RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 FTSJ3Q8IY81 847 aaKnown RBP12.53□□□□□ -0.4
GGA3-221ENST00000614198 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
GGA3-221ENST00000614198 NHSL1Q5SYE7 1610 aa12.53□□□□□ -0.4
GGA3-221ENST00000614198 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
GGA3-221ENST00000614198 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
GGA3-221ENST00000614198 HSP90AA2PQ14568 343 aaPredicted RBP12.53□□□□□ -0.4
GGA3-221ENST00000614198 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
GGA3-221ENST00000614198 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
GGA3-221ENST00000614198 ZKSCAN2Q63HK3 967 aa12.53□□□□□ -0.4
GGA3-221ENST00000614198 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.4
GGA3-221ENST00000614198 F6X3S4 739 aa12.52□□□□□ -0.4
GGA3-221ENST00000614198 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.4
GGA3-221ENST00000614198 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.4
GGA3-221ENST00000614198 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
GGA3-221ENST00000614198 C1orf141Q5JVX7 400 aa12.52□□□□□ -0.41
GGA3-221ENST00000614198 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
GGA3-221ENST00000614198 DZIP1LQ8IYY4 767 aaKnown RBP12.52□□□□□ -0.41
GGA3-221ENST00000614198 NAP1L5Q96NT1 182 aaPredicted RBP12.52□□□□□ -0.41
GGA3-221ENST00000614198 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
GGA3-221ENST00000614198 RNMTO43148 476 aaKnown RBP12.51□□□□□ -0.41
GGA3-221ENST00000614198 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
GGA3-221ENST00000614198 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
GGA3-221ENST00000614198 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
GGA3-221ENST00000614198 FAM208AQ9UK61 1670 aaKnown RBP12.5□□□□□ -0.41
GGA3-221ENST00000614198 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
GGA3-221ENST00000614198 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
GGA3-221ENST00000614198 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
GGA3-221ENST00000614198 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
GGA3-221ENST00000614198 TEFQ10587 303 aa12.5□□□□□ -0.41
GGA3-221ENST00000614198 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
GGA3-221ENST00000614198 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
GGA3-221ENST00000614198 SLKQ9H2G2 1235 aaPredicted RBP12.5□□□□□ -0.41
GGA3-221ENST00000614198 CPDO75976 1380 aa12.5□□□□□ -0.41
GGA3-221ENST00000614198 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
GGA3-221ENST00000614198 PHAXQ9H814 394 aaKnown RBP12.49□□□□□ -0.41
GGA3-221ENST00000614198 KDM2BQ8NHM5 1336 aa12.49□□□□□ -0.41
GGA3-221ENST00000614198 PHKG2P15735 406 aa12.49□□□□□ -0.41
GGA3-221ENST00000614198 C8orf34Q49A92 452 aa12.49□□□□□ -0.41
GGA3-221ENST00000614198 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
GGA3-221ENST00000614198 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
GGA3-221ENST00000614198 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
GGA3-221ENST00000614198 TOM1O60784 492 aa12.48□□□□□ -0.41
GGA3-221ENST00000614198 SLC4A10Q6U841 1118 aa12.48□□□□□ -0.41
GGA3-221ENST00000614198 KDM6AO15550 1401 aaPredicted RBP12.48□□□□□ -0.41
GGA3-221ENST00000614198 CLCN1P35523 988 aa12.47□□□□□ -0.41
GGA3-221ENST00000614198 PHLPP1O60346 1717 aa12.47□□□□□ -0.41
GGA3-221ENST00000614198 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
GGA3-221ENST00000614198 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
GGA3-221ENST00000614198 AMOTQ4VCS5 1084 aa12.47□□□□□ -0.41
GGA3-221ENST00000614198 LMO7Q8WWI1 1683 aa12.47□□□□□ -0.41
GGA3-221ENST00000614198 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
GGA3-221ENST00000614198 CENPQQ7L2Z9 268 aaPredicted RBP12.46□□□□□ -0.41
GGA3-221ENST00000614198 RBM10P98175 930 aaKnown RBP12.46□□□□□ -0.41
GGA3-221ENST00000614198 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
GGA3-221ENST00000614198 SRCAPQ6ZRS2 3230 aa12.46□□□□□ -0.42
GGA3-221ENST00000614198 A0A0G2JS52 829 aa12.46□□□□□ -0.42
GGA3-221ENST00000614198 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
GGA3-221ENST00000614198 LRRC37A3O60309 1634 aa12.45□□□□□ -0.42
GGA3-221ENST00000614198 C8orf37Q96NL8 207 aa12.45□□□□□ -0.42
GGA3-221ENST00000614198 CCDC9Q9Y3X0 531 aaKnown RBP12.45□□□□□ -0.42
GGA3-221ENST00000614198 HTATSF1O43719 755 aaKnown RBP12.44□□□□□ -0.42
GGA3-221ENST00000614198 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
GGA3-221ENST00000614198 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
GGA3-221ENST00000614198 ZCRB1Q8TBF4 217 aaKnown RBP12.44□□□□□ -0.42
GGA3-221ENST00000614198 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
GGA3-221ENST00000614198 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
GGA3-221ENST00000614198 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
GGA3-221ENST00000614198 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
GGA3-221ENST00000614198 IL2RBP14784 551 aa12.44□□□□□ -0.42
GGA3-221ENST00000614198 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
GGA3-221ENST00000614198 UTRNP46939 3433 aa12.43□□□□□ -0.42
GGA3-221ENST00000614198 KIF16BQ96L93 1317 aa12.43□□□□□ -0.42
GGA3-221ENST00000614198 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
GGA3-221ENST00000614198 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
GGA3-221ENST00000614198 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
GGA3-221ENST00000614198 SLC52A2Q9HAB3 445 aa12.43□□□□□ -0.42
GGA3-221ENST00000614198 CARD10Q9BWT7 1032 aa12.43□□□□□ -0.42
GGA3-221ENST00000614198 RGS12O14924 1447 aa12.42□□□□□ -0.42
GGA3-221ENST00000614198 FKBP5Q13451 457 aaPredicted RBP12.42□□□□□ -0.42
GGA3-221ENST00000614198 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
GGA3-221ENST00000614198 MYL6BP14649 208 aa12.42□□□□□ -0.42
GGA3-221ENST00000614198 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
GGA3-221ENST00000614198 USP16Q9Y5T5 823 aa12.42□□□□□ -0.42
GGA3-221ENST00000614198 HSPA1LP34931 641 aa12.42□□□□□ -0.42
GGA3-221ENST00000614198 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
GGA3-221ENST00000614198 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
GGA3-221ENST00000614198 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
GGA3-221ENST00000614198 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
GGA3-221ENST00000614198 CERKQ8TCT0 537 aa12.41□□□□□ -0.42
GGA3-221ENST00000614198 ZBTB40Q9NUA8 1239 aa12.41□□□□□ -0.42
GGA3-221ENST00000614198 FLIIQ13045 1269 aa12.41□□□□□ -0.42
GGA3-221ENST00000614198 MEIS3Q99687 375 aa12.41□□□□□ -0.42
GGA3-221ENST00000614198 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
GGA3-221ENST00000614198 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
GGA3-221ENST00000614198 XRCC6P12956 609 aaKnown RBP eCLIP12.4□□□□□ -0.42
GGA3-221ENST00000614198 CABP4P57796 275 aa12.4□□□□□ -0.42
GGA3-221ENST00000614198 FSD2A1L4K1 749 aa12.4□□□□□ -0.42
GGA3-221ENST00000614198 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
GGA3-221ENST00000614198 ABCC4O15439 1325 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 PDE4CQ08493 712 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms