RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 ITPK1Q13572 414 aa9.92□□□□□ -0.82
MUC1-221ENST00000610359 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
MUC1-221ENST00000610359 COL5A3P25940 1745 aaPredicted RBP9.91□□□□□ -0.82
MUC1-221ENST00000610359 MAP3K19Q56UN5 1328 aa9.91□□□□□ -0.82
MUC1-221ENST00000610359 GNPATO15228 680 aa9.91□□□□□ -0.82
MUC1-221ENST00000610359 PIGBQ92521 554 aa9.91□□□□□ -0.82
MUC1-221ENST00000610359 SMARCC1Q92922 1105 aaPredicted RBP9.91□□□□□ -0.82
MUC1-221ENST00000610359 MKRN1Q9UHC7 482 aaKnown RBP9.91□□□□□ -0.82
MUC1-221ENST00000610359 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
MUC1-221ENST00000610359 DICER1Q9UPY3 1922 aaKnown RBP9.91□□□□□ -0.82
MUC1-221ENST00000610359 CGNL1Q0VF96 1302 aa9.9□□□□□ -0.82
MUC1-221ENST00000610359 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
MUC1-221ENST00000610359 POTECB2RU33 542 aa9.9□□□□□ -0.82
MUC1-221ENST00000610359 CYP27B1O15528 508 aa9.9□□□□□ -0.82
MUC1-221ENST00000610359 SIK1P57059 783 aa9.9□□□□□ -0.82
MUC1-221ENST00000610359 CCDC87Q9NVE4 849 aa9.9□□□□□ -0.82
MUC1-221ENST00000610359 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.83
MUC1-221ENST00000610359 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.83
MUC1-221ENST00000610359 PCDH11XQ9BZA7 1347 aa9.89□□□□□ -0.83
MUC1-221ENST00000610359 PCDH11YQ9BZA8 1340 aa9.89□□□□□ -0.83
MUC1-221ENST00000610359 VEGFAP15692 232 aaPredicted RBP9.89□□□□□ -0.83
MUC1-221ENST00000610359 TMF1P82094 1093 aa9.89□□□□□ -0.83
MUC1-221ENST00000610359 RASSF7Q02833 373 aa9.89□□□□□ -0.83
MUC1-221ENST00000610359 NLGN1Q8N2Q7 840 aa9.89□□□□□ -0.83
MUC1-221ENST00000610359 ABHD8Q96I13 439 aa9.89□□□□□ -0.83
MUC1-221ENST00000610359 PIM2Q9P1W9 311 aa9.89□□□□□ -0.83
MUC1-221ENST00000610359 GLTPD2A6NH11 291 aa9.88□□□□□ -0.83
MUC1-221ENST00000610359 GYS1P13807 737 aa9.88□□□□□ -0.83
MUC1-221ENST00000610359 DALRD3Q5D0E6 543 aaKnown RBP9.88□□□□□ -0.83
MUC1-221ENST00000610359 RAPGEF4Q8WZA2 1011 aa9.88□□□□□ -0.83
MUC1-221ENST00000610359 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
MUC1-221ENST00000610359 AFDNP55196 1824 aaKnown RBP9.88□□□□□ -0.83
MUC1-221ENST00000610359 DLEC1Q9Y238 1755 aa9.88□□□□□ -0.83
MUC1-221ENST00000610359 A0A1W2PP64 1363 aa9.88□□□□□ -0.83
MUC1-221ENST00000610359 ZNF831Q5JPB2 1677 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 TATP17735 454 aaPredicted RBP9.87□□□□□ -0.83
MUC1-221ENST00000610359 CHRNA5P30532 468 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 ATP6V1AP38606 617 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 AMPHP49418 695 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 CTCFP49711 727 aaPredicted RBP9.87□□□□□ -0.83
MUC1-221ENST00000610359 RGS19P49795 217 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 LBX1P52954 281 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 CNKSR2Q8WXI2 1034 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
MUC1-221ENST00000610359 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 ASAP1Q9ULH1 1129 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 CNTNAP1P78357 1384 aa9.87□□□□□ -0.83
MUC1-221ENST00000610359 ZC3H4Q9UPT8 1303 aaKnown RBP9.86□□□□□ -0.83
MUC1-221ENST00000610359 MLLT1Q03111 559 aaPredicted RBP9.86□□□□□ -0.83
MUC1-221ENST00000610359 TRAPPC3LQ5T215 181 aa9.86□□□□□ -0.83
MUC1-221ENST00000610359 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
MUC1-221ENST00000610359 PARP3Q9Y6F1 533 aa9.86□□□□□ -0.83
MUC1-221ENST00000610359 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
MUC1-221ENST00000610359 HDGFL2Q7Z4V5 671 aaPredicted RBP9.85□□□□□ -0.83
MUC1-221ENST00000610359 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
MUC1-221ENST00000610359 WBP1LQ9NX94 342 aa9.85□□□□□ -0.83
MUC1-221ENST00000610359 KDRP35968 1356 aa9.85□□□□□ -0.83
MUC1-221ENST00000610359 POTEIP0CG38 1075 aa9.84□□□□□ -0.83
MUC1-221ENST00000610359 POTEJP0CG39 1038 aa9.84□□□□□ -0.83
MUC1-221ENST00000610359 VEGFBP49765 207 aa9.84□□□□□ -0.83
MUC1-221ENST00000610359 DDR1Q08345 913 aa9.84□□□□□ -0.83
MUC1-221ENST00000610359 RRS1Q15050 365 aaKnown RBP9.84□□□□□ -0.83
MUC1-221ENST00000610359 ATG3Q9NT62 314 aa9.84□□□□□ -0.83
MUC1-221ENST00000610359 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
MUC1-221ENST00000610359 RTL1A6NKG5 1358 aa9.84□□□□□ -0.83
MUC1-221ENST00000610359 ADAMTS7Q9UKP4 1686 aa9.83□□□□□ -0.84
MUC1-221ENST00000610359 FER1L6Q2WGJ9 1857 aa9.83□□□□□ -0.84
MUC1-221ENST00000610359 HSPA8P11142 646 aaKnown RBP9.83□□□□□ -0.84
MUC1-221ENST00000610359 LMNB1P20700 586 aa9.83□□□□□ -0.84
MUC1-221ENST00000610359 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
MUC1-221ENST00000610359 CCDC85CA6NKD9 419 aa9.82□□□□□ -0.84
MUC1-221ENST00000610359 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
MUC1-221ENST00000610359 COG3Q96JB2 828 aa9.82□□□□□ -0.84
MUC1-221ENST00000610359 CASP8AP2Q9UKL3 1982 aa9.82□□□□□ -0.84
MUC1-221ENST00000610359 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
MUC1-221ENST00000610359 PASKQ96RG2 1323 aa9.82□□□□□ -0.84
MUC1-221ENST00000610359 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
MUC1-221ENST00000610359 RPS6KA4O75676 772 aa9.81□□□□□ -0.84
MUC1-221ENST00000610359 RFC4P35249 363 aa9.81□□□□□ -0.84
MUC1-221ENST00000610359 FKBP8Q14318 412 aa9.81□□□□□ -0.84
MUC1-221ENST00000610359 HSP90AB2PQ58FF8 381 aa9.81□□□□□ -0.84
MUC1-221ENST00000610359 RC3H1Q5TC82 1133 aaKnown RBP9.81□□□□□ -0.84
MUC1-221ENST00000610359 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
MUC1-221ENST00000610359 TERF2IPQ9NYB0 399 aa9.81□□□□□ -0.84
MUC1-221ENST00000610359 TMOD3Q9NYL9 352 aa9.81□□□□□ -0.84
MUC1-221ENST00000610359 SRP68Q9UHB9 627 aaKnown RBP9.81□□□□□ -0.84
MUC1-221ENST00000610359 SMG6Q86US8 1419 aaKnown RBP9.81□□□□□ -0.84
MUC1-221ENST00000610359 SCN4AP35499 1836 aa9.8□□□□□ -0.84
MUC1-221ENST00000610359 NFKBIEO00221 500 aa9.8□□□□□ -0.84
MUC1-221ENST00000610359 NCAPD2Q15021 1401 aa9.8□□□□□ -0.84
MUC1-221ENST00000610359 CNTNAP4Q9C0A0 1308 aa9.8□□□□□ -0.84
MUC1-221ENST00000610359 INSRP06213 1382 aa9.79□□□□□ -0.84
MUC1-221ENST00000610359 CACNA1SQ13698 1873 aa9.79□□□□□ -0.84
MUC1-221ENST00000610359 POLRMTO00411 1230 aaKnown RBP9.79□□□□□ -0.84
MUC1-221ENST00000610359 TJP1Q07157 1748 aa9.79□□□□□ -0.84
MUC1-221ENST00000610359 ANKRD31Q8N7Z5 1873 aa9.79□□□□□ -0.84
MUC1-221ENST00000610359 KIF20BQ96Q89 1820 aa9.78□□□□□ -0.84
MUC1-221ENST00000610359 TM4SF1P30408 202 aa9.78□□□□□ -0.84
MUC1-221ENST00000610359 USP42Q9H9J4 1324 aaKnown RBP9.78□□□□□ -0.84
MUC1-221ENST00000610359 THSD7BQ9C0I4 1608 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms