RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PIGBQ92521 554 aa14.62□□□□□ -0.07
SSX3-204ENST00000612497 BRCA1P38398 1863 aaKnown RBP14.61□□□□□ -0.07
SSX3-204ENST00000612497 MAP2P11137 1827 aaKnown RBP14.61□□□□□ -0.07
SSX3-204ENST00000612497 ARFGEF1Q9Y6D6 1849 aa14.61□□□□□ -0.07
SSX3-204ENST00000612497 CYP27B1O15528 508 aa14.6□□□□□ -0.07
SSX3-204ENST00000612497 TMF1P82094 1093 aa14.6□□□□□ -0.07
SSX3-204ENST00000612497 CCDC87Q9NVE4 849 aa14.6□□□□□ -0.07
SSX3-204ENST00000612497 RNF181Q9P0P0 153 aa14.6□□□□□ -0.07
SSX3-204ENST00000612497 TNRC6CQ9HCJ0 1690 aaKnown RBP14.6□□□□□ -0.07
SSX3-204ENST00000612497 C10orf71Q711Q0 1435 aa14.59□□□□□ -0.07
SSX3-204ENST00000612497 SMG6Q86US8 1419 aaKnown RBP14.59□□□□□ -0.07
SSX3-204ENST00000612497 RRS1Q15050 365 aaKnown RBP14.59□□□□□ -0.07
SSX3-204ENST00000612497 NLGN1Q8N2Q7 840 aa14.59□□□□□ -0.07
SSX3-204ENST00000612497 ATP6V1AP38606 617 aa14.58□□□□□ -0.08
SSX3-204ENST00000612497 ITPK1Q13572 414 aa14.58□□□□□ -0.08
SSX3-204ENST00000612497 TRAPPC3LQ5T215 181 aa14.58□□□□□ -0.08
SSX3-204ENST00000612497 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
SSX3-204ENST00000612497 SBF1O95248 1867 aa14.57□□□□□ -0.08
SSX3-204ENST00000612497 PIM2Q9P1W9 311 aa14.57□□□□□ -0.08
SSX3-204ENST00000612497 C4AP0C0L4 1744 aa14.56□□□□□ -0.08
SSX3-204ENST00000612497 KCNA3P22001 575 aa14.56□□□□□ -0.08
SSX3-204ENST00000612497 DALRD3Q5D0E6 543 aaKnown RBP14.56□□□□□ -0.08
SSX3-204ENST00000612497 TMOD3Q9NYL9 352 aa14.56□□□□□ -0.08
SSX3-204ENST00000612497 RTCBQ9Y3I0 505 aaKnown RBP14.56□□□□□ -0.08
SSX3-204ENST00000612497 PARP3Q9Y6F1 533 aa14.56□□□□□ -0.08
SSX3-204ENST00000612497 DCAF5Q96JK2 942 aa14.55□□□□□ -0.08
SSX3-204ENST00000612497 ASAP1Q9ULH1 1129 aa14.55□□□□□ -0.08
SSX3-204ENST00000612497 HSP90AB2PQ58FF8 381 aa14.54□□□□□ -0.08
SSX3-204ENST00000612497 NKX1-1Q15270 411 aaPredicted RBP14.53□□□□□ -0.08
SSX3-204ENST00000612497 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
SSX3-204ENST00000612497 GYS1P13807 737 aa14.52□□□□□ -0.09
SSX3-204ENST00000612497 VEGFAP15692 232 aaPredicted RBP14.52□□□□□ -0.09
SSX3-204ENST00000612497 RFC4P35249 363 aa14.52□□□□□ -0.09
SSX3-204ENST00000612497 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
SSX3-204ENST00000612497 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
SSX3-204ENST00000612497 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
SSX3-204ENST00000612497 INSRP06213 1382 aa14.51□□□□□ -0.09
SSX3-204ENST00000612497 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
SSX3-204ENST00000612497 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
SSX3-204ENST00000612497 SIN3AQ96ST3 1273 aa14.5□□□□□ -0.09
SSX3-204ENST00000612497 GGNBP2Q9H3C7 697 aa14.5□□□□□ -0.09
SSX3-204ENST00000612497 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
SSX3-204ENST00000612497 CHRNA5P30532 468 aa14.49□□□□□ -0.09
SSX3-204ENST00000612497 ZC3H4Q9UPT8 1303 aaKnown RBP14.48□□□□□ -0.09
SSX3-204ENST00000612497 GLTPD2A6NH11 291 aa14.48□□□□□ -0.09
SSX3-204ENST00000612497 RASSF7Q02833 373 aa14.48□□□□□ -0.09
SSX3-204ENST00000612497 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
SSX3-204ENST00000612497 MKRN1Q9UHC7 482 aaKnown RBP14.48□□□□□ -0.09
SSX3-204ENST00000612497 CCDC88AQ3V6T2 1871 aa14.48□□□□□ -0.09
SSX3-204ENST00000612497 FLT4P35916 1363 aa14.47□□□□□ -0.09
SSX3-204ENST00000612497 FYB1O15117 783 aa14.47□□□□□ -0.09
SSX3-204ENST00000612497 FOXN1O15353 648 aa14.47□□□□□ -0.09
SSX3-204ENST00000612497 RPS6KA4O75676 772 aa14.47□□□□□ -0.09
SSX3-204ENST00000612497 MAPK8IP2Q13387 824 aaPredicted RBP14.47□□□□□ -0.09
SSX3-204ENST00000612497 RC3H1Q5TC82 1133 aaKnown RBP14.47□□□□□ -0.09
SSX3-204ENST00000612497 LMNB1P20700 586 aa14.46□□□□□ -0.09
SSX3-204ENST00000612497 PRDM10Q9NQV6 1147 aa14.46□□□□□ -0.09
SSX3-204ENST00000612497 MYH14Q7Z406 1995 aaKnown RBP14.45□□□□□ -0.1
SSX3-204ENST00000612497 CNTNAP4Q9C0A0 1308 aa14.45□□□□□ -0.1
SSX3-204ENST00000612497 COL5A3P25940 1745 aaPredicted RBP14.45□□□□□ -0.1
SSX3-204ENST00000612497 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
SSX3-204ENST00000612497 SLC4A9Q96Q91 983 aa14.45□□□□□ -0.1
SSX3-204ENST00000612497 KDRP35968 1356 aa14.45□□□□□ -0.1
SSX3-204ENST00000612497 PHKG2P15735 406 aa14.44□□□□□ -0.1
SSX3-204ENST00000612497 DDR1Q08345 913 aa14.44□□□□□ -0.1
SSX3-204ENST00000612497 FAM161AQ3B820 660 aa14.44□□□□□ -0.1
SSX3-204ENST00000612497 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
SSX3-204ENST00000612497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.44□□□□□ -0.1
SSX3-204ENST00000612497 PCDH10Q9P2E7 1040 aa14.44□□□□□ -0.1
SSX3-204ENST00000612497 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
SSX3-204ENST00000612497 KIF24Q5T7B8 1368 aa14.44□□□□□ -0.1
SSX3-204ENST00000612497 KDM6AO15550 1401 aaPredicted RBP14.43□□□□□ -0.1
SSX3-204ENST00000612497 FKBP8Q14318 412 aa14.43□□□□□ -0.1
SSX3-204ENST00000612497 AIDAQ96BJ3 306 aa14.43□□□□□ -0.1
SSX3-204ENST00000612497 TIAM2Q8IVF5 1701 aa14.43□□□□□ -0.1
SSX3-204ENST00000612497 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
SSX3-204ENST00000612497 PPM1GO15355 546 aaPredicted RBP14.42□□□□□ -0.1
SSX3-204ENST00000612497 CTCFP49711 727 aaPredicted RBP14.42□□□□□ -0.1
SSX3-204ENST00000612497 POTECB2RU33 542 aa14.41□□□□□ -0.1
SSX3-204ENST00000612497 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
SSX3-204ENST00000612497 EMILIN1Q9Y6C2 1016 aa14.41□□□□□ -0.1
SSX3-204ENST00000612497 KIF20BQ96Q89 1820 aa14.41□□□□□ -0.1
SSX3-204ENST00000612497 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
SSX3-204ENST00000612497 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
SSX3-204ENST00000612497 NCAPD2Q15021 1401 aa14.4□□□□□ -0.1
SSX3-204ENST00000612497 TONSLQ96HA7 1378 aa14.39□□□□□ -0.11
SSX3-204ENST00000612497 ERVV-2B6SEH9 535 aa14.39□□□□□ -0.11
SSX3-204ENST00000612497 POLRMTO00411 1230 aaKnown RBP14.39□□□□□ -0.11
SSX3-204ENST00000612497 TESK2Q96S53 571 aa14.39□□□□□ -0.11
SSX3-204ENST00000612497 EYA1Q99502 592 aa14.39□□□□□ -0.11
SSX3-204ENST00000612497 CNTNAP1P78357 1384 aa14.38□□□□□ -0.11
SSX3-204ENST00000612497 CRKLP46109 303 aaKnown RBP14.38□□□□□ -0.11
SSX3-204ENST00000612497 LBX1P52954 281 aa14.38□□□□□ -0.11
SSX3-204ENST00000612497 ABHD8Q96I13 439 aa14.38□□□□□ -0.11
SSX3-204ENST00000612497 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
SSX3-204ENST00000612497 PTCD1O75127 700 aaKnown RBP14.37□□□□□ -0.11
SSX3-204ENST00000612497 TM4SF1P30408 202 aa14.37□□□□□ -0.11
SSX3-204ENST00000612497 TTLL6Q8N841 843 aa14.37□□□□□ -0.11
SSX3-204ENST00000612497 AFDNP55196 1824 aaKnown RBP14.36□□□□□ -0.11
SSX3-204ENST00000612497 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms