RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GNAI3P08754 354 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 MAP7D1Q3KQU3 841 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 CEP131Q9UPN4 1083 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 HLA-DOAP06340 250 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 ATP6V1E1P36543 226 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 STX6O43752 255 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 CBFA2T2O43439 604 aa14.67□□□□□ -0.06
TCF4-248ENST00000616053 LETM1O95202 739 aaPredicted RBP14.66□□□□□ -0.06
TCF4-248ENST00000616053 LUZP1Q86V48 1076 aa14.66□□□□□ -0.06
TCF4-248ENST00000616053 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
TCF4-248ENST00000616053 NACA2Q9H009 215 aa14.66□□□□□ -0.06
TCF4-248ENST00000616053 RSPH3Q86UC2 560 aa14.66□□□□□ -0.06
TCF4-248ENST00000616053 GPHNQ9NQX3 736 aaPredicted RBP14.66□□□□□ -0.06
TCF4-248ENST00000616053 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.66□□□□□ -0.06
TCF4-248ENST00000616053 V9GYY5 206 aaPredicted RBP14.66□□□□□ -0.06
TCF4-248ENST00000616053 FGFR1OPO95684 399 aaKnown RBP14.66□□□□□ -0.06
TCF4-248ENST00000616053 IMMTQ16891 758 aaKnown RBP14.66□□□□□ -0.06
TCF4-248ENST00000616053 METTL24Q5JXM2 366 aa14.66□□□□□ -0.06
TCF4-248ENST00000616053 EEA1Q15075 1411 aa14.66□□□□□ -0.06
TCF4-248ENST00000616053 PDE4AP27815 886 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 C6orf163Q5TEZ5 329 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 ST5P78524 1137 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 PROCA1Q8NCQ7 364 aaPredicted RBP14.65□□□□□ -0.06
TCF4-248ENST00000616053 PANK3Q9H999 370 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 CTNNA3Q9UI47 895 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 DNA2P51530 1060 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 TMOD3Q9NYL9 352 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 TCERG1LQ5VWI1 586 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 CCDC148Q8NFR7 591 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 GSDMBQ8TAX9 411 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 TTC36A6NLP5 189 aa14.65□□□□□ -0.06
TCF4-248ENST00000616053 IFIT1P09914 478 aaKnown RBP14.64□□□□□ -0.07
TCF4-248ENST00000616053 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 RFC4P35249 363 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 RBM26Q5T8P6 1007 aaKnown RBP14.64□□□□□ -0.07
TCF4-248ENST00000616053 MPHOSPH9Q99550 1183 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 FAM200AQ8TCP9 573 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 GMNNO75496 209 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 TCHPQ9BT92 498 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 MKRN1Q9UHC7 482 aaKnown RBP14.64□□□□□ -0.07
TCF4-248ENST00000616053 ANAPC4Q9UJX5 808 aa14.64□□□□□ -0.07
TCF4-248ENST00000616053 ZNF530Q6P9A1 599 aaPredicted RBP14.63□□□□□ -0.07
TCF4-248ENST00000616053 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.63□□□□□ -0.07
TCF4-248ENST00000616053 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
TCF4-248ENST00000616053 GAS8O95995 478 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 LNPKQ9C0E8 428 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 OPA1O60313 960 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 BRDTQ58F21 947 aaPredicted RBP14.63□□□□□ -0.07
TCF4-248ENST00000616053 CCT6BQ92526 530 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 ANKRD1Q15327 319 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 JDP2Q8WYK2 163 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 FAM212AQ96EL1 285 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 GABPAQ06546 454 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 KIF5AQ12840 1032 aa14.63□□□□□ -0.07
TCF4-248ENST00000616053 CCDC102AQ96A19 550 aa14.62□□□□□ -0.07
TCF4-248ENST00000616053 PRPF4BQ13523 1007 aaKnown RBP14.62□□□□□ -0.07
TCF4-248ENST00000616053 ANKLE2Q86XL3 938 aa14.62□□□□□ -0.07
TCF4-248ENST00000616053 IQCGQ9H095 443 aaKnown RBP14.62□□□□□ -0.07
TCF4-248ENST00000616053 DHX57Q6P158 1386 aaKnown RBP14.62□□□□□ -0.07
TCF4-248ENST00000616053 ATP2C2O75185 946 aa14.62□□□□□ -0.07
TCF4-248ENST00000616053 SPECC1Q5M775 1068 aa14.62□□□□□ -0.07
TCF4-248ENST00000616053 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
TCF4-248ENST00000616053 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
TCF4-248ENST00000616053 VIMP08670 466 aaKnown RBP14.61□□□□□ -0.07
TCF4-248ENST00000616053 RNF214Q8ND24 703 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 CCDC66A2RUB6 948 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
TCF4-248ENST00000616053 CRCPO75575 148 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 HDGFL1Q5TGJ6 251 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 CEP83Q9Y592 693 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 KAT6BQ8WYB5 2073 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 ARID5AQ03989 594 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 ATXN8OSP0DMR3 200 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 NOP9Q86U38 636 aaKnown RBP14.61□□□□□ -0.07
TCF4-248ENST00000616053 GOLGA6L9A6NEM1 432 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 ARHGAP29Q52LW3 1261 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 SPC24Q8NBT2 197 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 FIBPO43427 364 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 DAAM2Q86T65 1068 aa14.61□□□□□ -0.07
TCF4-248ENST00000616053 MMRN2Q9H8L6 949 aa14.6□□□□□ -0.07
TCF4-248ENST00000616053 CCDC144AA2RUR9 1427 aa14.6□□□□□ -0.07
TCF4-248ENST00000616053 TDRD12Q587J7 1177 aaKnown RBP14.6□□□□□ -0.07
TCF4-248ENST00000616053 CYP46A1Q9Y6A2 500 aa14.6□□□□□ -0.07
TCF4-248ENST00000616053 CCDC63Q8NA47 563 aa14.6□□□□□ -0.07
TCF4-248ENST00000616053 IMPG2Q9BZV3 1241 aa14.6□□□□□ -0.07
TCF4-248ENST00000616053 MXRA7P84157 204 aa14.6□□□□□ -0.07
TCF4-248ENST00000616053 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
TCF4-248ENST00000616053 NASPP49321 788 aaPredicted RBP14.6□□□□□ -0.07
TCF4-248ENST00000616053 USP37Q86T82 979 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
TCF4-248ENST00000616053 ZBTB16Q05516 673 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 KIAA1524Q8TCG1 905 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 PRKAG2Q9UGJ0 569 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 GEN1Q17RS7 908 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 VEZTQ9HBM0 779 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 PTCD1O75127 700 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms