RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
RNF40-212ENST00000602784 RIPK4P57078 832 aa18.3■□□□□ 0.52
RNF40-212ENST00000602784 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
RNF40-212ENST00000602784 TEFQ10587 303 aa18.3■□□□□ 0.52
RNF40-212ENST00000602784 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
RNF40-212ENST00000602784 ASAP1Q9ULH1 1129 aa18.3■□□□□ 0.52
RNF40-212ENST00000602784 RREB1Q92766 1687 aa18.3■□□□□ 0.52
RNF40-212ENST00000602784 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
RNF40-212ENST00000602784 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
RNF40-212ENST00000602784 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
RNF40-212ENST00000602784 LY75O60449 1722 aa18.29■□□□□ 0.52
RNF40-212ENST00000602784 MCM10Q7L590 875 aa18.28■□□□□ 0.52
RNF40-212ENST00000602784 MIER1Q8N108 512 aa18.28■□□□□ 0.52
RNF40-212ENST00000602784 APAF1O14727 1248 aa18.26■□□□□ 0.51
RNF40-212ENST00000602784 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
RNF40-212ENST00000602784 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
RNF40-212ENST00000602784 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
RNF40-212ENST00000602784 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
RNF40-212ENST00000602784 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
RNF40-212ENST00000602784 SIK1P57059 783 aa18.25■□□□□ 0.51
RNF40-212ENST00000602784 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
RNF40-212ENST00000602784 CCNL1Q9UK58 526 aaPredicted RBP18.25■□□□□ 0.51
RNF40-212ENST00000602784 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
RNF40-212ENST00000602784 NUP188Q5SRE5 1749 aa18.24■□□□□ 0.51
RNF40-212ENST00000602784 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
RNF40-212ENST00000602784 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
RNF40-212ENST00000602784 NBPF14Q5TI25 921 aa18.24■□□□□ 0.51
RNF40-212ENST00000602784 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
RNF40-212ENST00000602784 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
RNF40-212ENST00000602784 PAPPAQ13219 1627 aa18.23■□□□□ 0.51
RNF40-212ENST00000602784 BTBD11A6QL63 1104 aa18.22■□□□□ 0.51
RNF40-212ENST00000602784 ZNF790Q6PG37 636 aa18.22■□□□□ 0.51
RNF40-212ENST00000602784 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
RNF40-212ENST00000602784 SLC39A6Q13433 755 aa18.21■□□□□ 0.51
RNF40-212ENST00000602784 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
RNF40-212ENST00000602784 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.51
RNF40-212ENST00000602784 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
RNF40-212ENST00000602784 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
RNF40-212ENST00000602784 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
RNF40-212ENST00000602784 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
RNF40-212ENST00000602784 KCNQ4P56696 695 aa18.2■□□□□ 0.5
RNF40-212ENST00000602784 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
RNF40-212ENST00000602784 SLC4A9Q96Q91 983 aa18.2■□□□□ 0.5
RNF40-212ENST00000602784 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
RNF40-212ENST00000602784 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
RNF40-212ENST00000602784 UBR2Q8IWV8 1755 aa18.18■□□□□ 0.5
RNF40-212ENST00000602784 CALD1Q05682 793 aaKnown RBP18.18■□□□□ 0.5
RNF40-212ENST00000602784 ITPK1Q13572 414 aa18.18■□□□□ 0.5
RNF40-212ENST00000602784 SLC15A2Q16348 729 aa18.18■□□□□ 0.5
RNF40-212ENST00000602784 AKT1S1Q96B36 256 aa18.18■□□□□ 0.5
RNF40-212ENST00000602784 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
RNF40-212ENST00000602784 STK32BQ9NY57 414 aa18.18■□□□□ 0.5
RNF40-212ENST00000602784 CICQ96RK0 1608 aaPredicted RBP18.17■□□□□ 0.5
RNF40-212ENST00000602784 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
RNF40-212ENST00000602784 FMNL2Q96PY5 1086 aa18.17■□□□□ 0.5
RNF40-212ENST00000602784 C5P01031 1676 aa18.17■□□□□ 0.5
RNF40-212ENST00000602784 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
RNF40-212ENST00000602784 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
RNF40-212ENST00000602784 TEX13AQ9BXU3 409 aaPredicted RBP18.16■□□□□ 0.5
RNF40-212ENST00000602784 CHL1O00533 1208 aa18.15■□□□□ 0.5
RNF40-212ENST00000602784 KCNQ3O43525 872 aa18.15■□□□□ 0.5
RNF40-212ENST00000602784 WWC1Q8IX03 1113 aa18.15■□□□□ 0.5
RNF40-212ENST00000602784 LINC00116Q8NCU8 138 aa18.15■□□□□ 0.5
RNF40-212ENST00000602784 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
RNF40-212ENST00000602784 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
RNF40-212ENST00000602784 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.49
RNF40-212ENST00000602784 ZNF827Q17R98 1081 aa18.14■□□□□ 0.49
RNF40-212ENST00000602784 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
RNF40-212ENST00000602784 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
RNF40-212ENST00000602784 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
RNF40-212ENST00000602784 ZNF853P0CG23 659 aa18.13■□□□□ 0.49
RNF40-212ENST00000602784 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
RNF40-212ENST00000602784 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
RNF40-212ENST00000602784 SNRPA1P09661 255 aaKnown RBP18.12■□□□□ 0.49
RNF40-212ENST00000602784 DNAJC10Q8IXB1 793 aa18.12■□□□□ 0.49
RNF40-212ENST00000602784 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
RNF40-212ENST00000602784 TFCP2L1Q9NZI6 479 aa18.12■□□□□ 0.49
RNF40-212ENST00000602784 IL16Q14005 1332 aa18.12■□□□□ 0.49
RNF40-212ENST00000602784 COL5A3P25940 1745 aaPredicted RBP18.12■□□□□ 0.49
RNF40-212ENST00000602784 TJP1Q07157 1748 aa18.12■□□□□ 0.49
RNF40-212ENST00000602784 STARD3NLO95772 234 aa18.11■□□□□ 0.49
RNF40-212ENST00000602784 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
RNF40-212ENST00000602784 EIF4A1P60842 406 aaKnown RBP18.11■□□□□ 0.49
RNF40-212ENST00000602784 GNAI1P63096 354 aa18.11■□□□□ 0.49
RNF40-212ENST00000602784 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
RNF40-212ENST00000602784 AK7Q96M32 723 aa18.11■□□□□ 0.49
RNF40-212ENST00000602784 QSER1Q2KHR3 1735 aa18.1■□□□□ 0.49
RNF40-212ENST00000602784 PSDA5PKW4 1024 aaPredicted RBP18.1■□□□□ 0.49
RNF40-212ENST00000602784 CRKLP46109 303 aaKnown RBP18.1■□□□□ 0.49
RNF40-212ENST00000602784 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
RNF40-212ENST00000602784 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
RNF40-212ENST00000602784 GIGYF1O75420 1035 aaPredicted RBP18.08■□□□□ 0.48
RNF40-212ENST00000602784 RPS6KA4O75676 772 aa18.08■□□□□ 0.48
RNF40-212ENST00000602784 SSFA2P28290 1259 aa18.08■□□□□ 0.48
RNF40-212ENST00000602784 INTS5Q6P9B9 1019 aaKnown RBP18.08■□□□□ 0.48
RNF40-212ENST00000602784 CCDC87Q9NVE4 849 aa18.08■□□□□ 0.48
RNF40-212ENST00000602784 PNPLA7Q6ZV29 1317 aa18.07■□□□□ 0.48
RNF40-212ENST00000602784 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
RNF40-212ENST00000602784 GNPATO15228 680 aa18.07■□□□□ 0.48
RNF40-212ENST00000602784 ADRA2BP18089 450 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms