RNA–Protein interactions for RNA: ENST00000599225.1

LTBP4-225, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-225ENST00000599225 AK7Q96M32 723 aa21.96■■□□□ 1.11
LTBP4-225ENST00000599225 SSFA2P28290 1259 aa21.95■■□□□ 1.1
LTBP4-225ENST00000599225 ITPK1Q13572 414 aa21.95■■□□□ 1.1
LTBP4-225ENST00000599225 ATP6V1AP38606 617 aa21.94■■□□□ 1.1
LTBP4-225ENST00000599225 UBR3Q6ZT12 1888 aa21.94■■□□□ 1.1
LTBP4-225ENST00000599225 C1orf141Q5JVX7 400 aa21.93■■□□□ 1.1
LTBP4-225ENST00000599225 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
LTBP4-225ENST00000599225 ZNF831Q5JPB2 1677 aa21.92■■□□□ 1.1
LTBP4-225ENST00000599225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
LTBP4-225ENST00000599225 SLC4A9Q96Q91 983 aa21.92■■□□□ 1.1
LTBP4-225ENST00000599225 CABP4P57796 275 aa21.91■■□□□ 1.1
LTBP4-225ENST00000599225 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
LTBP4-225ENST00000599225 DIAPH1O60610 1272 aaKnown RBP21.89■■□□□ 1.09
LTBP4-225ENST00000599225 AKAP4Q5JQC9 854 aa21.89■■□□□ 1.09
LTBP4-225ENST00000599225 RC3H1Q5TC82 1133 aaKnown RBP21.89■■□□□ 1.09
LTBP4-225ENST00000599225 NFATC2IPQ8NCF5 419 aa21.88■■□□□ 1.09
LTBP4-225ENST00000599225 NLGN2Q8NFZ4 835 aa21.88■■□□□ 1.09
LTBP4-225ENST00000599225 GNPATO15228 680 aa21.87■■□□□ 1.09
LTBP4-225ENST00000599225 PHF14O94880 888 aa21.87■■□□□ 1.09
LTBP4-225ENST00000599225 SMIM5Q71RC9 77 aa21.87■■□□□ 1.09
LTBP4-225ENST00000599225 CD2APQ9Y5K6 639 aa21.87■■□□□ 1.09
LTBP4-225ENST00000599225 KLHL34Q8N239 644 aa21.86■■□□□ 1.09
LTBP4-225ENST00000599225 CNTNAP4Q9C0A0 1308 aa21.85■■□□□ 1.09
LTBP4-225ENST00000599225 COL3A1P02461 1466 aaPredicted RBP21.85■■□□□ 1.09
LTBP4-225ENST00000599225 HMOX1P09601 288 aa21.85■■□□□ 1.09
LTBP4-225ENST00000599225 GPR162Q16538 588 aa21.85■■□□□ 1.09
LTBP4-225ENST00000599225 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
LTBP4-225ENST00000599225 ADRA2BP18089 450 aa21.84■■□□□ 1.09
LTBP4-225ENST00000599225 CHD4Q14839 1912 aa21.84■■□□□ 1.09
LTBP4-225ENST00000599225 SLC52A2Q9HAB3 445 aa21.83■■□□□ 1.09
LTBP4-225ENST00000599225 RTCBQ9Y3I0 505 aaKnown RBP21.83■■□□□ 1.09
LTBP4-225ENST00000599225 SCN11AQ9UI33 1791 aa21.83■■□□□ 1.09
LTBP4-225ENST00000599225 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
LTBP4-225ENST00000599225 LGR6Q9HBX8 967 aa21.82■■□□□ 1.08
LTBP4-225ENST00000599225 COL5A3P25940 1745 aaPredicted RBP21.81■■□□□ 1.08
LTBP4-225ENST00000599225 RNMTO43148 476 aaKnown RBP21.81■■□□□ 1.08
LTBP4-225ENST00000599225 RPS6KA4O75676 772 aa21.81■■□□□ 1.08
LTBP4-225ENST00000599225 TRAPPC3LQ5T215 181 aa21.81■■□□□ 1.08
LTBP4-225ENST00000599225 MRC1P22897 1456 aa21.81■■□□□ 1.08
LTBP4-225ENST00000599225 PTCD1O75127 700 aaKnown RBP21.8■■□□□ 1.08
LTBP4-225ENST00000599225 MYH14Q7Z406 1995 aaKnown RBP21.79■■□□□ 1.08
LTBP4-225ENST00000599225 ZNF784Q8NCA9 323 aaPredicted RBP21.79■■□□□ 1.08
LTBP4-225ENST00000599225 ARHGEF1Q92888 912 aaKnown RBP21.79■■□□□ 1.08
LTBP4-225ENST00000599225 CICQ96RK0 1608 aaPredicted RBP21.79■■□□□ 1.08
LTBP4-225ENST00000599225 ADAMTS7Q9UKP4 1686 aa21.79■■□□□ 1.08
LTBP4-225ENST00000599225 GRIN3BO60391 1043 aa21.78■■□□□ 1.08
LTBP4-225ENST00000599225 YBX3P16989 372 aaKnown RBP eCLIP21.78■■□□□ 1.084e-6■■■□□ 15.1
LTBP4-225ENST00000599225 NLGN1Q8N2Q7 840 aa21.77■■□□□ 1.08
LTBP4-225ENST00000599225 CRKLP46109 303 aaKnown RBP21.76■■□□□ 1.07
LTBP4-225ENST00000599225 MMP10P09238 476 aa21.75■■□□□ 1.07
LTBP4-225ENST00000599225 U2SURPO15042 1029 aaKnown RBP21.74■■□□□ 1.07
LTBP4-225ENST00000599225 GYS1P13807 737 aa21.74■■□□□ 1.07
LTBP4-225ENST00000599225 CNGB1Q14028 1251 aaPredicted RBP21.74■■□□□ 1.07
LTBP4-225ENST00000599225 PELP1Q8IZL8 1130 aaKnown RBP21.74■■□□□ 1.07
LTBP4-225ENST00000599225 RFC4P35249 363 aa21.73■■□□□ 1.07
LTBP4-225ENST00000599225 INTS5Q6P9B9 1019 aaKnown RBP21.73■■□□□ 1.07
LTBP4-225ENST00000599225 GAS2L2Q8NHY3 880 aa21.73■■□□□ 1.07
LTBP4-225ENST00000599225 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
LTBP4-225ENST00000599225 PPP2R1AP30153 589 aa21.72■■□□□ 1.07
LTBP4-225ENST00000599225 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
LTBP4-225ENST00000599225 TJP1Q07157 1748 aa21.72■■□□□ 1.07
LTBP4-225ENST00000599225 SLC39A6Q13433 755 aa21.71■■□□□ 1.07
LTBP4-225ENST00000599225 KCPQ6ZWJ8 1503 aa21.7■■□□□ 1.07
LTBP4-225ENST00000599225 GNAT3A8MTJ3 354 aa21.7■■□□□ 1.06
LTBP4-225ENST00000599225 DNAJC10Q8IXB1 793 aa21.7■■□□□ 1.06
LTBP4-225ENST00000599225 IL17REQ8NFR9 667 aa21.7■■□□□ 1.06
LTBP4-225ENST00000599225 RSPH6AQ9H0K4 717 aa21.7■■□□□ 1.06
LTBP4-225ENST00000599225 VIRMAQ69YN4 1812 aaKnown RBP21.69■■□□□ 1.06
LTBP4-225ENST00000599225 CYP19A1P11511 503 aaPredicted RBP21.69■■□□□ 1.06
LTBP4-225ENST00000599225 CCDC87Q9NVE4 849 aa21.69■■□□□ 1.06
LTBP4-225ENST00000599225 USP42Q9H9J4 1324 aaKnown RBP21.69■■□□□ 1.06
LTBP4-225ENST00000599225 PHACTR3Q96KR7 559 aa21.68■■□□□ 1.06
LTBP4-225ENST00000599225 NUDCQ9Y266 331 aa21.68■■□□□ 1.06
LTBP4-225ENST00000599225 CEMIPQ8WUJ3 1361 aa21.68■■□□□ 1.06
LTBP4-225ENST00000599225 C4AP0C0L4 1744 aa21.68■■□□□ 1.06
LTBP4-225ENST00000599225 KIF13BQ9NQT8 1826 aa21.68■■□□□ 1.06
LTBP4-225ENST00000599225 TGFB2P61812 414 aa21.67■■□□□ 1.06
LTBP4-225ENST00000599225 C10orf71Q711Q0 1435 aa21.66■■□□□ 1.06
LTBP4-225ENST00000599225 SOS1Q07889 1333 aaPredicted RBP21.66■■□□□ 1.06
LTBP4-225ENST00000599225 PRKAR2BP31323 418 aa21.66■■□□□ 1.06
LTBP4-225ENST00000599225 FCHSD2O94868 740 aa21.65■■□□□ 1.06
LTBP4-225ENST00000599225 SRP68Q9UHB9 627 aaKnown RBP21.65■■□□□ 1.06
LTBP4-225ENST00000599225 UBR2Q8IWV8 1755 aa21.65■■□□□ 1.06
LTBP4-225ENST00000599225 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.06
LTBP4-225ENST00000599225 TEFQ10587 303 aa21.64■■□□□ 1.05
LTBP4-225ENST00000599225 FKBP8Q14318 412 aa21.64■■□□□ 1.05
LTBP4-225ENST00000599225 ZNF790Q6PG37 636 aa21.64■■□□□ 1.05
LTBP4-225ENST00000599225 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
LTBP4-225ENST00000599225 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
LTBP4-225ENST00000599225 TM4SF1P30408 202 aa21.62■■□□□ 1.05
LTBP4-225ENST00000599225 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
LTBP4-225ENST00000599225 TTC5Q8N0Z6 440 aa21.62■■□□□ 1.05
LTBP4-225ENST00000599225 ZNF496Q96IT1 587 aaPredicted RBP21.61■■□□□ 1.05
LTBP4-225ENST00000599225 NARFQ9UHQ1 456 aa21.61■■□□□ 1.05
LTBP4-225ENST00000599225 ZBTB1Q9Y2K1 713 aa21.61■■□□□ 1.05
LTBP4-225ENST00000599225 SIPA1L3O60292 1781 aaPredicted RBP21.61■■□□□ 1.05
LTBP4-225ENST00000599225 KIAA1551Q9HCM1 1747 aa21.6■■□□□ 1.05
LTBP4-225ENST00000599225 ZPR1O75312 459 aa21.6■■□□□ 1.05
LTBP4-225ENST00000599225 STARD3NLO95772 234 aa21.6■■□□□ 1.05
LTBP4-225ENST00000599225 DDR1Q08345 913 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms