RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 ADGRL2O95490 1459 aa18.55■□□□□ 0.56
SYNRG-223ENST00000616179 NCBP1Q09161 790 aaKnown RBP18.55■□□□□ 0.56
SYNRG-223ENST00000616179 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
SYNRG-223ENST00000616179 SKILP12757 684 aa18.55■□□□□ 0.56
SYNRG-223ENST00000616179 TYRO3Q06418 890 aa18.55■□□□□ 0.56
SYNRG-223ENST00000616179 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
SYNRG-223ENST00000616179 GNAI2P04899 355 aa18.54■□□□□ 0.56
SYNRG-223ENST00000616179 ZNF397Q8NF99 534 aaPredicted RBP18.54■□□□□ 0.56
SYNRG-223ENST00000616179 ZNF215Q9UL58 517 aaPredicted RBP18.54■□□□□ 0.56
SYNRG-223ENST00000616179 CCDC9Q9Y3X0 531 aaKnown RBP18.54■□□□□ 0.56
SYNRG-223ENST00000616179 F13A1P00488 732 aa18.54■□□□□ 0.56
SYNRG-223ENST00000616179 MCM10Q7L590 875 aa18.54■□□□□ 0.56
SYNRG-223ENST00000616179 UBXN4Q92575 508 aa18.54■□□□□ 0.56
SYNRG-223ENST00000616179 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
SYNRG-223ENST00000616179 SF3A1Q15459 793 aaKnown RBP18.54■□□□□ 0.56
SYNRG-223ENST00000616179 PDRG1Q9NUG6 133 aa18.54■□□□□ 0.56
SYNRG-223ENST00000616179 LIMCH1Q9UPQ0 1083 aa18.54■□□□□ 0.56
SYNRG-223ENST00000616179 NUP160Q12769 1436 aa18.53■□□□□ 0.56
SYNRG-223ENST00000616179 CEP85Q6P2H3 762 aa18.53■□□□□ 0.56
SYNRG-223ENST00000616179 C10orf67Q8IYJ2 551 aa18.53■□□□□ 0.56
SYNRG-223ENST00000616179 IPO4Q8TEX9 1081 aaKnown RBP18.53■□□□□ 0.56
SYNRG-223ENST00000616179 TMCO3Q6UWJ1 677 aa18.53■□□□□ 0.56
SYNRG-223ENST00000616179 SDF4Q9BRK5 362 aa18.53■□□□□ 0.56
SYNRG-223ENST00000616179 TMEM51Q9NW97 253 aa18.53■□□□□ 0.56
SYNRG-223ENST00000616179 RRS1Q15050 365 aaKnown RBP18.52■□□□□ 0.56
SYNRG-223ENST00000616179 PPFIA3O75145 1194 aa18.52■□□□□ 0.56
SYNRG-223ENST00000616179 IRX5P78411 483 aaPredicted RBP18.52■□□□□ 0.56
SYNRG-223ENST00000616179 IL16Q14005 1332 aa18.52■□□□□ 0.56
SYNRG-223ENST00000616179 IRX3P78415 501 aaPredicted RBP18.52■□□□□ 0.55
SYNRG-223ENST00000616179 PRPF40BQ6NWY9 871 aaKnown RBP18.52■□□□□ 0.55
SYNRG-223ENST00000616179 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.55
SYNRG-223ENST00000616179 TSPYL4Q9UJ04 414 aa18.51■□□□□ 0.55
SYNRG-223ENST00000616179 EMILIN1Q9Y6C2 1016 aa18.51■□□□□ 0.55
SYNRG-223ENST00000616179 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
SYNRG-223ENST00000616179 ARHGAP45Q92619 1136 aa18.51■□□□□ 0.55
SYNRG-223ENST00000616179 ST7Q9NRC1 585 aa18.51■□□□□ 0.55
SYNRG-223ENST00000616179 CYP46A1Q9Y6A2 500 aa18.51■□□□□ 0.55
SYNRG-223ENST00000616179 AK2P54819 239 aa18.51■□□□□ 0.55
SYNRG-223ENST00000616179 GOLGA6L1Q8N7Z2 621 aa18.51■□□□□ 0.55
SYNRG-223ENST00000616179 CCDC73Q6ZRK6 1079 aa18.5■□□□□ 0.55
SYNRG-223ENST00000616179 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
SYNRG-223ENST00000616179 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
SYNRG-223ENST00000616179 URI1O94763 535 aaPredicted RBP18.5■□□□□ 0.55
SYNRG-223ENST00000616179 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
SYNRG-223ENST00000616179 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
SYNRG-223ENST00000616179 PLA2R1Q13018 1463 aa18.49■□□□□ 0.55
SYNRG-223ENST00000616179 TPM4P67936 248 aa18.49■□□□□ 0.55
SYNRG-223ENST00000616179 APPP05067 770 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 FYB1O15117 783 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 TERF2Q15554 542 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 CNTROBQ8N137 903 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 NEK11Q8NG66 645 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 PRAM1Q96QH2 718 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 USP16Q9Y5T5 823 aa18.48■□□□□ 0.55
SYNRG-223ENST00000616179 SLU7O95391 586 aaKnown RBP18.48■□□□□ 0.55
SYNRG-223ENST00000616179 CHMLP26374 656 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
SYNRG-223ENST00000616179 CBX8Q9HC52 389 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 CWC15Q9P013 229 aaKnown RBP18.47■□□□□ 0.55
SYNRG-223ENST00000616179 CTNNA3Q9UI47 895 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 KINO60870 393 aaKnown RBP18.47■□□□□ 0.55
SYNRG-223ENST00000616179 UBTFL1P0CB47 393 aaPredicted RBP18.47■□□□□ 0.55
SYNRG-223ENST00000616179 ZSCAN25Q6NSZ9 544 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 LMAN1P49257 510 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 SNW1Q13573 536 aaKnown RBP18.47■□□□□ 0.55
SYNRG-223ENST00000616179 ARHGAP29Q52LW3 1261 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 GPATCH11Q8N954 259 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 CCDC34Q96HJ3 373 aa18.47■□□□□ 0.55
SYNRG-223ENST00000616179 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
SYNRG-223ENST00000616179 C14orf37Q86TY3 774 aa18.46■□□□□ 0.55
SYNRG-223ENST00000616179 ERCC6LQ2NKX8 1250 aa18.46■□□□□ 0.55
SYNRG-223ENST00000616179 COG3Q96JB2 828 aa18.46■□□□□ 0.55
SYNRG-223ENST00000616179 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
SYNRG-223ENST00000616179 SYT10Q6XYQ8 523 aa18.45■□□□□ 0.54
SYNRG-223ENST00000616179 PDILTQ8N807 584 aa18.45■□□□□ 0.54
SYNRG-223ENST00000616179 SPTLC3Q9NUV7 552 aa18.45■□□□□ 0.54
SYNRG-223ENST00000616179 CCDC69A6NI79 296 aa18.45■□□□□ 0.54
SYNRG-223ENST00000616179 PRDM15P57071 1507 aaPredicted RBP18.45■□□□□ 0.54
SYNRG-223ENST00000616179 LIG1P18858 919 aa18.45■□□□□ 0.54
SYNRG-223ENST00000616179 ZSWIM4Q9H7M6 989 aa18.45■□□□□ 0.54
SYNRG-223ENST00000616179 DDX41Q9UJV9 622 aaKnown RBP18.45■□□□□ 0.54
SYNRG-223ENST00000616179 PDCP20941 246 aa18.44■□□□□ 0.54
SYNRG-223ENST00000616179 KRBA2Q6ZNG9 492 aa18.44■□□□□ 0.54
SYNRG-223ENST00000616179 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
SYNRG-223ENST00000616179 LEKR1Q6ZMV7 388 aa18.44■□□□□ 0.54
SYNRG-223ENST00000616179 CEP170Q5SW79 1584 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
SYNRG-223ENST00000616179 ZNF75DP51815 510 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 CCDC191Q8NCU4 936 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 CACTINQ8WUQ7 758 aaKnown RBP18.43■□□□□ 0.54
SYNRG-223ENST00000616179 RSPH14Q9UHP6 348 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 GNAI3P08754 354 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 ME1P48163 572 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 ARID5BQ14865 1188 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 TTLL5Q6EMB2 1281 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 AK7Q96M32 723 aa18.43■□□□□ 0.54
SYNRG-223ENST00000616179 PLEKHF1Q96S99 279 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms