RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 PIM2Q9P1W9 311 aa16.93■□□□□ 0.3
HCG18-241ENST00000602290 CD163L1Q9NR16 1453 aa16.93■□□□□ 0.3
HCG18-241ENST00000602290 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
HCG18-241ENST00000602290 GNPATO15228 680 aa16.92■□□□□ 0.3
HCG18-241ENST00000602290 VEGFBP49765 207 aa16.92■□□□□ 0.3
HCG18-241ENST00000602290 RASSF7Q02833 373 aa16.92■□□□□ 0.3
HCG18-241ENST00000602290 DALRD3Q5D0E6 543 aaKnown RBP16.92■□□□□ 0.3
HCG18-241ENST00000602290 NME9Q86XW9 330 aa16.92■□□□□ 0.3
HCG18-241ENST00000602290 SMARCC1Q92922 1105 aaPredicted RBP16.92■□□□□ 0.3
HCG18-241ENST00000602290 PASKQ96RG2 1323 aa16.92■□□□□ 0.3
HCG18-241ENST00000602290 ITGB4P16144 1822 aa16.91■□□□□ 0.3
HCG18-241ENST00000602290 ZEB1P37275 1124 aaPredicted RBP16.91■□□□□ 0.3
HCG18-241ENST00000602290 CGNL1Q0VF96 1302 aa16.9■□□□□ 0.3
HCG18-241ENST00000602290 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
HCG18-241ENST00000602290 ITPK1Q13572 414 aa16.89■□□□□ 0.29
HCG18-241ENST00000602290 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
HCG18-241ENST00000602290 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
HCG18-241ENST00000602290 LOC102724428A0A0B4J2F2 783 aa16.88■□□□□ 0.29
HCG18-241ENST00000602290 SIK1P57059 783 aa16.88■□□□□ 0.29
HCG18-241ENST00000602290 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
HCG18-241ENST00000602290 LTV1Q96GA3 475 aaPredicted RBP16.88■□□□□ 0.29
HCG18-241ENST00000602290 LMNB1P20700 586 aa16.87■□□□□ 0.29
HCG18-241ENST00000602290 TMF1P82094 1093 aa16.87■□□□□ 0.29
HCG18-241ENST00000602290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■■□ 21.3
HCG18-241ENST00000602290 PCDH11XQ9BZA7 1347 aa16.87■□□□□ 0.29
HCG18-241ENST00000602290 PCDH11YQ9BZA8 1340 aa16.87■□□□□ 0.29
HCG18-241ENST00000602290 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
HCG18-241ENST00000602290 POTEJP0CG39 1038 aa16.86■□□□□ 0.29
HCG18-241ENST00000602290 GYS1P13807 737 aa16.86■□□□□ 0.29
HCG18-241ENST00000602290 KDRP35968 1356 aa16.86■□□□□ 0.29
HCG18-241ENST00000602290 PIGBQ92521 554 aa16.85■□□□□ 0.29
HCG18-241ENST00000602290 CYP27B1O15528 508 aa16.83■□□□□ 0.28
HCG18-241ENST00000602290 CHRNA5P30532 468 aa16.83■□□□□ 0.28
HCG18-241ENST00000602290 HOXC9P31274 260 aa16.83■□□□□ 0.28
HCG18-241ENST00000602290 PARP3Q9Y6F1 533 aa16.83■□□□□ 0.28
HCG18-241ENST00000602290 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
HCG18-241ENST00000602290 ZNF831Q5JPB2 1677 aa16.82■□□□□ 0.28
HCG18-241ENST00000602290 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
HCG18-241ENST00000602290 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
HCG18-241ENST00000602290 RASSF10A6NK89 507 aa16.82■□□□□ 0.28
HCG18-241ENST00000602290 ADRA2BP18089 450 aa16.81■□□□□ 0.28
HCG18-241ENST00000602290 NBPF6Q5VWK0 638 aa16.81■□□□□ 0.28
HCG18-241ENST00000602290 NBPF4Q96M43 638 aa16.81■□□□□ 0.28
HCG18-241ENST00000602290 DLEC1Q9Y238 1755 aa16.81■□□□□ 0.28
HCG18-241ENST00000602290 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
HCG18-241ENST00000602290 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
HCG18-241ENST00000602290 TMEM88BA6NKF7 163 aa16.8■□□□□ 0.28
HCG18-241ENST00000602290 NFKBIEO00221 500 aa16.8■□□□□ 0.28
HCG18-241ENST00000602290 MAP2K1Q02750 393 aaPredicted RBP16.8■□□□□ 0.28
HCG18-241ENST00000602290 DDR1Q08345 913 aa16.8■□□□□ 0.28
HCG18-241ENST00000602290 PRPF38BQ5VTL8 546 aaKnown RBP16.8■□□□□ 0.28
HCG18-241ENST00000602290 TRAPPC3LQ5T215 181 aa16.79■□□□□ 0.28
HCG18-241ENST00000602290 ARHGEF1Q92888 912 aaKnown RBP16.79■□□□□ 0.28
HCG18-241ENST00000602290 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
HCG18-241ENST00000602290 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
HCG18-241ENST00000602290 USHBP1Q8N6Y0 703 aa16.78■□□□□ 0.28
HCG18-241ENST00000602290 ADAMTSL1Q8N6G6 1762 aa16.78■□□□□ 0.28
HCG18-241ENST00000602290 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
HCG18-241ENST00000602290 ATP6V1AP38606 617 aa16.77■□□□□ 0.28
HCG18-241ENST00000602290 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.28
HCG18-241ENST00000602290 MCOLN1Q9GZU1 580 aa16.77■□□□□ 0.28
HCG18-241ENST00000602290 ITGBL1O95965 494 aaPredicted RBP16.76■□□□□ 0.27
HCG18-241ENST00000602290 NKX1-1Q15270 411 aaPredicted RBP16.76■□□□□ 0.27
HCG18-241ENST00000602290 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
HCG18-241ENST00000602290 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
HCG18-241ENST00000602290 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
HCG18-241ENST00000602290 TATP17735 454 aaPredicted RBP16.75■□□□□ 0.27
HCG18-241ENST00000602290 LDHDQ86WU2 507 aa16.75■□□□□ 0.27
HCG18-241ENST00000602290 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
HCG18-241ENST00000602290 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
HCG18-241ENST00000602290 DPY19L2Q6NUT2 758 aa16.74■□□□□ 0.27
HCG18-241ENST00000602290 SLC4A9Q96Q91 983 aa16.74■□□□□ 0.27
HCG18-241ENST00000602290 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
HCG18-241ENST00000602290 ADAMTS7Q9UKP4 1686 aa16.73■□□□□ 0.27
HCG18-241ENST00000602290 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
HCG18-241ENST00000602290 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
HCG18-241ENST00000602290 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
HCG18-241ENST00000602290 RAB3GAP2Q9H2M9 1393 aa16.73■□□□□ 0.27
HCG18-241ENST00000602290 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
HCG18-241ENST00000602290 DEFB115Q30KQ5 88 aa16.72■□□□□ 0.27
HCG18-241ENST00000602290 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
HCG18-241ENST00000602290 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
HCG18-241ENST00000602290 RPS6KA4O75676 772 aa16.71■□□□□ 0.27
HCG18-241ENST00000602290 RFC4P35249 363 aa16.71■□□□□ 0.27
HCG18-241ENST00000602290 FKBP8Q14318 412 aa16.71■□□□□ 0.27
HCG18-241ENST00000602290 ATG3Q9NT62 314 aa16.71■□□□□ 0.27
HCG18-241ENST00000602290 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
HCG18-241ENST00000602290 AMPHP49418 695 aa16.7■□□□□ 0.26
HCG18-241ENST00000602290 SCN4AP35499 1836 aa16.7■□□□□ 0.26
HCG18-241ENST00000602290 FBLN1P23142 703 aa16.69■□□□□ 0.26
HCG18-241ENST00000602290 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
HCG18-241ENST00000602290 TMOD3Q9NYL9 352 aa16.69■□□□□ 0.26
HCG18-241ENST00000602290 FER1L6Q2WGJ9 1857 aa16.68■□□□□ 0.26
HCG18-241ENST00000602290 DDNO94850 711 aaPredicted RBP16.68■□□□□ 0.26
HCG18-241ENST00000602290 TAF1DQ9H5J8 278 aaPredicted RBP16.68■□□□□ 0.26
HCG18-241ENST00000602290 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
HCG18-241ENST00000602290 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
HCG18-241ENST00000602290 TM4SF1P30408 202 aa16.66■□□□□ 0.26
HCG18-241ENST00000602290 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
HCG18-241ENST00000602290 TSKSQ9UJT2 592 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms