RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
LINC01278-206ENST00000610088 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
LINC01278-206ENST00000610088 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
LINC01278-206ENST00000610088 MLLT1Q03111 559 aaPredicted RBP17.97■□□□□ 0.47
LINC01278-206ENST00000610088 USHBP1Q8N6Y0 703 aa17.97■□□□□ 0.47
LINC01278-206ENST00000610088 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
LINC01278-206ENST00000610088 PIM2Q9P1W9 311 aa17.97■□□□□ 0.47
LINC01278-206ENST00000610088 KIF20BQ96Q89 1820 aa17.97■□□□□ 0.47
LINC01278-206ENST00000610088 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
LINC01278-206ENST00000610088 CTCFP49711 727 aaPredicted RBP17.96■□□□□ 0.47
LINC01278-206ENST00000610088 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
LINC01278-206ENST00000610088 RAPGEF4Q8WZA2 1011 aa17.96■□□□□ 0.47
LINC01278-206ENST00000610088 ABHD8Q96I13 439 aa17.96■□□□□ 0.47
LINC01278-206ENST00000610088 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
LINC01278-206ENST00000610088 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
LINC01278-206ENST00000610088 KCNA3P22001 575 aa17.95■□□□□ 0.46
LINC01278-206ENST00000610088 AMPHP49418 695 aa17.95■□□□□ 0.46
LINC01278-206ENST00000610088 COG3Q96JB2 828 aa17.95■□□□□ 0.46
LINC01278-206ENST00000610088 HOXC9P31274 260 aa17.94■□□□□ 0.46
LINC01278-206ENST00000610088 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
LINC01278-206ENST00000610088 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
LINC01278-206ENST00000610088 SIK1P57059 783 aa17.93■□□□□ 0.46
LINC01278-206ENST00000610088 NLGN1Q8N2Q7 840 aa17.93■□□□□ 0.46
LINC01278-206ENST00000610088 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
LINC01278-206ENST00000610088 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
LINC01278-206ENST00000610088 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
LINC01278-206ENST00000610088 LBX1P52954 281 aa17.92■□□□□ 0.46
LINC01278-206ENST00000610088 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
LINC01278-206ENST00000610088 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
LINC01278-206ENST00000610088 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
LINC01278-206ENST00000610088 CCDC85CA6NKD9 419 aa17.91■□□□□ 0.46
LINC01278-206ENST00000610088 RASSF7Q02833 373 aa17.91■□□□□ 0.46
LINC01278-206ENST00000610088 TRAPPC3LQ5T215 181 aa17.91■□□□□ 0.46
LINC01278-206ENST00000610088 PIGBQ92521 554 aa17.91■□□□□ 0.46
LINC01278-206ENST00000610088 CREBZFQ9NS37 354 aa17.91■□□□□ 0.46
LINC01278-206ENST00000610088 RGPD2P0DJD1 1756 aa17.9■□□□□ 0.46
LINC01278-206ENST00000610088 GLTPD2A6NH11 291 aa17.9■□□□□ 0.46
LINC01278-206ENST00000610088 FBLN1P23142 703 aa17.9■□□□□ 0.46
LINC01278-206ENST00000610088 ATP6V1AP38606 617 aa17.9■□□□□ 0.46
LINC01278-206ENST00000610088 ITPK1Q13572 414 aa17.9■□□□□ 0.46
LINC01278-206ENST00000610088 POLR3GLQ9BT43 218 aa17.9■□□□□ 0.46
LINC01278-206ENST00000610088 MAP3K19Q56UN5 1328 aa17.9■□□□□ 0.46
LINC01278-206ENST00000610088 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
LINC01278-206ENST00000610088 BRCA1P38398 1863 aaKnown RBP17.88■□□□□ 0.45
LINC01278-206ENST00000610088 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
LINC01278-206ENST00000610088 CYP27B1O15528 508 aa17.87■□□□□ 0.45
LINC01278-206ENST00000610088 CHRNA5P30532 468 aa17.87■□□□□ 0.45
LINC01278-206ENST00000610088 ZC3H4Q9UPT8 1303 aaKnown RBP17.87■□□□□ 0.45
LINC01278-206ENST00000610088 CNTNAP1P78357 1384 aa17.86■□□□□ 0.45
LINC01278-206ENST00000610088 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
LINC01278-206ENST00000610088 GYS1P13807 737 aa17.85■□□□□ 0.45
LINC01278-206ENST00000610088 RFC4P35249 363 aa17.85■□□□□ 0.45
LINC01278-206ENST00000610088 ARHGEF1Q92888 912 aaKnown RBP17.85■□□□□ 0.45
LINC01278-206ENST00000610088 GGNBP2Q9H3C7 697 aa17.85■□□□□ 0.45
LINC01278-206ENST00000610088 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
LINC01278-206ENST00000610088 LMNB1P20700 586 aa17.84■□□□□ 0.45
LINC01278-206ENST00000610088 EIF4G2P78344 907 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC01278-206ENST00000610088 SBF1O95248 1867 aa17.84■□□□□ 0.45
LINC01278-206ENST00000610088 VEGFBP49765 207 aa17.83■□□□□ 0.44
LINC01278-206ENST00000610088 CFAP44Q96MT7 982 aa17.83■□□□□ 0.44
LINC01278-206ENST00000610088 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.44
LINC01278-206ENST00000610088 ITGB4P16144 1822 aa17.82■□□□□ 0.44
LINC01278-206ENST00000610088 POTECB2RU33 542 aa17.82■□□□□ 0.44
LINC01278-206ENST00000610088 FYB1O15117 783 aa17.82■□□□□ 0.44
LINC01278-206ENST00000610088 CHADLQ6NUI6 762 aa17.82■□□□□ 0.44
LINC01278-206ENST00000610088 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
LINC01278-206ENST00000610088 HSPA8P11142 646 aaKnown RBP17.81■□□□□ 0.44
LINC01278-206ENST00000610088 RGS19P49795 217 aa17.81■□□□□ 0.44
LINC01278-206ENST00000610088 WBP1LQ9NX94 342 aa17.81■□□□□ 0.44
LINC01278-206ENST00000610088 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
LINC01278-206ENST00000610088 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
LINC01278-206ENST00000610088 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
LINC01278-206ENST00000610088 ADRA2BP18089 450 aa17.79■□□□□ 0.44
LINC01278-206ENST00000610088 DPY19L2Q6NUT2 758 aa17.79■□□□□ 0.44
LINC01278-206ENST00000610088 KDM6AO15550 1401 aaPredicted RBP17.79■□□□□ 0.44
LINC01278-206ENST00000610088 POTEIP0CG38 1075 aa17.78■□□□□ 0.44
LINC01278-206ENST00000610088 POTEJP0CG39 1038 aa17.78■□□□□ 0.44
LINC01278-206ENST00000610088 ANKRD26Q9UPS8 1709 aa17.78■□□□□ 0.44
LINC01278-206ENST00000610088 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.44
LINC01278-206ENST00000610088 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
LINC01278-206ENST00000610088 ATG3Q9NT62 314 aa17.77■□□□□ 0.44
LINC01278-206ENST00000610088 DDR1Q08345 913 aa17.76■□□□□ 0.43
LINC01278-206ENST00000610088 FKBP8Q14318 412 aa17.75■□□□□ 0.43
LINC01278-206ENST00000610088 CARD14Q9BXL6 1004 aa17.75■□□□□ 0.43
LINC01278-206ENST00000610088 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
LINC01278-206ENST00000610088 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
LINC01278-206ENST00000610088 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
LINC01278-206ENST00000610088 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
LINC01278-206ENST00000610088 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
LINC01278-206ENST00000610088 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
LINC01278-206ENST00000610088 RC3H1Q5TC82 1133 aaKnown RBP17.73■□□□□ 0.43
LINC01278-206ENST00000610088 SPG7Q9UQ90 795 aa17.73■□□□□ 0.43
LINC01278-206ENST00000610088 FLT4P35916 1363 aa17.73■□□□□ 0.43
LINC01278-206ENST00000610088 TIAM2Q8IVF5 1701 aa17.72■□□□□ 0.43
LINC01278-206ENST00000610088 KIF24Q5T7B8 1368 aa17.72■□□□□ 0.43
LINC01278-206ENST00000610088 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
LINC01278-206ENST00000610088 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
LINC01278-206ENST00000610088 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
LINC01278-206ENST00000610088 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.42
LINC01278-206ENST00000610088 INSRP06213 1382 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms