RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 BTBD11A6QL63 1104 aa25.08■■□□□ 1.61
LTBP4-223ENST00000598717 ZNF853P0CG23 659 aa25.08■■□□□ 1.61
LTBP4-223ENST00000598717 ACSBG1Q96GR2 724 aa25.08■■□□□ 1.61
LTBP4-223ENST00000598717 TSPYL4Q9UJ04 414 aa25.08■■□□□ 1.61
LTBP4-223ENST00000598717 CHL1O00533 1208 aa25.07■■□□□ 1.6
LTBP4-223ENST00000598717 PRIM1P49642 420 aaKnown RBP25.07■■□□□ 1.6
LTBP4-223ENST00000598717 FAM196AQ6ZSG2 479 aa25.07■■□□□ 1.6
LTBP4-223ENST00000598717 MIS18AQ9NYP9 233 aa25.07■■□□□ 1.6
LTBP4-223ENST00000598717 MBIPQ9NS73 344 aa25.06■■□□□ 1.6
LTBP4-223ENST00000598717 VIRMAQ69YN4 1812 aaKnown RBP25.06■■□□□ 1.6
LTBP4-223ENST00000598717 MRC1P22897 1456 aa25.06■■□□□ 1.6
LTBP4-223ENST00000598717 BRWD3Q6RI45 1802 aa25.05■■□□□ 1.6
LTBP4-223ENST00000598717 BCL9O00512 1426 aa25.05■■□□□ 1.6
LTBP4-223ENST00000598717 TSR2Q969E8 191 aaKnown RBP25.05■■□□□ 1.6
LTBP4-223ENST00000598717 FANCIQ9NVI1 1328 aa25.04■■□□□ 1.6
LTBP4-223ENST00000598717 TOGARAM1Q9Y4F4 1720 aa25.03■■□□□ 1.6
LTBP4-223ENST00000598717 TRMT2AQ8IZ69 625 aaKnown RBP25.03■■□□□ 1.6
LTBP4-223ENST00000598717 DUSP27Q5VZP5 1158 aa25.02■■□□□ 1.6
LTBP4-223ENST00000598717 PIGBQ92521 554 aa25.02■■□□□ 1.6
LTBP4-223ENST00000598717 DOT1LQ8TEK3 1739 aa25.02■■□□□ 1.6
LTBP4-223ENST00000598717 TTC5Q8N0Z6 440 aa25.01■■□□□ 1.59
LTBP4-223ENST00000598717 KCNQ2O43526 872 aa24.99■■□□□ 1.59
LTBP4-223ENST00000598717 SIPA1L3O60292 1781 aaPredicted RBP24.99■■□□□ 1.59
LTBP4-223ENST00000598717 SLC39A6Q13433 755 aa24.99■■□□□ 1.59
LTBP4-223ENST00000598717 ZNF790Q6PG37 636 aa24.99■■□□□ 1.59
LTBP4-223ENST00000598717 KAT6BQ8WYB5 2073 aa24.98■■□□□ 1.59
LTBP4-223ENST00000598717 ITGB4P16144 1822 aa24.97■■□□□ 1.59
LTBP4-223ENST00000598717 KCNQ3O43525 872 aa24.96■■□□□ 1.59
LTBP4-223ENST00000598717 CENPBP07199 599 aaPredicted RBP24.96■■□□□ 1.59
LTBP4-223ENST00000598717 EXOSC9Q06265 439 aaKnown RBP24.96■■□□□ 1.59
LTBP4-223ENST00000598717 BCL11BQ9C0K0 894 aaPredicted RBP24.95■■□□□ 1.58
LTBP4-223ENST00000598717 ATG3Q9NT62 314 aa24.95■■□□□ 1.58
LTBP4-223ENST00000598717 ASAP1Q9ULH1 1129 aa24.95■■□□□ 1.58
LTBP4-223ENST00000598717 EIF4A1P60842 406 aaKnown RBP24.94■■□□□ 1.58
LTBP4-223ENST00000598717 TRIM37O94972 964 aa24.93■■□□□ 1.58
LTBP4-223ENST00000598717 SMARCC1Q92922 1105 aaPredicted RBP24.93■■□□□ 1.58
LTBP4-223ENST00000598717 FMNL2Q96PY5 1086 aa24.93■■□□□ 1.58
LTBP4-223ENST00000598717 NHSQ6T4R5 1651 aa24.93■■□□□ 1.58
LTBP4-223ENST00000598717 KDM3BQ7LBC6 1761 aa24.93■■□□□ 1.58
LTBP4-223ENST00000598717 ELL2O00472 640 aaPredicted RBP24.91■■□□□ 1.58
LTBP4-223ENST00000598717 PTCD1O75127 700 aaKnown RBP24.91■■□□□ 1.58
LTBP4-223ENST00000598717 PTF1AQ7RTS3 328 aa24.91■■□□□ 1.58
LTBP4-223ENST00000598717 C8orf58Q8NAV2 365 aa24.91■■□□□ 1.58
LTBP4-223ENST00000598717 ZNF496Q96IT1 587 aaPredicted RBP24.91■■□□□ 1.58
LTBP4-223ENST00000598717 KRT24Q2M2I5 525 aa24.9■■□□□ 1.58
LTBP4-223ENST00000598717 TWISTNBQ3B726 338 aaPredicted RBP24.9■■□□□ 1.58
LTBP4-223ENST00000598717 RBM42Q9BTD8 480 aaKnown RBP24.9■■□□□ 1.58
LTBP4-223ENST00000598717 SBF2Q86WG5 1849 aa24.89■■□□□ 1.58
LTBP4-223ENST00000598717 CT47B1P0C2W7 299 aaPredicted RBP24.89■■□□□ 1.58
LTBP4-223ENST00000598717 PAPPAQ13219 1627 aa24.88■■□□□ 1.57
LTBP4-223ENST00000598717 TSPYL6Q8N831 410 aa24.88■■□□□ 1.57
LTBP4-223ENST00000598717 PALLDQ8WX93 1383 aa24.87■■□□□ 1.57
LTBP4-223ENST00000598717 SOS1Q07889 1333 aaPredicted RBP24.86■■□□□ 1.57
LTBP4-223ENST00000598717 HEG1Q9ULI3 1381 aa24.86■■□□□ 1.57
LTBP4-223ENST00000598717 GIGYF1O75420 1035 aaPredicted RBP24.86■■□□□ 1.57
LTBP4-223ENST00000598717 HOXB7P09629 217 aa24.86■■□□□ 1.57
LTBP4-223ENST00000598717 SNRPA1P09661 255 aaKnown RBP24.86■■□□□ 1.57
LTBP4-223ENST00000598717 VAMP4O75379 141 aa24.85■■□□□ 1.57
LTBP4-223ENST00000598717 VSIG10Q8N0Z9 540 aa24.85■■□□□ 1.57
LTBP4-223ENST00000598717 CHMP4AQ9BY43 222 aa24.85■■□□□ 1.57
LTBP4-223ENST00000598717 KCPQ6ZWJ8 1503 aa24.85■■□□□ 1.57
LTBP4-223ENST00000598717 BTAF1O14981 1849 aa24.84■■□□□ 1.57
LTBP4-223ENST00000598717 ZNF428Q96B54 188 aa24.83■■□□□ 1.57
LTBP4-223ENST00000598717 UBR2Q8IWV8 1755 aa24.82■■□□□ 1.56
LTBP4-223ENST00000598717 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
LTBP4-223ENST00000598717 APBA3O96018 575 aa24.82■■□□□ 1.56
LTBP4-223ENST00000598717 SIK1P57059 783 aa24.82■■□□□ 1.56
LTBP4-223ENST00000598717 TEX13AQ9BXU3 409 aaPredicted RBP24.82■■□□□ 1.56
LTBP4-223ENST00000598717 EIF2S2P20042 333 aaKnown RBP24.81■■□□□ 1.56
LTBP4-223ENST00000598717 ATP6V1AP38606 617 aa24.81■■□□□ 1.56
LTBP4-223ENST00000598717 HDGFL1Q5TGJ6 251 aa24.81■■□□□ 1.56
LTBP4-223ENST00000598717 PRAMEF22A3QJZ6 481 aa24.8■■□□□ 1.56
LTBP4-223ENST00000598717 SF3B2Q13435 895 aaKnown RBP24.8■■□□□ 1.56
LTBP4-223ENST00000598717 RCAN3Q9UKA8 241 aa24.8■■□□□ 1.56
LTBP4-223ENST00000598717 CCDC30Q5VVM6 783 aa24.79■■□□□ 1.56
LTBP4-223ENST00000598717 DNAJC10Q8IXB1 793 aa24.78■■□□□ 1.56
LTBP4-223ENST00000598717 NECTIN2Q92692 538 aa24.78■■□□□ 1.56
LTBP4-223ENST00000598717 SLC4A9Q96Q91 983 aa24.78■■□□□ 1.56
LTBP4-223ENST00000598717 USP16Q9Y5T5 823 aa24.78■■□□□ 1.56
LTBP4-223ENST00000598717 STARD3NLO95772 234 aa24.77■■□□□ 1.56
LTBP4-223ENST00000598717 ALDH1L2Q3SY69 923 aa24.77■■□□□ 1.56
LTBP4-223ENST00000598717 STK31Q9BXU1 1019 aa24.77■■□□□ 1.56
LTBP4-223ENST00000598717 CCNL1Q9UK58 526 aaPredicted RBP24.77■■□□□ 1.56
LTBP4-223ENST00000598717 PLSCR1O15162 318 aa24.76■■□□□ 1.55
LTBP4-223ENST00000598717 RARSP54136 660 aaKnown RBP24.76■■□□□ 1.55
LTBP4-223ENST00000598717 SMC4Q9NTJ3 1288 aa24.75■■□□□ 1.55
LTBP4-223ENST00000598717 TCERG1O14776 1098 aaKnown RBP24.74■■□□□ 1.55
LTBP4-223ENST00000598717 SSH1Q8WYL5 1049 aa24.74■■□□□ 1.55
LTBP4-223ENST00000598717 SLC27A3Q5K4L6 730 aa24.73■■□□□ 1.55
LTBP4-223ENST00000598717 CCDC125Q86Z20 511 aa24.73■■□□□ 1.55
LTBP4-223ENST00000598717 BCL2L13Q9BXK5 485 aa24.73■■□□□ 1.55
LTBP4-223ENST00000598717 C5P01031 1676 aa24.72■■□□□ 1.55
LTBP4-223ENST00000598717 HMGB2P26583 209 aaKnown RBP24.72■■□□□ 1.55
LTBP4-223ENST00000598717 ITPK1Q13572 414 aa24.72■■□□□ 1.55
LTBP4-223ENST00000598717 DBF4Q9UBU7 674 aaPredicted RBP24.72■■□□□ 1.55
LTBP4-223ENST00000598717 SLC4A2P04920 1241 aa24.71■■□□□ 1.55
LTBP4-223ENST00000598717 CYP19A1P11511 503 aaPredicted RBP24.71■■□□□ 1.55
LTBP4-223ENST00000598717 BAG6P46379 1132 aa24.71■■□□□ 1.55
LTBP4-223ENST00000598717 KCNQ4P56696 695 aa24.71■■□□□ 1.55
LTBP4-223ENST00000598717 CHPF2Q9P2E5 772 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms