RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 IL13P35225 146 aa21.92■■□□□ 1.1
CIRBP-241ENST00000593048 CC2D1BQ5T0F9 858 aaKnown RBP21.92■■□□□ 1.1
CIRBP-241ENST00000593048 LINC00116Q8NCU8 138 aa21.92■■□□□ 1.1
CIRBP-241ENST00000593048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.91■■□□□ 1.1
CIRBP-241ENST00000593048 MTHFSP49914 203 aa21.91■■□□□ 1.1
CIRBP-241ENST00000593048 CABP4P57796 275 aa21.91■■□□□ 1.1
CIRBP-241ENST00000593048 RBM42Q9BTD8 480 aaKnown RBP21.91■■□□□ 1.1
CIRBP-241ENST00000593048 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
CIRBP-241ENST00000593048 ITPK1Q13572 414 aa21.9■■□□□ 1.1
CIRBP-241ENST00000593048 SMIM5Q71RC9 77 aa21.9■■□□□ 1.1
CIRBP-241ENST00000593048 NLGN2Q8NFZ4 835 aa21.9■■□□□ 1.1
CIRBP-241ENST00000593048 GOLGB1Q14789 3259 aaKnown RBP21.89■■□□□ 1.09
CIRBP-241ENST00000593048 GNPATO15228 680 aa21.89■■□□□ 1.09
CIRBP-241ENST00000593048 SSFA2P28290 1259 aa21.89■■□□□ 1.09
CIRBP-241ENST00000593048 CNGB1Q14028 1251 aaPredicted RBP21.89■■□□□ 1.09
CIRBP-241ENST00000593048 TAF1LQ8IZX4 1826 aa21.88■■□□□ 1.09
CIRBP-241ENST00000593048 PER1O15534 1290 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-241ENST00000593048 AMIGO3Q86WK7 504 aa21.88■■□□□ 1.09
CIRBP-241ENST00000593048 C1QTNF8P60827 252 aa21.86■■□□□ 1.09
CIRBP-241ENST00000593048 KDRP35968 1356 aa21.85■■□□□ 1.09
CIRBP-241ENST00000593048 KDM6AO15550 1401 aaPredicted RBP21.84■■□□□ 1.09
CIRBP-241ENST00000593048 DIAPH1O60610 1272 aaKnown RBP21.84■■□□□ 1.09
CIRBP-241ENST00000593048 HMOX1P09601 288 aa21.84■■□□□ 1.09
CIRBP-241ENST00000593048 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
CIRBP-241ENST00000593048 RTCBQ9Y3I0 505 aaKnown RBP21.84■■□□□ 1.09
CIRBP-241ENST00000593048 CD2APQ9Y5K6 639 aa21.84■■□□□ 1.09
CIRBP-241ENST00000593048 TRAPPC3LQ5T215 181 aa21.83■■□□□ 1.09
CIRBP-241ENST00000593048 PTCD1O75127 700 aaKnown RBP21.82■■□□□ 1.08
CIRBP-241ENST00000593048 AKAP4Q5JQC9 854 aa21.82■■□□□ 1.08
CIRBP-241ENST00000593048 SLC4A9Q96Q91 983 aa21.82■■□□□ 1.08
CIRBP-241ENST00000593048 GRIN3BO60391 1043 aa21.81■■□□□ 1.08
CIRBP-241ENST00000593048 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
CIRBP-241ENST00000593048 RC3H1Q5TC82 1133 aaKnown RBP21.8■■□□□ 1.08
CIRBP-241ENST00000593048 UBR3Q6ZT12 1888 aa21.79■■□□□ 1.08
CIRBP-241ENST00000593048 YBX3P16989 372 aaKnown RBP eCLIP21.78■■□□□ 1.08
CIRBP-241ENST00000593048 U2SURPO15042 1029 aaKnown RBP21.77■■□□□ 1.08
CIRBP-241ENST00000593048 CNTNAP4Q9C0A0 1308 aa21.77■■□□□ 1.07
CIRBP-241ENST00000593048 NPC1L1Q9UHC9 1359 aa21.76■■□□□ 1.07
CIRBP-241ENST00000593048 RPS6KA4O75676 772 aa21.76■■□□□ 1.07
CIRBP-241ENST00000593048 ADRA2BP18089 450 aa21.76■■□□□ 1.07
CIRBP-241ENST00000593048 RFC4P35249 363 aa21.76■■□□□ 1.07
CIRBP-241ENST00000593048 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
CIRBP-241ENST00000593048 LGR6Q9HBX8 967 aa21.76■■□□□ 1.07
CIRBP-241ENST00000593048 MMP10P09238 476 aa21.75■■□□□ 1.07
CIRBP-241ENST00000593048 MTHFSDQ2M296 383 aaKnown RBP21.75■■□□□ 1.07
CIRBP-241ENST00000593048 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
CIRBP-241ENST00000593048 SLC52A2Q9HAB3 445 aa21.75■■□□□ 1.07
CIRBP-241ENST00000593048 RNMTO43148 476 aaKnown RBP21.74■■□□□ 1.07
CIRBP-241ENST00000593048 GIGYF1O75420 1035 aaPredicted RBP21.73■■□□□ 1.07
CIRBP-241ENST00000593048 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
CIRBP-241ENST00000593048 CFAP53Q96M91 514 aa21.71■■□□□ 1.07
CIRBP-241ENST00000593048 WWC3Q9ULE0 1092 aa21.71■■□□□ 1.07
CIRBP-241ENST00000593048 ZNF831Q5JPB2 1677 aa21.71■■□□□ 1.07
CIRBP-241ENST00000593048 SLC39A6Q13433 755 aa21.7■■□□□ 1.06
CIRBP-241ENST00000593048 GYS1P13807 737 aa21.69■■□□□ 1.06
CIRBP-241ENST00000593048 PARP3Q9Y6F1 533 aa21.69■■□□□ 1.06
CIRBP-241ENST00000593048 SCN11AQ9UI33 1791 aa21.67■■□□□ 1.06
CIRBP-241ENST00000593048 DNAJC10Q8IXB1 793 aa21.67■■□□□ 1.06
CIRBP-241ENST00000593048 GAS2L2Q8NHY3 880 aa21.67■■□□□ 1.06
CIRBP-241ENST00000593048 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
CIRBP-241ENST00000593048 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-241ENST00000593048 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
CIRBP-241ENST00000593048 GNAT3A8MTJ3 354 aa21.65■■□□□ 1.06
CIRBP-241ENST00000593048 INTS5Q6P9B9 1019 aaKnown RBP21.65■■□□□ 1.06
CIRBP-241ENST00000593048 TTC5Q8N0Z6 440 aa21.65■■□□□ 1.06
CIRBP-241ENST00000593048 SRP68Q9UHB9 627 aaKnown RBP21.65■■□□□ 1.06
CIRBP-241ENST00000593048 COL3A1P02461 1466 aaPredicted RBP21.64■■□□□ 1.06
CIRBP-241ENST00000593048 TGFB2P61812 414 aa21.64■■□□□ 1.05
CIRBP-241ENST00000593048 TEFQ10587 303 aa21.64■■□□□ 1.05
CIRBP-241ENST00000593048 ATP10DQ9P241 1426 aa21.63■■□□□ 1.05
CIRBP-241ENST00000593048 ADCY9O60503 1353 aa21.63■■□□□ 1.05
CIRBP-241ENST00000593048 ZPR1O75312 459 aa21.63■■□□□ 1.05
CIRBP-241ENST00000593048 CEP350Q5VT06 3117 aa21.63■■□□□ 1.05
CIRBP-241ENST00000593048 MRC1P22897 1456 aa21.63■■□□□ 1.05
CIRBP-241ENST00000593048 CICQ96RK0 1608 aaPredicted RBP21.62■■□□□ 1.05
CIRBP-241ENST00000593048 USP42Q9H9J4 1324 aaKnown RBP21.62■■□□□ 1.05
CIRBP-241ENST00000593048 A0A0G2JLW4 131 aa21.61■■□□□ 1.05
CIRBP-241ENST00000593048 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
CIRBP-241ENST00000593048 PPP2R1AP30153 589 aa21.61■■□□□ 1.05
CIRBP-241ENST00000593048 PRKAR2BP31323 418 aa21.61■■□□□ 1.05
CIRBP-241ENST00000593048 FKBP8Q14318 412 aa21.61■■□□□ 1.05
CIRBP-241ENST00000593048 VSIG10Q8N0Z9 540 aa21.61■■□□□ 1.05
CIRBP-241ENST00000593048 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
CIRBP-241ENST00000593048 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
CIRBP-241ENST00000593048 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
CIRBP-241ENST00000593048 IL17REQ8NFR9 667 aa21.6■■□□□ 1.05
CIRBP-241ENST00000593048 BCS1LQ9Y276 419 aa21.6■■□□□ 1.05
CIRBP-241ENST00000593048 TJP1Q07157 1748 aa21.6■■□□□ 1.05
CIRBP-241ENST00000593048 USPL1Q5W0Q7 1092 aa21.59■■□□□ 1.05
CIRBP-241ENST00000593048 SOS1Q07889 1333 aaPredicted RBP21.58■■□□□ 1.05
CIRBP-241ENST00000593048 C10orf71Q711Q0 1435 aa21.58■■□□□ 1.05
CIRBP-241ENST00000593048 STARD3NLO95772 234 aa21.58■■□□□ 1.05
CIRBP-241ENST00000593048 DPEP1P16444 411 aa21.58■■□□□ 1.05
CIRBP-241ENST00000593048 PHACTR3Q96KR7 559 aa21.58■■□□□ 1.05
CIRBP-241ENST00000593048 RSPH6AQ9H0K4 717 aa21.58■■□□□ 1.05
CIRBP-241ENST00000593048 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.04
CIRBP-241ENST00000593048 CANXP27824 592 aaKnown RBP21.57■■□□□ 1.04
CIRBP-241ENST00000593048 ZBTB1Q9Y2K1 713 aa21.57■■□□□ 1.04
CIRBP-241ENST00000593048 C4AP0C0L4 1744 aa21.57■■□□□ 1.04
CIRBP-241ENST00000593048 KCPQ6ZWJ8 1503 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms