RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SMARCC1Q92922 1105 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-221ENST00000593026 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
DDX39A-221ENST00000593026 TXNRD1Q16881 649 aa19.69■□□□□ 0.74
DDX39A-221ENST00000593026 MCM10Q7L590 875 aa19.69■□□□□ 0.74
DDX39A-221ENST00000593026 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
DDX39A-221ENST00000593026 MIER1Q8N108 512 aa19.69■□□□□ 0.74
DDX39A-221ENST00000593026 LY75O60449 1722 aa19.68■□□□□ 0.74
DDX39A-221ENST00000593026 RIPK4P57078 832 aa19.68■□□□□ 0.74
DDX39A-221ENST00000593026 DCTN1Q14203 1278 aa19.68■□□□□ 0.74
DDX39A-221ENST00000593026 ASAP1Q9ULH1 1129 aa19.68■□□□□ 0.74
DDX39A-221ENST00000593026 RRP7AQ9Y3A4 280 aaKnown RBP19.68■□□□□ 0.74
DDX39A-221ENST00000593026 NUP188Q5SRE5 1749 aa19.68■□□□□ 0.74
DDX39A-221ENST00000593026 LMOD3Q0VAK6 560 aa19.67■□□□□ 0.74
DDX39A-221ENST00000593026 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
DDX39A-221ENST00000593026 SIPA1L3O60292 1781 aaPredicted RBP19.66■□□□□ 0.74
DDX39A-221ENST00000593026 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
DDX39A-221ENST00000593026 PROM2Q8N271 834 aa19.66■□□□□ 0.74
DDX39A-221ENST00000593026 APAF1O14727 1248 aa19.65■□□□□ 0.74
DDX39A-221ENST00000593026 SLC27A3Q5K4L6 730 aa19.65■□□□□ 0.74
DDX39A-221ENST00000593026 CCNL1Q9UK58 526 aaPredicted RBP19.65■□□□□ 0.74
DDX39A-221ENST00000593026 PAPPAQ13219 1627 aa19.64■□□□□ 0.73
DDX39A-221ENST00000593026 THUMPD2Q9BTF0 503 aaKnown RBP19.63■□□□□ 0.73
DDX39A-221ENST00000593026 LOC102724428A0A0B4J2F2 783 aa19.62■□□□□ 0.73
DDX39A-221ENST00000593026 SIK1P57059 783 aa19.62■□□□□ 0.73
DDX39A-221ENST00000593026 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
DDX39A-221ENST00000593026 LRRC4BQ9NT99 713 aa19.62■□□□□ 0.73
DDX39A-221ENST00000593026 KCNQ4P56696 695 aa19.61■□□□□ 0.73
DDX39A-221ENST00000593026 SLC39A6Q13433 755 aa19.61■□□□□ 0.73
DDX39A-221ENST00000593026 BTBD11A6QL63 1104 aa19.6■□□□□ 0.73
DDX39A-221ENST00000593026 PTCD1O75127 700 aaKnown RBP19.6■□□□□ 0.73
DDX39A-221ENST00000593026 TAF7Q15545 349 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-221ENST00000593026 NBPF14Q5TI25 921 aa19.6■□□□□ 0.73
DDX39A-221ENST00000593026 TTC5Q8N0Z6 440 aa19.6■□□□□ 0.73
DDX39A-221ENST00000593026 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
DDX39A-221ENST00000593026 ZNF790Q6PG37 636 aa19.59■□□□□ 0.73
DDX39A-221ENST00000593026 UBR2Q8IWV8 1755 aa19.59■□□□□ 0.73
DDX39A-221ENST00000593026 C5P01031 1676 aa19.59■□□□□ 0.73
DDX39A-221ENST00000593026 ZNF831Q5JPB2 1677 aa19.59■□□□□ 0.73
DDX39A-221ENST00000593026 KCPQ6ZWJ8 1503 aa19.58■□□□□ 0.73
DDX39A-221ENST00000593026 ATP6V1AP38606 617 aa19.58■□□□□ 0.72
DDX39A-221ENST00000593026 SENP3-EIF4A1A0A087X0R7 540 aa19.57■□□□□ 0.72
DDX39A-221ENST00000593026 HMGB2P26583 209 aaKnown RBP19.57■□□□□ 0.72
DDX39A-221ENST00000593026 ANO8Q9HCE9 1232 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-221ENST00000593026 TAF1LQ8IZX4 1826 aa19.57■□□□□ 0.72
DDX39A-221ENST00000593026 STK32BQ9NY57 414 aa19.56■□□□□ 0.72
DDX39A-221ENST00000593026 SLC4A9Q96Q91 983 aa19.55■□□□□ 0.72
DDX39A-221ENST00000593026 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-221ENST00000593026 ITPK1Q13572 414 aa19.54■□□□□ 0.72
DDX39A-221ENST00000593026 ZNF496Q96IT1 587 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-221ENST00000593026 MIS18AQ9NYP9 233 aa19.54■□□□□ 0.72
DDX39A-221ENST00000593026 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
DDX39A-221ENST00000593026 TJP1Q07157 1748 aa19.54■□□□□ 0.72
DDX39A-221ENST00000593026 KCNQ3O43525 872 aa19.53■□□□□ 0.72
DDX39A-221ENST00000593026 CALD1Q05682 793 aaKnown RBP19.53■□□□□ 0.72
DDX39A-221ENST00000593026 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
DDX39A-221ENST00000593026 SLC15A2Q16348 729 aa19.53■□□□□ 0.72
DDX39A-221ENST00000593026 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
DDX39A-221ENST00000593026 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
DDX39A-221ENST00000593026 LINC00116Q8NCU8 138 aa19.53■□□□□ 0.72
DDX39A-221ENST00000593026 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
DDX39A-221ENST00000593026 FMNL2Q96PY5 1086 aa19.53■□□□□ 0.72
DDX39A-221ENST00000593026 C4BP0C0L5 1744 aa19.53■□□□□ 0.72
DDX39A-221ENST00000593026 COL5A3P25940 1745 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-221ENST00000593026 ZNF827Q17R98 1081 aa19.52■□□□□ 0.72
DDX39A-221ENST00000593026 VSIG10Q8N0Z9 540 aa19.52■□□□□ 0.72
DDX39A-221ENST00000593026 TSPYL4Q9UJ04 414 aa19.52■□□□□ 0.72
DDX39A-221ENST00000593026 HEG1Q9ULI3 1381 aa19.52■□□□□ 0.72
DDX39A-221ENST00000593026 PSDA5PKW4 1024 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-221ENST00000593026 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
DDX39A-221ENST00000593026 AK7Q96M32 723 aa19.51■□□□□ 0.71
DDX39A-221ENST00000593026 BABAM1Q9NWV8 329 aa19.51■□□□□ 0.71
DDX39A-221ENST00000593026 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-221ENST00000593026 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
DDX39A-221ENST00000593026 WWC1Q8IX03 1113 aa19.5■□□□□ 0.71
DDX39A-221ENST00000593026 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
DDX39A-221ENST00000593026 TFCP2L1Q9NZI6 479 aa19.5■□□□□ 0.71
DDX39A-221ENST00000593026 CHL1O00533 1208 aa19.48■□□□□ 0.71
DDX39A-221ENST00000593026 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
DDX39A-221ENST00000593026 TUBGCP6Q96RT7 1819 aa19.48■□□□□ 0.71
DDX39A-221ENST00000593026 CNTNAP4Q9C0A0 1308 aa19.48■□□□□ 0.71
DDX39A-221ENST00000593026 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
DDX39A-221ENST00000593026 GNAI1P63096 354 aa19.47■□□□□ 0.71
DDX39A-221ENST00000593026 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-221ENST00000593026 IFT57Q9NWB7 429 aa19.47■□□□□ 0.71
DDX39A-221ENST00000593026 QSER1Q2KHR3 1735 aa19.47■□□□□ 0.71
DDX39A-221ENST00000593026 GNPATO15228 680 aa19.46■□□□□ 0.71
DDX39A-221ENST00000593026 SNRPA1P09661 255 aaKnown RBP19.46■□□□□ 0.71
DDX39A-221ENST00000593026 CYP19A1P11511 503 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-221ENST00000593026 CRKLP46109 303 aaKnown RBP19.46■□□□□ 0.71
DDX39A-221ENST00000593026 RC3H1Q5TC82 1133 aaKnown RBP19.46■□□□□ 0.71
DDX39A-221ENST00000593026 STARD3NLO95772 234 aa19.45■□□□□ 0.7
DDX39A-221ENST00000593026 ZNF853P0CG23 659 aa19.45■□□□□ 0.7
DDX39A-221ENST00000593026 UBR3Q6ZT12 1888 aa19.45■□□□□ 0.7
DDX39A-221ENST00000593026 WDR63Q8IWG1 891 aa19.44■□□□□ 0.7
DDX39A-221ENST00000593026 MBIPQ9NS73 344 aa19.44■□□□□ 0.7
DDX39A-221ENST00000593026 CCDC87Q9NVE4 849 aa19.44■□□□□ 0.7
DDX39A-221ENST00000593026 IL16Q14005 1332 aa19.44■□□□□ 0.7
DDX39A-221ENST00000593026 PNPLA7Q6ZV29 1317 aa19.44■□□□□ 0.7
DDX39A-221ENST00000593026 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
DDX39A-221ENST00000593026 LAMB4A4D0S4 1761 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms