aa26.03■■□□□ 1.76
CNTNAP3B-212ENST00000617422 ZNF790Q6PG37 636 aa26.03■■□□□ 1.76
CNTNAP3B-212ENST00000617422 PDZRN3Q9UPQ7 1066 aa26.03■■□□□ 1.76
CNTNAP3B-212ENST00000617422 ANXA1P04083 346 aa26.02■■□□□ 1.76
CNTNAP3B-212ENST00000617422 FKBP5Q13451 457 aaPredicted RBP26.02■■□□□ 1.76
CNTNAP3B-212ENST00000617422 PCDH11XQ9BZA7 1347 aa26.02■■□□□ 1.76
CNTNAP3B-212ENST00000617422 PCDH11YQ9BZA8 1340 aa26.02■■□□□ 1.76
CNTNAP3B-212ENST00000617422 SLC4A10Q6U841 1118 aa26.02■■□□□ 1.76
CNTNAP3B-212ENST00000617422 C5P01031 1676 aa26.01■■□□□ 1.75
CNTNAP3B-212ENST00000617422 MEIS3Q99687 375 aa26■■□□□ 1.75
CNTNAP3B-212ENST00000617422 HSP90AB1P08238 724 aaKnown RBP25.99■■□□□ 1.75
CNTNAP3B-212ENST00000617422 PDE4AP27815 886 aa25.99■■□□□ 1.75
CNTNAP3B-212ENST00000617422 ADAMTS2O95450 1211 aa25.99■■□□□ 1.75
CNTNAP3B-212ENST00000617422 SMC5Q8IY18 1101 aa25.99■■□□□ 1.75
CNTNAP3B-212ENST00000617422 CHMP4BQ9H444 224 aaKnown RBP25.99■■□□□ 1.75
CNTNAP3B-212ENST00000617422 PLCH1Q4KWH8 1693 aa25.98■■□□□ 1.75
CNTNAP3B-212ENST00000617422 PROSER3Q2NL68 480 aa25.98■■□□□ 1.75
CNTNAP3B-212ENST00000617422 DDX54Q8TDD1 881 aaKnown RBP25.97■■□□□ 1.75
CNTNAP3B-212ENST00000617422 UBAP1LF5GYI3 381 aa25.97■■□□□ 1.75
CNTNAP3B-212ENST00000617422 ZNF496Q96IT1 587 aaPredicted RBP25.97■■□□□ 1.75
CNTNAP3B-212ENST00000617422 ATP10DQ9P241 1426 aa25.97■■□□□ 1.75
CNTNAP3B-212ENST00000617422 N4BP2Q86UW6 1770 aaPredicted RBP25.96■■□□□ 1.75
CNTNAP3B-212ENST00000617422 NKX1-1Q15270 411 aaPredicted RBP25.96■■□□□ 1.75
CNTNAP3B-212ENST00000617422 BACH2Q9BYV9 841 aa25.96■■□□□ 1.75
CNTNAP3B-212ENST00000617422 GLI3P10071 1580 aa25.96■■□□□ 1.75
CNTNAP3B-212ENST00000617422 CABP4P57796 275 aa25.96■■□□□ 1.75
CNTNAP3B-212ENST00000617422 DISP2A7MBM2 1401 aa25.95■■□□□ 1.75
CNTNAP3B-212ENST00000617422 CCT4P50991 539 aaKnown RBP25.95■■□□□ 1.74
CNTNAP3B-212ENST00000617422 TOGARAM1Q9Y4F4 1720 aa25.95■■□□□ 1.74
CNTNAP3B-212ENST00000617422 ZBTB47Q9UFB7 747 aaPredicted RBP25.94■■□□□ 1.74
CNTNAP3B-212ENST00000617422 NUTM2BA6NNL0 878 aaPredicted RBP25.93■■□□□ 1.74
CNTNAP3B-212ENST00000617422 NUTM2EB1AL46 878 aaPredicted RBP25.93■■□□□ 1.74
CNTNAP3B-212ENST00000617422 NUTM2AQ8IVF1 878 aaPredicted RBP25.93■■□□□ 1.74
CNTNAP3B-212ENST00000617422 NRAPQ86VF7 1730 aa25.93■■□□□ 1.74
CNTNAP3B-212ENST00000617422 DBF4Q9UBU7 674 aaPredicted RBP25.92■■□□□ 1.74
CNTNAP3B-212ENST00000617422 PDIA6Q15084 440 aa25.92■■□□□ 1.74
CNTNAP3B-212ENST00000617422 PXDNLA1KZ92 1463 aa25.91■■□□□ 1.74
CNTNAP3B-212ENST00000617422 ADCY9O60503 1353 aa25.9■■□□□ 1.74
CNTNAP3B-212ENST00000617422 ERVV-2B6SEH9 535 aa25.89■■□□□ 1.74
CNTNAP3B-212ENST00000617422 C8orf34Q49A92 452 aa25.89■■□□□ 1.74
CNTNAP3B-212ENST00000617422 CEP85Q6P2H3 762 aa25.89■■□□□ 1.74
CNTNAP3B-212ENST00000617422 WNK3Q9BYP7 1800 aa25.89■■□□□ 1.73
CNTNAP3B-212ENST00000617422 PI4KAP2A4QPH2 592 aa25.89■■□□□ 1.73
CNTNAP3B-212ENST00000617422 PI4KAP1Q8N8J0 262 aa25.89■■□□□ 1.73
CNTNAP3B-212ENST00000617422 TTC5Q8N0Z6 440 aa25.88■■□□□ 1.73
CNTNAP3B-212ENST00000617422 ANKRD44Q8N8A2 993 aa25.88■■□□□ 1.73
CNTNAP3B-212ENST00000617422 CHMP4AQ9BY43 222 aa25.88■■□□□ 1.73
CNTNAP3B-212ENST00000617422 USP16Q9Y5T5 823 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms