RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 PPP1R1BQ9UD71 204 aaPredicted RBP30.04■■■□□ 2.4
GTF2F1-204ENST00000594965 ITPK1Q13572 414 aa30.01■■■□□ 2.39
GTF2F1-204ENST00000594965 COL23A1Q86Y22 540 aaPredicted RBP30.01■■■□□ 2.39
GTF2F1-204ENST00000594965 LINC00116Q8NCU8 138 aa30.01■■■□□ 2.39
GTF2F1-204ENST00000594965 SLC16A10Q8TF71 515 aa30.01■■■□□ 2.39
GTF2F1-204ENST00000594965 LGR6Q9HBX8 967 aa30.01■■■□□ 2.39
GTF2F1-204ENST00000594965 COL5A3P25940 1745 aaPredicted RBP30.01■■■□□ 2.39
GTF2F1-204ENST00000594965 NFATC2IPQ8NCF5 419 aa30■■■□□ 2.39
GTF2F1-204ENST00000594965 SLC4A9Q96Q91 983 aa30■■■□□ 2.39
GTF2F1-204ENST00000594965 HMGB2P26583 209 aaKnown RBP29.99■■■□□ 2.39
GTF2F1-204ENST00000594965 ATP6V1AP38606 617 aa29.99■■■□□ 2.39
GTF2F1-204ENST00000594965 MRC1P22897 1456 aa29.99■■■□□ 2.39
GTF2F1-204ENST00000594965 AMIGO3Q86WK7 504 aa29.98■■■□□ 2.39
GTF2F1-204ENST00000594965 RNMTO43148 476 aaKnown RBP29.97■■■□□ 2.39
GTF2F1-204ENST00000594965 RSPH6AQ9H0K4 717 aa29.97■■■□□ 2.39
GTF2F1-204ENST00000594965 DDX10Q13206 875 aaKnown RBP29.96■■■□□ 2.39
GTF2F1-204ENST00000594965 AK7Q96M32 723 aa29.94■■■□□ 2.38
GTF2F1-204ENST00000594965 RBM42Q9BTD8 480 aaKnown RBP29.94■■■□□ 2.38
GTF2F1-204ENST00000594965 SLC52A2Q9HAB3 445 aa29.94■■■□□ 2.38
GTF2F1-204ENST00000594965 NUDCQ9Y266 331 aa29.94■■■□□ 2.38
GTF2F1-204ENST00000594965 MYH14Q7Z406 1995 aaKnown RBP29.94■■■□□ 2.38
GTF2F1-204ENST00000594965 TJP1Q07157 1748 aa29.93■■■□□ 2.38
GTF2F1-204ENST00000594965 CICQ96RK0 1608 aaPredicted RBP29.93■■■□□ 2.38
GTF2F1-204ENST00000594965 SMIM5Q71RC9 77 aa29.93■■■□□ 2.38
GTF2F1-204ENST00000594965 PHACTR3Q96KR7 559 aa29.93■■■□□ 2.38
GTF2F1-204ENST00000594965 SIPA1L3O60292 1781 aaPredicted RBP29.92■■■□□ 2.38
GTF2F1-204ENST00000594965 PRKAR2BP31323 418 aa29.92■■■□□ 2.38
GTF2F1-204ENST00000594965 MSH5O43196 834 aa29.9■■■□□ 2.38
GTF2F1-204ENST00000594965 U2AF1L5P0DN76 240 aaPredicted RBP29.9■■■□□ 2.38
GTF2F1-204ENST00000594965 U2AF1Q01081 240 aaKnown RBP eCLIP29.9■■■□□ 2.38
GTF2F1-204ENST00000594965 FLAD1Q8NFF5 587 aa29.9■■■□□ 2.38
GTF2F1-204ENST00000594965 GAS2L2Q8NHY3 880 aa29.9■■■□□ 2.38
GTF2F1-204ENST00000594965 ARXQ96QS3 562 aa29.9■■■□□ 2.38
GTF2F1-204ENST00000594965 FHDC1Q9C0D6 1143 aaPredicted RBP29.89■■■□□ 2.38
GTF2F1-204ENST00000594965 MAP3K5Q99683 1374 aa29.89■■■□□ 2.37
GTF2F1-204ENST00000594965 UBR2Q8IWV8 1755 aa29.87■■■□□ 2.37
GTF2F1-204ENST00000594965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.87■■■□□ 2.37
GTF2F1-204ENST00000594965 PTCD1O75127 700 aaKnown RBP29.87■■■□□ 2.37
GTF2F1-204ENST00000594965 ZEB1P37275 1124 aaPredicted RBP29.87■■■□□ 2.37
GTF2F1-204ENST00000594965 GNAT3A8MTJ3 354 aa29.86■■■□□ 2.37
GTF2F1-204ENST00000594965 GNPATO15228 680 aa29.86■■■□□ 2.37
GTF2F1-204ENST00000594965 FCHSD2O94868 740 aa29.86■■■□□ 2.37
GTF2F1-204ENST00000594965 PHF14O94880 888 aa29.86■■■□□ 2.37
GTF2F1-204ENST00000594965 SSFA2P28290 1259 aa29.86■■■□□ 2.37
GTF2F1-204ENST00000594965 IL17REQ8NFR9 667 aa29.86■■■□□ 2.37
GTF2F1-204ENST00000594965 SYT17Q9BSW7 474 aa29.86■■■□□ 2.37
GTF2F1-204ENST00000594965 RALBP1Q15311 655 aa29.85■■■□□ 2.37
GTF2F1-204ENST00000594965 KCPQ6ZWJ8 1503 aa29.85■■■□□ 2.37
GTF2F1-204ENST00000594965 POLD1P28340 1107 aa29.84■■■□□ 2.37
GTF2F1-204ENST00000594965 SLC39A6Q13433 755 aa29.84■■■□□ 2.37
GTF2F1-204ENST00000594965 MSL1Q68DK7 614 aa29.84■■■□□ 2.37
GTF2F1-204ENST00000594965 CNTNAP4Q9C0A0 1308 aa29.83■■■□□ 2.37
GTF2F1-204ENST00000594965 RC3H1Q5TC82 1133 aaKnown RBP29.83■■■□□ 2.37
GTF2F1-204ENST00000594965 DLG5Q8TDM6 1919 aa29.83■■■□□ 2.37
GTF2F1-204ENST00000594965 C4AP0C0L4 1744 aa29.82■■■□□ 2.36
GTF2F1-204ENST00000594965 CEMIPQ8WUJ3 1361 aa29.8■■■□□ 2.36
GTF2F1-204ENST00000594965 RTCBQ9Y3I0 505 aaKnown RBP29.78■■■□□ 2.36
GTF2F1-204ENST00000594965 RPS6KA4O75676 772 aa29.76■■■□□ 2.35
GTF2F1-204ENST00000594965 DNAJC10Q8IXB1 793 aa29.76■■■□□ 2.35
GTF2F1-204ENST00000594965 CRKLP46109 303 aaKnown RBP29.75■■■□□ 2.35
GTF2F1-204ENST00000594965 TRAPPC3LQ5T215 181 aa29.75■■■□□ 2.35
GTF2F1-204ENST00000594965 TEFQ10587 303 aa29.74■■■□□ 2.35
GTF2F1-204ENST00000594965 PLEKHF1Q96S99 279 aa29.74■■■□□ 2.35
GTF2F1-204ENST00000594965 ARHGEF1Q92888 912 aaKnown RBP29.73■■■□□ 2.35
GTF2F1-204ENST00000594965 MYBBP1AQ9BQG0 1328 aaKnown RBP29.72■■■□□ 2.35
GTF2F1-204ENST00000594965 ADRA2BP18089 450 aa29.72■■■□□ 2.35
GTF2F1-204ENST00000594965 INTS5Q6P9B9 1019 aaKnown RBP29.72■■■□□ 2.35
GTF2F1-204ENST00000594965 KLHL34Q8N239 644 aa29.72■■■□□ 2.35
GTF2F1-204ENST00000594965 ZNF790Q6PG37 636 aa29.7■■■□□ 2.35
GTF2F1-204ENST00000594965 MCM10Q7L590 875 aa29.7■■■□□ 2.35
GTF2F1-204ENST00000594965 VSIG10Q8N0Z9 540 aa29.7■■■□□ 2.35
GTF2F1-204ENST00000594965 CYP19A1P11511 503 aaPredicted RBP29.69■■■□□ 2.34
GTF2F1-204ENST00000594965 DCTN1Q14203 1278 aa29.68■■■□□ 2.34
GTF2F1-204ENST00000594965 TTC5Q8N0Z6 440 aa29.68■■■□□ 2.34
GTF2F1-204ENST00000594965 NLGN2Q8NFZ4 835 aa29.68■■■□□ 2.34
GTF2F1-204ENST00000594965 ZNF496Q96IT1 587 aaPredicted RBP29.68■■■□□ 2.34
GTF2F1-204ENST00000594965 HTATSF1O43719 755 aaKnown RBP29.67■■■□□ 2.34
GTF2F1-204ENST00000594965 KCNQ3O43525 872 aa29.66■■■□□ 2.34
GTF2F1-204ENST00000594965 RTF1Q92541 710 aaKnown RBP29.66■■■□□ 2.34
GTF2F1-204ENST00000594965 PRKRIP1Q9H875 184 aaPredicted RBP29.66■■■□□ 2.34
GTF2F1-204ENST00000594965 CCDC87Q9NVE4 849 aa29.66■■■□□ 2.34
GTF2F1-204ENST00000594965 HEG1Q9ULI3 1381 aa29.65■■■□□ 2.34
GTF2F1-204ENST00000594965 DCAF8L1A6NGE4 600 aa29.65■■■□□ 2.34
GTF2F1-204ENST00000594965 RFC4P35249 363 aa29.65■■■□□ 2.34
GTF2F1-204ENST00000594965 BTBD11A6QL63 1104 aa29.64■■■□□ 2.34
GTF2F1-204ENST00000594965 GYS1P13807 737 aa29.64■■■□□ 2.34
GTF2F1-204ENST00000594965 SOS1Q07889 1333 aaPredicted RBP29.64■■■□□ 2.34
GTF2F1-204ENST00000594965 ZBTB1Q9Y2K1 713 aa29.63■■■□□ 2.33
GTF2F1-204ENST00000594965 KIF13BQ9NQT8 1826 aa29.62■■■□□ 2.33
GTF2F1-204ENST00000594965 NEFMP07197 916 aa29.62■■■□□ 2.33
GTF2F1-204ENST00000594965 NFE2L2Q16236 605 aa29.61■■■□□ 2.33
GTF2F1-204ENST00000594965 NLGN1Q8N2Q7 840 aa29.61■■■□□ 2.33
GTF2F1-204ENST00000594965 SRP68Q9UHB9 627 aaKnown RBP29.61■■■□□ 2.33
GTF2F1-204ENST00000594965 CD2APQ9Y5K6 639 aa29.61■■■□□ 2.33
GTF2F1-204ENST00000594965 MMP10P09238 476 aa29.6■■■□□ 2.33
GTF2F1-204ENST00000594965 PNNQ9H307 717 aaKnown RBP29.6■■■□□ 2.33
GTF2F1-204ENST00000594965 USP42Q9H9J4 1324 aaKnown RBP29.6■■■□□ 2.33
GTF2F1-204ENST00000594965 KDM3BQ7LBC6 1761 aa29.59■■■□□ 2.33
GTF2F1-204ENST00000594965 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
GTF2F1-204ENST00000594965 CHD4Q14839 1912 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms