RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
TNXB-209ENST00000613214 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
TNXB-209ENST00000613214 CCDC7Q96M83 1385 aa18.07■□□□□ 0.48
TNXB-209ENST00000613214 ZNF444Q8N0Y2 327 aaPredicted RBP18.07■□□□□ 0.48
TNXB-209ENST00000613214 PANK2Q9BZ23 570 aa18.06■□□□□ 0.48
TNXB-209ENST00000613214 WAPLQ7Z5K2 1190 aa18.06■□□□□ 0.48
TNXB-209ENST00000613214 CCP110O43303 1012 aa18.06■□□□□ 0.48
TNXB-209ENST00000613214 ANKLE2Q86XL3 938 aa18.06■□□□□ 0.48
TNXB-209ENST00000613214 ANKRD1Q15327 319 aa18.06■□□□□ 0.48
TNXB-209ENST00000613214 PRPF40BQ6NWY9 871 aaKnown RBP18.06■□□□□ 0.48
TNXB-209ENST00000613214 THEMISQ8N1K5 641 aaPredicted RBP18.06■□□□□ 0.48
TNXB-209ENST00000613214 GSTTP1A0A1W2PQM5 241 aa18.06■□□□□ 0.48
TNXB-209ENST00000613214 RABEP1Q15276 862 aa18.06■□□□□ 0.48
TNXB-209ENST00000613214 NF2P35240 595 aa18.05■□□□□ 0.48
TNXB-209ENST00000613214 POTEJP0CG39 1038 aa18.05■□□□□ 0.48
TNXB-209ENST00000613214 CACNA2D4Q7Z3S7 1137 aa18.05■□□□□ 0.48
TNXB-209ENST00000613214 FERMT2Q96AC1 680 aa18.05■□□□□ 0.48
TNXB-209ENST00000613214 TRMT112Q9UI30 125 aaKnown RBP18.05■□□□□ 0.48
TNXB-209ENST00000613214 MAP2K1Q02750 393 aaPredicted RBP18.05■□□□□ 0.48
TNXB-209ENST00000613214 AEBP1Q8IUX7 1158 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 ZFP91Q96JP5 570 aaPredicted RBP18.04■□□□□ 0.48
TNXB-209ENST00000613214 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
TNXB-209ENST00000613214 CFAP45Q9UL16 551 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 ACSBG1Q96GR2 724 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 DPH6Q7L8W6 267 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 F6X3S4 739 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 CDKL5O76039 1030 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 CHD1LQ86WJ1 897 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 ZBTB3Q9H5J0 574 aa18.04■□□□□ 0.48
TNXB-209ENST00000613214 WDHD1O75717 1129 aaPredicted RBP18.03■□□□□ 0.48
TNXB-209ENST00000613214 NAPBQ9H115 298 aa18.03■□□□□ 0.48
TNXB-209ENST00000613214 K7ELQ4 463 aaPredicted RBP18.03■□□□□ 0.48
TNXB-209ENST00000613214 CTNNA2P26232 953 aa18.03■□□□□ 0.48
TNXB-209ENST00000613214 AKNAQ7Z591 1439 aa18.03■□□□□ 0.48
TNXB-209ENST00000613214 CUL5Q93034 780 aa18.03■□□□□ 0.48
TNXB-209ENST00000613214 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
TNXB-209ENST00000613214 GCC1Q96CN9 775 aa18.03■□□□□ 0.48
TNXB-209ENST00000613214 IFIT1P09914 478 aaKnown RBP18.03■□□□□ 0.48
TNXB-209ENST00000613214 PRPF4BQ13523 1007 aaKnown RBP18.03■□□□□ 0.48
TNXB-209ENST00000613214 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
TNXB-209ENST00000613214 RBM26Q5T8P6 1007 aaKnown RBP18.02■□□□□ 0.48
TNXB-209ENST00000613214 GNAT3A8MTJ3 354 aa18.02■□□□□ 0.48
TNXB-209ENST00000613214 KIF20AO95235 890 aa18.02■□□□□ 0.48
TNXB-209ENST00000613214 ZNF397Q8NF99 534 aaPredicted RBP18.02■□□□□ 0.48
TNXB-209ENST00000613214 UQCRHLA0A096LP55 91 aa18.02■□□□□ 0.48
TNXB-209ENST00000613214 MBD3O95983 291 aa18.02■□□□□ 0.48
TNXB-209ENST00000613214 UQCRHP07919 91 aa18.02■□□□□ 0.48
TNXB-209ENST00000613214 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
TNXB-209ENST00000613214 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.47
TNXB-209ENST00000613214 RGS22Q8NE09 1264 aa18.02■□□□□ 0.47
TNXB-209ENST00000613214 SNRKQ9NRH2 765 aa18.02■□□□□ 0.47
TNXB-209ENST00000613214 ZNF652Q9Y2D9 606 aa18.02■□□□□ 0.47
TNXB-209ENST00000613214 CBFA2T2O43439 604 aa18.01■□□□□ 0.47
TNXB-209ENST00000613214 NLRP5P59047 1200 aa18.01■□□□□ 0.47
TNXB-209ENST00000613214 TCERG1LQ5VWI1 586 aa18.01■□□□□ 0.47
TNXB-209ENST00000613214 SYCE3A1L190 88 aa18.01■□□□□ 0.47
TNXB-209ENST00000613214 ARL1P40616 181 aaPredicted RBP18.01■□□□□ 0.47
TNXB-209ENST00000613214 LARP1Q6PKG0 1096 aaKnown RBP18.01■□□□□ 0.47
TNXB-209ENST00000613214 TICAM2Q86XR7 235 aa18.01■□□□□ 0.47
TNXB-209ENST00000613214 HAND2P61296 217 aa18.01■□□□□ 0.47
TNXB-209ENST00000613214 ARHGAP29Q52LW3 1261 aa18.01■□□□□ 0.47
TNXB-209ENST00000613214 TDRD12Q587J7 1177 aaKnown RBP18.01■□□□□ 0.47
TNXB-209ENST00000613214 WDR33Q9C0J8 1336 aaKnown RBP18.01■□□□□ 0.47
TNXB-209ENST00000613214 BIN1O00499 593 aa18■□□□□ 0.47
TNXB-209ENST00000613214 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
TNXB-209ENST00000613214 MRPS9P82933 396 aaKnown RBP18■□□□□ 0.47
TNXB-209ENST00000613214 IQSEC3Q9UPP2 1182 aaPredicted RBP18■□□□□ 0.47
TNXB-209ENST00000613214 ATP5J2-PTCD1G3V325 749 aa18■□□□□ 0.47
TNXB-209ENST00000613214 CCDC150Q8NCX0 1101 aa18■□□□□ 0.47
TNXB-209ENST00000613214 PLS1Q14651 629 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 BICD1Q96G01 975 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
TNXB-209ENST00000613214 GOLGA6L7A0A1B0GV03 622 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 MAP3K9P80192 1104 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 TSG101Q99816 390 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 CTNNA3Q9UI47 895 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 SMC1AQ14683 1233 aaKnown RBP17.99■□□□□ 0.47
TNXB-209ENST00000613214 AKNAD1Q5T1N1 836 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 TRMT1Q9NXH9 659 aaKnown RBP17.99■□□□□ 0.47
TNXB-209ENST00000613214 SPA17Q15506 151 aa17.99■□□□□ 0.47
TNXB-209ENST00000613214 TSHZ3Q63HK5 1081 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 CCDC91Q7Z6B0 441 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 TMCO5BA8MYB1 307 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 CKAP2LQ8IYA6 745 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 TRERF1Q96PN7 1200 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 MCM2P49736 904 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 KAT6BQ8WYB5 2073 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 DUSP27Q5VZP5 1158 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 SYCP3Q8IZU3 236 aa17.98■□□□□ 0.47
TNXB-209ENST00000613214 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
TNXB-209ENST00000613214 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
TNXB-209ENST00000613214 FOXO3O43524 673 aa17.97■□□□□ 0.47
TNXB-209ENST00000613214 PRC1O43663 620 aa17.97■□□□□ 0.47
TNXB-209ENST00000613214 IFFO1Q0D2I5 559 aa17.97■□□□□ 0.47
TNXB-209ENST00000613214 CCDC148Q8NFR7 591 aa17.97■□□□□ 0.47
TNXB-209ENST00000613214 RBM25P49756 843 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms