RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.64e-10■■■■■ 32.8
IRF3-219ENST00000597636 NOLC1Q14978 699 aaKnown RBP eCLIP18.82■□□□□ 0.6
IRF3-219ENST00000597636 GADD45BO75293 160 aaPredicted RBP18.82■□□□□ 0.6
IRF3-219ENST00000597636 HAP1P54257 671 aaPredicted RBP18.82■□□□□ 0.6
IRF3-219ENST00000597636 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
IRF3-219ENST00000597636 EID1Q9Y6B2 187 aa18.81■□□□□ 0.6
IRF3-219ENST00000597636 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
IRF3-219ENST00000597636 HMMRO75330 724 aa18.81■□□□□ 0.6
IRF3-219ENST00000597636 KRT24Q2M2I5 525 aa18.81■□□□□ 0.6
IRF3-219ENST00000597636 UTP14CQ5TAP6 766 aaKnown RBP18.81■□□□□ 0.6
IRF3-219ENST00000597636 ZNF830Q96NB3 372 aaPredicted RBP18.81■□□□□ 0.6
IRF3-219ENST00000597636 ESYT1Q9BSJ8 1104 aa18.81■□□□□ 0.6
IRF3-219ENST00000597636 MCCP23508 829 aa18.8■□□□□ 0.6
IRF3-219ENST00000597636 ANAPC15P60006 121 aa18.8■□□□□ 0.6
IRF3-219ENST00000597636 ZNF710Q8N1W2 664 aa18.8■□□□□ 0.6
IRF3-219ENST00000597636 FER1L4A9Z1Z3 1794 aa18.8■□□□□ 0.6
IRF3-219ENST00000597636 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
IRF3-219ENST00000597636 USP48Q86UV5 1035 aa18.8■□□□□ 0.6
IRF3-219ENST00000597636 JARID2Q92833 1246 aaPredicted RBP18.8■□□□□ 0.6
IRF3-219ENST00000597636 GDPD2Q9HCC8 539 aa18.8■□□□□ 0.6
IRF3-219ENST00000597636 PALD1Q9ULE6 856 aa18.8■□□□□ 0.6
IRF3-219ENST00000597636 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
IRF3-219ENST00000597636 DMTNQ08495 405 aa18.79■□□□□ 0.6
IRF3-219ENST00000597636 MPNDQ8N594 471 aa18.79■□□□□ 0.6
IRF3-219ENST00000597636 USP25Q9UHP3 1055 aa18.79■□□□□ 0.6
IRF3-219ENST00000597636 PTPRCP08575 1304 aa18.79■□□□□ 0.6
IRF3-219ENST00000597636 C3P01024 1663 aa18.79■□□□□ 0.6
IRF3-219ENST00000597636 ZSCAN20P17040 1043 aaPredicted RBP18.79■□□□□ 0.6
IRF3-219ENST00000597636 TSC1Q92574 1164 aa18.79■□□□□ 0.6
IRF3-219ENST00000597636 MAP2P11137 1827 aaKnown RBP18.78■□□□□ 0.6
IRF3-219ENST00000597636 FOXD4L6Q3SYB3 417 aaPredicted RBP18.78■□□□□ 0.6
IRF3-219ENST00000597636 FOXD4L3Q6VB84 417 aaPredicted RBP18.78■□□□□ 0.6
IRF3-219ENST00000597636 NOL8Q76FK4 1167 aaKnown RBP18.78■□□□□ 0.6
IRF3-219ENST00000597636 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
IRF3-219ENST00000597636 ADCY5O95622 1261 aa18.77■□□□□ 0.6
IRF3-219ENST00000597636 THEMISQ8N1K5 641 aaPredicted RBP18.77■□□□□ 0.6
IRF3-219ENST00000597636 WDR33Q9C0J8 1336 aaKnown RBP18.77■□□□□ 0.6
IRF3-219ENST00000597636 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
IRF3-219ENST00000597636 SPTLC3Q9NUV7 552 aa18.77■□□□□ 0.6
IRF3-219ENST00000597636 DLG5Q8TDM6 1919 aa18.76■□□□□ 0.59
IRF3-219ENST00000597636 ATP7BP35670 1465 aa18.76■□□□□ 0.59
IRF3-219ENST00000597636 CCDC183Q5T5S1 534 aa18.76■□□□□ 0.59
IRF3-219ENST00000597636 IL17RAQ96F46 866 aa18.76■□□□□ 0.59
IRF3-219ENST00000597636 CHL1O00533 1208 aa18.75■□□□□ 0.59
IRF3-219ENST00000597636 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
IRF3-219ENST00000597636 TMEM87AQ8NBN3 555 aa18.75■□□□□ 0.59
IRF3-219ENST00000597636 ANO2Q9NQ90 1003 aa18.75■□□□□ 0.59
IRF3-219ENST00000597636 ZHX1Q9UKY1 873 aaPredicted RBP18.75■□□□□ 0.59
IRF3-219ENST00000597636 KIF3AQ9Y496 699 aa18.75■□□□□ 0.59
IRF3-219ENST00000597636 SALL3Q9BXA9 1300 aa18.75■□□□□ 0.59
IRF3-219ENST00000597636 C17orf53Q8N3J3 647 aaPredicted RBP18.75■□□□□ 0.59
IRF3-219ENST00000597636 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
IRF3-219ENST00000597636 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
IRF3-219ENST00000597636 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
IRF3-219ENST00000597636 LETM1O95202 739 aaPredicted RBP18.74■□□□□ 0.59
IRF3-219ENST00000597636 CHMLP26374 656 aa18.74■□□□□ 0.59
IRF3-219ENST00000597636 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
IRF3-219ENST00000597636 MX1P20591 662 aa18.73■□□□□ 0.59
IRF3-219ENST00000597636 NME9Q86XW9 330 aa18.73■□□□□ 0.59
IRF3-219ENST00000597636 UPF3BQ9BZI7 483 aaKnown RBP18.73■□□□□ 0.59
IRF3-219ENST00000597636 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
IRF3-219ENST00000597636 SSH2Q76I76 1423 aa18.72■□□□□ 0.59
IRF3-219ENST00000597636 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
IRF3-219ENST00000597636 KDM4AO75164 1064 aa18.72■□□□□ 0.59
IRF3-219ENST00000597636 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
IRF3-219ENST00000597636 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
IRF3-219ENST00000597636 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
IRF3-219ENST00000597636 UBR1Q8IWV7 1749 aa18.72■□□□□ 0.59
IRF3-219ENST00000597636 CBX1P83916 185 aa18.71■□□□□ 0.59
IRF3-219ENST00000597636 AMOTL2Q9Y2J4 779 aa18.71■□□□□ 0.59
IRF3-219ENST00000597636 PPP4R3BQ5MIZ7 849 aa18.71■□□□□ 0.59
IRF3-219ENST00000597636 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
IRF3-219ENST00000597636 RRS1Q15050 365 aaKnown RBP18.71■□□□□ 0.59
IRF3-219ENST00000597636 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.58
IRF3-219ENST00000597636 RPAP1Q9BWH6 1393 aaPredicted RBP18.7■□□□□ 0.58
IRF3-219ENST00000597636 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
IRF3-219ENST00000597636 GTPBP4Q9BZE4 634 aaKnown RBP18.7■□□□□ 0.58
IRF3-219ENST00000597636 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
IRF3-219ENST00000597636 BCL2L12Q9HB09 334 aa18.7■□□□□ 0.58
IRF3-219ENST00000597636 FAM177BA6PVY3 158 aa18.7■□□□□ 0.58
IRF3-219ENST00000597636 TRIM6-TRIM34B2RNG4 842 aa18.7■□□□□ 0.58
IRF3-219ENST00000597636 CNPY2Q9Y2B0 182 aa18.7■□□□□ 0.58
IRF3-219ENST00000597636 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
IRF3-219ENST00000597636 UBE2HP62256 183 aa18.69■□□□□ 0.58
IRF3-219ENST00000597636 ATP2B3Q16720 1220 aa18.69■□□□□ 0.58
IRF3-219ENST00000597636 SLC4A10Q6U841 1118 aa18.69■□□□□ 0.58
IRF3-219ENST00000597636 GNAI2P04899 355 aa18.68■□□□□ 0.58
IRF3-219ENST00000597636 ROBO2Q9HCK4 1378 aa18.68■□□□□ 0.58
IRF3-219ENST00000597636 MCM10Q7L590 875 aa18.68■□□□□ 0.58
IRF3-219ENST00000597636 KIAA1524Q8TCG1 905 aa18.68■□□□□ 0.58
IRF3-219ENST00000597636 COG3Q96JB2 828 aa18.68■□□□□ 0.58
IRF3-219ENST00000597636 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
IRF3-219ENST00000597636 ZSCAN22P10073 491 aaPredicted RBP18.67■□□□□ 0.58
IRF3-219ENST00000597636 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
IRF3-219ENST00000597636 F6X3S4 739 aa18.67■□□□□ 0.58
IRF3-219ENST00000597636 EPB41L2O43491 1005 aaKnown RBP18.67■□□□□ 0.58
IRF3-219ENST00000597636 AEBP1Q8IUX7 1158 aa18.67■□□□□ 0.58
IRF3-219ENST00000597636 DIAPH3Q9NSV4 1193 aa18.67■□□□□ 0.58
IRF3-219ENST00000597636 STAP2Q9UGK3 403 aa18.67■□□□□ 0.58
IRF3-219ENST00000597636 FUCA2Q9BTY2 467 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms