RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 LINC00116Q8NCU8 138 aa31.61■■■□□ 2.65
MBD3-211ENST00000592965 CHD4Q14839 1912 aa31.6■■■□□ 2.65
MBD3-211ENST00000592965 CC2D1BQ5T0F9 858 aaKnown RBP31.6■■■□□ 2.65
MBD3-211ENST00000592965 SCN11AQ9UI33 1791 aa31.59■■■□□ 2.65
MBD3-211ENST00000592965 ITPK1Q13572 414 aa31.59■■■□□ 2.65
MBD3-211ENST00000592965 C1orf141Q5JVX7 400 aa31.59■■■□□ 2.65
MBD3-211ENST00000592965 AMIGO3Q86WK7 504 aa31.59■■■□□ 2.65
MBD3-211ENST00000592965 MSL1Q68DK7 614 aa31.58■■■□□ 2.65
MBD3-211ENST00000592965 SSFA2P28290 1259 aa31.57■■■□□ 2.64
MBD3-211ENST00000592965 ATP6V1AP38606 617 aa31.57■■■□□ 2.64
MBD3-211ENST00000592965 KLHL34Q8N239 644 aa31.57■■■□□ 2.64
MBD3-211ENST00000592965 COL5A3P25940 1745 aaPredicted RBP31.57■■■□□ 2.64
MBD3-211ENST00000592965 GOLGB1Q14789 3259 aaKnown RBP31.56■■■□□ 2.64
MBD3-211ENST00000592965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.55■■■□□ 2.64
MBD3-211ENST00000592965 CABP4P57796 275 aa31.55■■■□□ 2.64
MBD3-211ENST00000592965 COL3A1P02461 1466 aaPredicted RBP31.52■■■□□ 2.64
MBD3-211ENST00000592965 PHF14O94880 888 aa31.52■■■□□ 2.64
MBD3-211ENST00000592965 VIRMAQ69YN4 1812 aaKnown RBP31.52■■■□□ 2.64
MBD3-211ENST00000592965 GNPATO15228 680 aa31.51■■■□□ 2.63
MBD3-211ENST00000592965 DIAPH1O60610 1272 aaKnown RBP31.51■■■□□ 2.63
MBD3-211ENST00000592965 NLGN2Q8NFZ4 835 aa31.51■■■□□ 2.63
MBD3-211ENST00000592965 SLC4A9Q96Q91 983 aa31.51■■■□□ 2.63
MBD3-211ENST00000592965 CICQ96RK0 1608 aaPredicted RBP31.49■■■□□ 2.63
MBD3-211ENST00000592965 AKAP4Q5JQC9 854 aa31.49■■■□□ 2.63
MBD3-211ENST00000592965 SMIM5Q71RC9 77 aa31.49■■■□□ 2.63
MBD3-211ENST00000592965 HMOX1P09601 288 aa31.48■■■□□ 2.63
MBD3-211ENST00000592965 RBM42Q9BTD8 480 aaKnown RBP31.48■■■□□ 2.63
MBD3-211ENST00000592965 GPR162Q16538 588 aa31.47■■■□□ 2.63
MBD3-211ENST00000592965 MRC1P22897 1456 aa31.46■■■□□ 2.63
MBD3-211ENST00000592965 ADAMTS7Q9UKP4 1686 aa31.46■■■□□ 2.63
MBD3-211ENST00000592965 NFATC2IPQ8NCF5 419 aa31.46■■■□□ 2.63
MBD3-211ENST00000592965 CD2APQ9Y5K6 639 aa31.46■■■□□ 2.63
MBD3-211ENST00000592965 MYH14Q7Z406 1995 aaKnown RBP31.46■■■□□ 2.63
MBD3-211ENST00000592965 CNTNAP4Q9C0A0 1308 aa31.46■■■□□ 2.63
MBD3-211ENST00000592965 RC3H1Q5TC82 1133 aaKnown RBP31.45■■■□□ 2.63
MBD3-211ENST00000592965 TJP1Q07157 1748 aa31.44■■■□□ 2.62
MBD3-211ENST00000592965 RTCBQ9Y3I0 505 aaKnown RBP31.42■■■□□ 2.62
MBD3-211ENST00000592965 ADRA2BP18089 450 aa31.4■■■□□ 2.62
MBD3-211ENST00000592965 CNGB1Q14028 1251 aaPredicted RBP31.4■■■□□ 2.62
MBD3-211ENST00000592965 SLC52A2Q9HAB3 445 aa31.4■■■□□ 2.62
MBD3-211ENST00000592965 C4AP0C0L4 1744 aa31.39■■■□□ 2.62
MBD3-211ENST00000592965 PTCD1O75127 700 aaKnown RBP31.39■■■□□ 2.62
MBD3-211ENST00000592965 MTHFSDQ2M296 383 aaKnown RBP31.39■■■□□ 2.62
MBD3-211ENST00000592965 TRAPPC3LQ5T215 181 aa31.38■■■□□ 2.61
MBD3-211ENST00000592965 PELP1Q8IZL8 1130 aaKnown RBP31.38■■■□□ 2.61
MBD3-211ENST00000592965 LGR6Q9HBX8 967 aa31.38■■■□□ 2.61
MBD3-211ENST00000592965 RNMTO43148 476 aaKnown RBP31.37■■■□□ 2.61
MBD3-211ENST00000592965 RPS6KA4O75676 772 aa31.36■■■□□ 2.61
MBD3-211ENST00000592965 U2SURPO15042 1029 aaKnown RBP31.34■■■□□ 2.61
MBD3-211ENST00000592965 YBX3P16989 372 aaKnown RBP eCLIP31.34■■■□□ 2.61
MBD3-211ENST00000592965 ZNF784Q8NCA9 323 aaPredicted RBP31.34■■■□□ 2.61
MBD3-211ENST00000592965 ARHGEF1Q92888 912 aaKnown RBP31.33■■■□□ 2.61
MBD3-211ENST00000592965 KIF13BQ9NQT8 1826 aa31.33■■■□□ 2.61
MBD3-211ENST00000592965 GRIN3BO60391 1043 aa31.32■■■□□ 2.6
MBD3-211ENST00000592965 CRKLP46109 303 aaKnown RBP31.32■■■□□ 2.6
MBD3-211ENST00000592965 KCPQ6ZWJ8 1503 aa31.32■■■□□ 2.6
MBD3-211ENST00000592965 UBR2Q8IWV8 1755 aa31.31■■■□□ 2.6
MBD3-211ENST00000592965 MMP10P09238 476 aa31.31■■■□□ 2.6
MBD3-211ENST00000592965 NLGN1Q8N2Q7 840 aa31.31■■■□□ 2.6
MBD3-211ENST00000592965 CFAP53Q96M91 514 aa31.31■■■□□ 2.6
MBD3-211ENST00000592965 RFC4P35249 363 aa31.29■■■□□ 2.6
MBD3-211ENST00000592965 GAS2L2Q8NHY3 880 aa31.28■■■□□ 2.6
MBD3-211ENST00000592965 GYS1P13807 737 aa31.27■■■□□ 2.6
MBD3-211ENST00000592965 SIPA1L3O60292 1781 aaPredicted RBP31.27■■■□□ 2.6
MBD3-211ENST00000592965 PPP2R1AP30153 589 aa31.26■■■□□ 2.59
MBD3-211ENST00000592965 SLC39A6Q13433 755 aa31.26■■■□□ 2.59
MBD3-211ENST00000592965 KIAA1551Q9HCM1 1747 aa31.25■■■□□ 2.59
MBD3-211ENST00000592965 DNAJC10Q8IXB1 793 aa31.25■■■□□ 2.59
MBD3-211ENST00000592965 INTS5Q6P9B9 1019 aaKnown RBP31.24■■■□□ 2.59
MBD3-211ENST00000592965 C10orf71Q711Q0 1435 aa31.24■■■□□ 2.59
MBD3-211ENST00000592965 GNAT3A8MTJ3 354 aa31.23■■■□□ 2.59
MBD3-211ENST00000592965 RSPH6AQ9H0K4 717 aa31.23■■■□□ 2.59
MBD3-211ENST00000592965 CCDC87Q9NVE4 849 aa31.22■■■□□ 2.59
MBD3-211ENST00000592965 NUDCQ9Y266 331 aa31.22■■■□□ 2.59
MBD3-211ENST00000592965 USP42Q9H9J4 1324 aaKnown RBP31.22■■■□□ 2.59
MBD3-211ENST00000592965 VSIG10Q8N0Z9 540 aa31.21■■■□□ 2.59
MBD3-211ENST00000592965 CYP19A1P11511 503 aaPredicted RBP31.2■■■□□ 2.59
MBD3-211ENST00000592965 PRKAR2BP31323 418 aa31.2■■■□□ 2.59
MBD3-211ENST00000592965 PXDNLA1KZ92 1463 aa31.2■■■□□ 2.58
MBD3-211ENST00000592965 IL17REQ8NFR9 667 aa31.19■■■□□ 2.58
MBD3-211ENST00000592965 SOS1Q07889 1333 aaPredicted RBP31.19■■■□□ 2.58
MBD3-211ENST00000592965 SRP68Q9UHB9 627 aaKnown RBP31.18■■■□□ 2.58
MBD3-211ENST00000592965 CEMIPQ8WUJ3 1361 aa31.17■■■□□ 2.58
MBD3-211ENST00000592965 N4BP2Q86UW6 1770 aaPredicted RBP31.17■■■□□ 2.58
MBD3-211ENST00000592965 TEFQ10587 303 aa31.17■■■□□ 2.58
MBD3-211ENST00000592965 PHACTR3Q96KR7 559 aa31.17■■■□□ 2.58
MBD3-211ENST00000592965 TTC5Q8N0Z6 440 aa31.16■■■□□ 2.58
MBD3-211ENST00000592965 PARP3Q9Y6F1 533 aa31.16■■■□□ 2.58
MBD3-211ENST00000592965 TGFB2P61812 414 aa31.15■■■□□ 2.58
MBD3-211ENST00000592965 U2AF1L5P0DN76 240 aaPredicted RBP31.14■■■□□ 2.58
MBD3-211ENST00000592965 U2AF1Q01081 240 aaKnown RBP eCLIP31.14■■■□□ 2.58
MBD3-211ENST00000592965 FKBP8Q14318 412 aa31.14■■■□□ 2.58
MBD3-211ENST00000592965 BRCA1P38398 1863 aaKnown RBP31.14■■■□□ 2.58
MBD3-211ENST00000592965 FCHSD2O94868 740 aa31.12■■■□□ 2.57
MBD3-211ENST00000592965 ZNF790Q6PG37 636 aa31.12■■■□□ 2.57
MBD3-211ENST00000592965 ZBTB1Q9Y2K1 713 aa31.12■■■□□ 2.57
MBD3-211ENST00000592965 COL15A1P39059 1388 aa31.12■■■□□ 2.57
MBD3-211ENST00000592965 WWC3Q9ULE0 1092 aa31.11■■■□□ 2.57
MBD3-211ENST00000592965 HEG1Q9ULI3 1381 aa31.1■■■□□ 2.57
MBD3-211ENST00000592965 ZPR1O75312 459 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms