RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 NR1H3Q13133 447 aa5.86□□□□□ -1.47
HMGB1P50-201ENST00000605814 NEUROD2Q15784 382 aa5.86□□□□□ -1.47
HMGB1P50-201ENST00000605814 PGBD3Q8N328 593 aa5.86□□□□□ -1.47
HMGB1P50-201ENST00000605814 RRAGCQ9HB90 399 aa5.86□□□□□ -1.47
HMGB1P50-201ENST00000605814 GPAMQ9HCL2 828 aa5.86□□□□□ -1.47
HMGB1P50-201ENST00000605814 RAB6BQ9NRW1 208 aa5.86□□□□□ -1.47
HMGB1P50-201ENST00000605814 F11P03951 625 aa5.85□□□□□ -1.47
HMGB1P50-201ENST00000605814 MAP2K3P46734 347 aa5.85□□□□□ -1.47
HMGB1P50-201ENST00000605814 GNASQ5JWF2 1037 aa5.85□□□□□ -1.47
HMGB1P50-201ENST00000605814 GOPCQ9HD26 462 aa5.85□□□□□ -1.47
HMGB1P50-201ENST00000605814 NDUFB9Q9Y6M9 179 aa5.85□□□□□ -1.47
HMGB1P50-201ENST00000605814 AMPD1P23109 780 aa5.84□□□□□ -1.47
HMGB1P50-201ENST00000605814 PHKA2P46019 1235 aa5.84□□□□□ -1.47
HMGB1P50-201ENST00000605814 PLA2G4EQ3MJ16 856 aa5.84□□□□□ -1.47
HMGB1P50-201ENST00000605814 TMEM214Q6NUQ4 689 aaKnown RBP5.84□□□□□ -1.47
HMGB1P50-201ENST00000605814 ACDQ96AP0 544 aa5.84□□□□□ -1.47
HMGB1P50-201ENST00000605814 DCAF5Q96JK2 942 aa5.84□□□□□ -1.47
HMGB1P50-201ENST00000605814 SPATA31C2B4DYI2 1134 aa5.83□□□□□ -1.48
HMGB1P50-201ENST00000605814 SCTRP47872 440 aa5.83□□□□□ -1.48
HMGB1P50-201ENST00000605814 WDR44Q5JSH3 913 aa5.83□□□□□ -1.48
HMGB1P50-201ENST00000605814 IL27Q8NEV9 243 aa5.83□□□□□ -1.48
HMGB1P50-201ENST00000605814 ZSCAN10Q96SZ4 725 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P50-201ENST00000605814 OXCT2Q9BYC2 517 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P50-201ENST00000605814 GRIP2Q9C0E4 1043 aa5.83□□□□□ -1.48
HMGB1P50-201ENST00000605814 A0A1B0GTH6 734 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 GNRH1P01148 92 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 ESCO1Q5FWF5 840 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 EFHC2Q5JST6 749 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 ERICH6BQ5W0A0 696 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 CNKSR1Q969H4 720 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 GJD4Q96KN9 370 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 SPOCK3Q9BQ16 436 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 LRRC4BQ9NT99 713 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 MKL2Q9ULH7 1088 aa5.82□□□□□ -1.48
HMGB1P50-201ENST00000605814 PIK3R2O00459 728 aa5.81□□□□□ -1.48
HMGB1P50-201ENST00000605814 OIP5O43482 229 aa5.81□□□□□ -1.48
HMGB1P50-201ENST00000605814 ESYT1Q9BSJ8 1104 aa5.81□□□□□ -1.48
HMGB1P50-201ENST00000605814 OSBPL3Q9H4L5 887 aa5.81□□□□□ -1.48
HMGB1P50-201ENST00000605814 PRM3Q9NNZ6 103 aa5.81□□□□□ -1.48
HMGB1P50-201ENST00000605814 GDF2Q9UK05 429 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P50-201ENST00000605814 FANCIQ9NVI1 1328 aa5.8□□□□□ -1.48
HMGB1P50-201ENST00000605814 BMP4P12644 408 aa5.8□□□□□ -1.48
HMGB1P50-201ENST00000605814 CENPCQ03188 943 aa5.8□□□□□ -1.48
HMGB1P50-201ENST00000605814 CFHR5Q9BXR6 569 aa5.8□□□□□ -1.48
HMGB1P50-201ENST00000605814 LBRQ14739 615 aaKnown RBP5.79□□□□□ -1.48
HMGB1P50-201ENST00000605814 GOLGA6L1Q8N7Z2 621 aa5.79□□□□□ -1.48
HMGB1P50-201ENST00000605814 RUBCNLQ9H714 662 aa5.79□□□□□ -1.48
HMGB1P50-201ENST00000605814 RBM19Q9Y4C8 960 aaKnown RBP5.79□□□□□ -1.48
HMGB1P50-201ENST00000605814 TRAK2O60296 914 aa5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 ADAM23O75077 832 aa5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 IL2RAP01589 272 aa5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 GRIN2CQ14957 1233 aa5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 SLFNL1Q499Z3 407 aa5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 BANK1Q8NDB2 785 aa5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 YTHDC1Q96MU7 727 aaKnown RBP5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 DOLKQ9UPQ8 538 aa5.78□□□□□ -1.48
HMGB1P50-201ENST00000605814 K7ELQ4 463 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 EIF4G2P78344 907 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 USP4Q13107 963 aa5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 TLR1Q15399 786 aa5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 TBC1D9Q6ZT07 1266 aa5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 ALYREFQ86V81 257 aaKnown RBP5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 EDARADDQ8WWZ3 215 aa5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 KLRG1Q96E93 195 aa5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 SIRT1Q96EB6 747 aa5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 ATXN7L1Q9ULK2 861 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P50-201ENST00000605814 RB1CC1Q8TDY2 1594 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 FGFR3P22607 806 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 PLA2G4AP47712 749 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 SNRPNP63162 240 aaKnown RBP5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 C4orf17Q53FE4 359 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 OXLD1Q5BKU9 147 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 RHBDD1Q8TEB9 315 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 ABHD17AQ96GS6 310 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 CEP126Q9P2H0 1117 aa5.76□□□□□ -1.49
HMGB1P50-201ENST00000605814 ABCC9O60706 1549 aa5.75□□□□□ -1.49
HMGB1P50-201ENST00000605814 SHISA8B8ZZ34 492 aa5.75□□□□□ -1.49
HMGB1P50-201ENST00000605814 MSX1P28360 303 aa5.75□□□□□ -1.49
HMGB1P50-201ENST00000605814 FIGNL1Q6PIW4 674 aa5.75□□□□□ -1.49
HMGB1P50-201ENST00000605814 RNF135Q8IUD6 432 aa5.75□□□□□ -1.49
HMGB1P50-201ENST00000605814 MTMR14Q8NCE2 650 aa5.75□□□□□ -1.49
HMGB1P50-201ENST00000605814 CDCA7Q9BWT1 371 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P50-201ENST00000605814 SOCS7O14512 581 aa5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 PROCP04070 461 aa5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 AIDAQ96BJ3 306 aa5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 XAGE2Q96GT9 111 aa5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 CCDC85AQ96PX6 553 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 NOP53Q9NZM5 478 aaKnown RBP5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 GGA1Q9UJY5 639 aa5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 GJA3Q9Y6H8 435 aa5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 RSF1Q96T23 1441 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P50-201ENST00000605814 GNB5O14775 395 aa5.73□□□□□ -1.49
HMGB1P50-201ENST00000605814 BAG6P46379 1132 aa5.73□□□□□ -1.49
HMGB1P50-201ENST00000605814 SLCO4C1Q6ZQN7 724 aa5.73□□□□□ -1.49
HMGB1P50-201ENST00000605814 UBE2Q2Q8WVN8 375 aa5.73□□□□□ -1.49
HMGB1P50-201ENST00000605814 SNRKQ9NRH2 765 aa5.73□□□□□ -1.49
HMGB1P50-201ENST00000605814 KRBA1A5PL33 1030 aa5.72□□□□□ -1.49
HMGB1P50-201ENST00000605814 NBPF1Q3BBV0 1214 aa5.72□□□□□ -1.49
HMGB1P50-201ENST00000605814 ARSJQ5FYB0 599 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P50-201ENST00000605814 FHDC1Q9C0D6 1143 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms