RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 PARP4Q9UKK3 1724 aaKnown RBP29.5■■■□□ 2.31
SHD-204ENST00000599689 NBPF6Q5VWK0 638 aa29.49■■■□□ 2.31
SHD-204ENST00000599689 DEFB132Q7Z7B7 95 aa29.49■■■□□ 2.31
SHD-204ENST00000599689 TSPYL6Q8N831 410 aa29.49■■■□□ 2.31
SHD-204ENST00000599689 NBPF4Q96M43 638 aa29.49■■■□□ 2.31
SHD-204ENST00000599689 NLRP2Q9NX02 1062 aa29.49■■■□□ 2.31
SHD-204ENST00000599689 KIF16BQ96L93 1317 aa29.49■■■□□ 2.31
SHD-204ENST00000599689 DZIP1LQ8IYY4 767 aaKnown RBP29.48■■■□□ 2.31
SHD-204ENST00000599689 CENPQQ7L2Z9 268 aaPredicted RBP29.48■■■□□ 2.31
SHD-204ENST00000599689 NOB1Q9ULX3 412 aaKnown RBP29.48■■■□□ 2.31
SHD-204ENST00000599689 TWISTNBQ3B726 338 aaPredicted RBP29.47■■■□□ 2.31
SHD-204ENST00000599689 USHBP1Q8N6Y0 703 aa29.47■■■□□ 2.31
SHD-204ENST00000599689 CLUAP1Q96AJ1 413 aa29.47■■■□□ 2.31
SHD-204ENST00000599689 DISP2A7MBM2 1401 aa29.46■■■□□ 2.31
SHD-204ENST00000599689 IPO8O15397 1037 aaKnown RBP29.46■■■□□ 2.31
SHD-204ENST00000599689 BAG6P46379 1132 aa29.46■■■□□ 2.31
SHD-204ENST00000599689 ATF7IPQ6VMQ6 1270 aa29.46■■■□□ 2.31
SHD-204ENST00000599689 C8orf58Q8NAV2 365 aa29.46■■■□□ 2.31
SHD-204ENST00000599689 FTSJ3Q8IY81 847 aaKnown RBP29.45■■■□□ 2.31
SHD-204ENST00000599689 LRRC37A3O60309 1634 aa29.45■■■□□ 2.3
SHD-204ENST00000599689 TRIM27P14373 513 aa29.45■■■□□ 2.3
SHD-204ENST00000599689 GNAT3A8MTJ3 354 aa29.44■■■□□ 2.3
SHD-204ENST00000599689 MVPQ14764 893 aaKnown RBP29.44■■■□□ 2.3
SHD-204ENST00000599689 TRIM37O94972 964 aa29.43■■■□□ 2.3
SHD-204ENST00000599689 NCAPD2Q15021 1401 aa29.43■■■□□ 2.3
SHD-204ENST00000599689 MRPL50Q8N5N7 158 aaKnown RBP29.42■■■□□ 2.3
SHD-204ENST00000599689 MAP3K5Q99683 1374 aa29.42■■■□□ 2.3
SHD-204ENST00000599689 ELL2O00472 640 aaPredicted RBP29.42■■■□□ 2.3
SHD-204ENST00000599689 EXOC5O00471 708 aa29.41■■■□□ 2.3
SHD-204ENST00000599689 OVOS2A0A0G2JMS6 1433 aa29.41■■■□□ 2.3
SHD-204ENST00000599689 RBM19Q9Y4C8 960 aaKnown RBP29.4■■■□□ 2.3
SHD-204ENST00000599689 IL2RBP14784 551 aa29.39■■■□□ 2.3
SHD-204ENST00000599689 WNK3Q9BYP7 1800 aa29.38■■■□□ 2.29
SHD-204ENST00000599689 ARHGAP45Q92619 1136 aa29.38■■■□□ 2.29
SHD-204ENST00000599689 MARCH10Q8NA82 808 aaPredicted RBP29.37■■■□□ 2.29
SHD-204ENST00000599689 TCERG1O14776 1098 aaKnown RBP29.37■■■□□ 2.29
SHD-204ENST00000599689 EN1Q05925 392 aaPredicted RBP29.37■■■□□ 2.29
SHD-204ENST00000599689 TSPYL4Q9UJ04 414 aa29.35■■■□□ 2.29
SHD-204ENST00000599689 APBA3O96018 575 aa29.34■■■□□ 2.29
SHD-204ENST00000599689 IL17REQ8NFR9 667 aa29.34■■■□□ 2.29
SHD-204ENST00000599689 DDX19BQ9UMR2 479 aa29.34■■■□□ 2.29
SHD-204ENST00000599689 TNS2Q63HR2 1409 aa29.34■■■□□ 2.29
SHD-204ENST00000599689 BCL9O00512 1426 aa29.34■■■□□ 2.29
SHD-204ENST00000599689 PLEKHO1Q53GL0 409 aaPredicted RBP29.33■■■□□ 2.29
SHD-204ENST00000599689 MIS18AQ9NYP9 233 aa29.33■■■□□ 2.29
SHD-204ENST00000599689 TNS1Q9HBL0 1735 aaKnown RBP29.33■■■□□ 2.29
SHD-204ENST00000599689 IGHDP01880 384 aa29.32■■■□□ 2.28
SHD-204ENST00000599689 KRT24Q2M2I5 525 aa29.32■■■□□ 2.28
SHD-204ENST00000599689 TMEM57Q8N5G2 664 aa29.32■■■□□ 2.28
SHD-204ENST00000599689 BABAM1Q9NWV8 329 aa29.32■■■□□ 2.28
SHD-204ENST00000599689 FAM208AQ9UK61 1670 aaKnown RBP29.32■■■□□ 2.28
SHD-204ENST00000599689 AMOTQ4VCS5 1084 aa29.31■■■□□ 2.28
SHD-204ENST00000599689 ITPRIPQ8IWB1 547 aa29.31■■■□□ 2.28
SHD-204ENST00000599689 CAMKK2Q96RR4 588 aa29.3■■■□□ 2.28
SHD-204ENST00000599689 PCDHB15Q9Y5E8 787 aa29.3■■■□□ 2.28
SHD-204ENST00000599689 CEMIPQ8WUJ3 1361 aa29.28■■■□□ 2.28
SHD-204ENST00000599689 TAF7Q15545 349 aaPredicted RBP29.28■■■□□ 2.28
SHD-204ENST00000599689 EZH2Q15910 746 aaKnown RBP29.28■■■□□ 2.28
SHD-204ENST00000599689 AKAP4Q5JQC9 854 aa29.27■■■□□ 2.28
SHD-204ENST00000599689 ZNF530Q6P9A1 599 aaPredicted RBP29.26■■■□□ 2.27
SHD-204ENST00000599689 API5Q9BZZ5 524 aaKnown RBP29.26■■■□□ 2.27
SHD-204ENST00000599689 BCL11BQ9C0K0 894 aaPredicted RBP29.26■■■□□ 2.27
SHD-204ENST00000599689 VIRMAQ69YN4 1812 aaKnown RBP29.26■■■□□ 2.27
SHD-204ENST00000599689 ABCC4O15439 1325 aa29.24■■■□□ 2.27
SHD-204ENST00000599689 SKAP1Q86WV1 359 aa29.23■■■□□ 2.27
SHD-204ENST00000599689 RWDD1Q9H446 243 aaPredicted RBP29.23■■■□□ 2.27
SHD-204ENST00000599689 ZBTB40Q9NUA8 1239 aa29.22■■■□□ 2.27
SHD-204ENST00000599689 SOS1Q07889 1333 aaPredicted RBP29.21■■■□□ 2.27
SHD-204ENST00000599689 LGR6Q9HBX8 967 aa29.21■■■□□ 2.27
SHD-204ENST00000599689 C1orf141Q5JVX7 400 aa29.2■■■□□ 2.27
SHD-204ENST00000599689 PTF1AQ7RTS3 328 aa29.2■■■□□ 2.27
SHD-204ENST00000599689 CHMP4BQ9H444 224 aaKnown RBP29.2■■■□□ 2.27
SHD-204ENST00000599689 PLSCR1O15162 318 aa29.19■■■□□ 2.26
SHD-204ENST00000599689 KDM3BQ7LBC6 1761 aa29.18■■■□□ 2.26
SHD-204ENST00000599689 RAPGEF4Q8WZA2 1011 aa29.18■■■□□ 2.26
SHD-204ENST00000599689 MEGF6O75095 1541 aa29.18■■■□□ 2.26
SHD-204ENST00000599689 CACNA1FO60840 1977 aa29.17■■■□□ 2.26
SHD-204ENST00000599689 ZCRB1Q8TBF4 217 aaKnown RBP29.17■■■□□ 2.26
SHD-204ENST00000599689 DDX54Q8TDD1 881 aaKnown RBP29.17■■■□□ 2.26
SHD-204ENST00000599689 PTPRCP08575 1304 aa29.17■■■□□ 2.26
SHD-204ENST00000599689 SBF2Q86WG5 1849 aa29.16■■■□□ 2.26
SHD-204ENST00000599689 RNMTO43148 476 aaKnown RBP29.16■■■□□ 2.26
SHD-204ENST00000599689 ZBTB7BO15156 539 aaPredicted RBP29.15■■■□□ 2.26
SHD-204ENST00000599689 MPRIPQ6WCQ1 1025 aa29.15■■■□□ 2.26
SHD-204ENST00000599689 PLEKHG2Q9H7P9 1386 aa29.15■■■□□ 2.26
SHD-204ENST00000599689 KCNQ2O43526 872 aa29.14■■■□□ 2.26
SHD-204ENST00000599689 SLC4A2P04920 1241 aa29.14■■■□□ 2.26
SHD-204ENST00000599689 TATP17735 454 aaPredicted RBP29.14■■■□□ 2.26
SHD-204ENST00000599689 HDAC1Q13547 482 aaPredicted RBP29.14■■■□□ 2.26
SHD-204ENST00000599689 ADAMTS7Q9UKP4 1686 aa29.14■■■□□ 2.26
SHD-204ENST00000599689 ACSBG1Q96GR2 724 aa29.14■■■□□ 2.25
SHD-204ENST00000599689 TEFQ10587 303 aa29.13■■■□□ 2.25
SHD-204ENST00000599689 PSDA5PKW4 1024 aaPredicted RBP29.11■■■□□ 2.25
SHD-204ENST00000599689 CCDC30Q5VVM6 783 aa29.11■■■□□ 2.25
SHD-204ENST00000599689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.11■■■□□ 2.25
SHD-204ENST00000599689 SIPA1L3O60292 1781 aaPredicted RBP29.11■■■□□ 2.25
SHD-204ENST00000599689 PDE4AP27815 886 aa29.11■■■□□ 2.25
SHD-204ENST00000599689 INTS3Q68E01 1043 aaKnown RBP29.11■■■□□ 2.25
SHD-204ENST00000599689 STK31Q9BXU1 1019 aa29.11■■■□□ 2.25
SHD-204ENST00000599689 RGS3P49796 1198 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms