RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 SIK1P57059 783 aa13.26□□□□□ -0.29
CTCFL-220ENST00000608858 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
CTCFL-220ENST00000608858 PIM2Q9P1W9 311 aa13.26□□□□□ -0.29
CTCFL-220ENST00000608858 KIAA1210Q9ULL0 1709 aa13.25□□□□□ -0.29
CTCFL-220ENST00000608858 CYP27B1O15528 508 aa13.25□□□□□ -0.29
CTCFL-220ENST00000608858 HMGB2P26583 209 aaKnown RBP13.25□□□□□ -0.29
CTCFL-220ENST00000608858 RRS1Q15050 365 aaKnown RBP13.25□□□□□ -0.29
CTCFL-220ENST00000608858 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
CTCFL-220ENST00000608858 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
CTCFL-220ENST00000608858 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
CTCFL-220ENST00000608858 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-220ENST00000608858 VEGFAP15692 232 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-220ENST00000608858 CHRNA5P30532 468 aa13.24□□□□□ -0.29
CTCFL-220ENST00000608858 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
CTCFL-220ENST00000608858 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
CTCFL-220ENST00000608858 UBR3Q6ZT12 1888 aa13.24□□□□□ -0.29
CTCFL-220ENST00000608858 TOGARAM1Q9Y4F4 1720 aa13.24□□□□□ -0.29
CTCFL-220ENST00000608858 RASSF7Q02833 373 aa13.23□□□□□ -0.29
CTCFL-220ENST00000608858 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-220ENST00000608858 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
CTCFL-220ENST00000608858 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
CTCFL-220ENST00000608858 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
CTCFL-220ENST00000608858 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
CTCFL-220ENST00000608858 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
CTCFL-220ENST00000608858 COG3Q96JB2 828 aa13.21□□□□□ -0.29
CTCFL-220ENST00000608858 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
CTCFL-220ENST00000608858 KIAA1551Q9HCM1 1747 aa13.21□□□□□ -0.3
CTCFL-220ENST00000608858 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
CTCFL-220ENST00000608858 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
CTCFL-220ENST00000608858 GYS1P13807 737 aa13.2□□□□□ -0.3
CTCFL-220ENST00000608858 RFC4P35249 363 aa13.2□□□□□ -0.3
CTCFL-220ENST00000608858 LBX1P52954 281 aa13.2□□□□□ -0.3
CTCFL-220ENST00000608858 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
CTCFL-220ENST00000608858 MON2Q7Z3U7 1717 aa13.19□□□□□ -0.3
CTCFL-220ENST00000608858 FAM208AQ9UK61 1670 aaKnown RBP13.19□□□□□ -0.3
CTCFL-220ENST00000608858 GLTPD2A6NH11 291 aa13.19□□□□□ -0.3
CTCFL-220ENST00000608858 POTECB2RU33 542 aa13.19□□□□□ -0.3
CTCFL-220ENST00000608858 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
CTCFL-220ENST00000608858 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
CTCFL-220ENST00000608858 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
CTCFL-220ENST00000608858 TERF2IPQ9NYB0 399 aa13.19□□□□□ -0.3
CTCFL-220ENST00000608858 CGNL1Q0VF96 1302 aa13.18□□□□□ -0.3
CTCFL-220ENST00000608858 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
CTCFL-220ENST00000608858 PRDM10Q9NQV6 1147 aa13.18□□□□□ -0.3
CTCFL-220ENST00000608858 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
CTCFL-220ENST00000608858 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
CTCFL-220ENST00000608858 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
CTCFL-220ENST00000608858 ITGB4P16144 1822 aa13.18□□□□□ -0.3
CTCFL-220ENST00000608858 C10orf71Q711Q0 1435 aa13.17□□□□□ -0.3
CTCFL-220ENST00000608858 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-220ENST00000608858 CTCFP49711 727 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-220ENST00000608858 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
CTCFL-220ENST00000608858 SRP68Q9UHB9 627 aaKnown RBP13.17□□□□□ -0.3
CTCFL-220ENST00000608858 KIF13BQ9NQT8 1826 aa13.17□□□□□ -0.3
CTCFL-220ENST00000608858 SBF1O95248 1867 aa13.16□□□□□ -0.3
CTCFL-220ENST00000608858 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
CTCFL-220ENST00000608858 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
CTCFL-220ENST00000608858 MLLT1Q03111 559 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-220ENST00000608858 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
CTCFL-220ENST00000608858 ROCK2O75116 1388 aaKnown RBP13.16□□□□□ -0.3
CTCFL-220ENST00000608858 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
CTCFL-220ENST00000608858 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
CTCFL-220ENST00000608858 DSG3P32926 999 aa13.15□□□□□ -0.3
CTCFL-220ENST00000608858 FKBP8Q14318 412 aa13.15□□□□□ -0.3
CTCFL-220ENST00000608858 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
CTCFL-220ENST00000608858 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
CTCFL-220ENST00000608858 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
CTCFL-220ENST00000608858 LMNB1P20700 586 aa13.14□□□□□ -0.31
CTCFL-220ENST00000608858 VEGFBP49765 207 aa13.14□□□□□ -0.31
CTCFL-220ENST00000608858 DDR1Q08345 913 aa13.14□□□□□ -0.31
CTCFL-220ENST00000608858 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
CTCFL-220ENST00000608858 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
CTCFL-220ENST00000608858 SIN3AQ96ST3 1273 aa13.14□□□□□ -0.31
CTCFL-220ENST00000608858 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-220ENST00000608858 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
CTCFL-220ENST00000608858 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
CTCFL-220ENST00000608858 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
CTCFL-220ENST00000608858 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
CTCFL-220ENST00000608858 ARFGEF1Q9Y6D6 1849 aa13.12□□□□□ -0.31
CTCFL-220ENST00000608858 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-220ENST00000608858 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
CTCFL-220ENST00000608858 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
CTCFL-220ENST00000608858 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
CTCFL-220ENST00000608858 SPG7Q9UQ90 795 aa13.12□□□□□ -0.31
CTCFL-220ENST00000608858 C4AP0C0L4 1744 aa13.11□□□□□ -0.31
CTCFL-220ENST00000608858 PPM1GO15355 546 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-220ENST00000608858 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
CTCFL-220ENST00000608858 FYB1O15117 783 aa13.09□□□□□ -0.31
CTCFL-220ENST00000608858 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
CTCFL-220ENST00000608858 CCDC88AQ3V6T2 1871 aa13.09□□□□□ -0.31
CTCFL-220ENST00000608858 RC3H1Q5TC82 1133 aaKnown RBP13.09□□□□□ -0.31
CTCFL-220ENST00000608858 CNTNAP1P78357 1384 aa13.08□□□□□ -0.31
CTCFL-220ENST00000608858 SMG6Q86US8 1419 aaKnown RBP13.08□□□□□ -0.32
CTCFL-220ENST00000608858 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-220ENST00000608858 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
CTCFL-220ENST00000608858 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
CTCFL-220ENST00000608858 NFKBIEO00221 500 aa13.07□□□□□ -0.32
CTCFL-220ENST00000608858 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
CTCFL-220ENST00000608858 PHKG2P15735 406 aa13.07□□□□□ -0.32
CTCFL-220ENST00000608858 TM4SF1P30408 202 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms