RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TRAPPC3LQ5T215 181 aa27.22■■□□□ 1.95
PRKCSH-216ENST00000592445 BCS1LQ9Y276 419 aa27.22■■□□□ 1.95
PRKCSH-216ENST00000592445 PXDNLA1KZ92 1463 aa27.21■■□□□ 1.95
PRKCSH-216ENST00000592445 TGFB2P61812 414 aa27.21■■□□□ 1.95
PRKCSH-216ENST00000592445 RTCBQ9Y3I0 505 aaKnown RBP27.21■■□□□ 1.95
PRKCSH-216ENST00000592445 CICQ96RK0 1608 aaPredicted RBP27.2■■□□□ 1.95
PRKCSH-216ENST00000592445 A0A0G2JLW4 131 aa27.2■■□□□ 1.94
PRKCSH-216ENST00000592445 APLP1P51693 650 aa27.2■■□□□ 1.94
PRKCSH-216ENST00000592445 NLGN1Q8N2Q7 840 aa27.2■■□□□ 1.94
PRKCSH-216ENST00000592445 ARHGAP27Q6ZUM4 889 aa27.19■■□□□ 1.94
PRKCSH-216ENST00000592445 RBM42Q9BTD8 480 aaKnown RBP27.18■■□□□ 1.94
PRKCSH-216ENST00000592445 ANKRD26Q9UPS8 1709 aa27.16■■□□□ 1.94
PRKCSH-216ENST00000592445 TOMM70O94826 608 aa27.16■■□□□ 1.94
PRKCSH-216ENST00000592445 CCDC87Q9NVE4 849 aa27.16■■□□□ 1.94
PRKCSH-216ENST00000592445 POLKQ9UBT6 870 aa27.16■■□□□ 1.94
PRKCSH-216ENST00000592445 ADRA2BP18089 450 aa27.14■■□□□ 1.94
PRKCSH-216ENST00000592445 RFC4P35249 363 aa27.14■■□□□ 1.94
PRKCSH-216ENST00000592445 ARHGEF1Q92888 912 aaKnown RBP27.14■■□□□ 1.94
PRKCSH-216ENST00000592445 N4BP2Q86UW6 1770 aaPredicted RBP27.14■■□□□ 1.93
PRKCSH-216ENST00000592445 KIF13BQ9NQT8 1826 aa27.13■■□□□ 1.93
PRKCSH-216ENST00000592445 KDRP35968 1356 aa27.13■■□□□ 1.93
PRKCSH-216ENST00000592445 FCHSD2O94868 740 aa27.13■■□□□ 1.93
PRKCSH-216ENST00000592445 DPEP1P16444 411 aa27.13■■□□□ 1.93
PRKCSH-216ENST00000592445 EIF4A2Q14240 407 aaKnown RBP27.13■■□□□ 1.93
PRKCSH-216ENST00000592445 PARP3Q9Y6F1 533 aa27.13■■□□□ 1.93
PRKCSH-216ENST00000592445 C10orf71Q711Q0 1435 aa27.13■■□□□ 1.93
PRKCSH-216ENST00000592445 ERVV-2B6SEH9 535 aa27.12■■□□□ 1.93
PRKCSH-216ENST00000592445 TNNT2P45379 298 aaPredicted RBP27.12■■□□□ 1.93
PRKCSH-216ENST00000592445 SLC4A9Q96Q91 983 aa27.12■■□□□ 1.93
PRKCSH-216ENST00000592445 KIAA1551Q9HCM1 1747 aa27.11■■□□□ 1.93
PRKCSH-216ENST00000592445 RC3H1Q5TC82 1133 aaKnown RBP27.11■■□□□ 1.93
PRKCSH-216ENST00000592445 NMRK2Q9NPI5 230 aa27.11■■□□□ 1.93
PRKCSH-216ENST00000592445 HSP90AB1P08238 724 aaKnown RBP27.1■■□□□ 1.93
PRKCSH-216ENST00000592445 GYS1P13807 737 aa27.1■■□□□ 1.93
PRKCSH-216ENST00000592445 DCAF5Q96JK2 942 aa27.09■■□□□ 1.93
PRKCSH-216ENST00000592445 CNTNAP4Q9C0A0 1308 aa27.09■■□□□ 1.93
PRKCSH-216ENST00000592445 RPS6KA4O75676 772 aa27.08■■□□□ 1.93
PRKCSH-216ENST00000592445 C4AP0C0L4 1744 aa27.07■■□□□ 1.92
PRKCSH-216ENST00000592445 DNAJC5GQ8N7S2 189 aa27.07■■□□□ 1.92
PRKCSH-216ENST00000592445 POLR3GLQ9BT43 218 aa27.07■■□□□ 1.92
PRKCSH-216ENST00000592445 PLEKHG2Q9H7P9 1386 aa27.07■■□□□ 1.92
PRKCSH-216ENST00000592445 CABP4P57796 275 aa27.06■■□□□ 1.92
PRKCSH-216ENST00000592445 PLEKHO1Q53GL0 409 aaPredicted RBP27.06■■□□□ 1.92
PRKCSH-216ENST00000592445 C9orf131Q5VYM1 1079 aa27.06■■□□□ 1.92
PRKCSH-216ENST00000592445 C16orf71Q8IYS4 520 aaPredicted RBP27.06■■□□□ 1.92
PRKCSH-216ENST00000592445 ZNF831Q5JPB2 1677 aa27.05■■□□□ 1.92
PRKCSH-216ENST00000592445 ZNF530Q6P9A1 599 aaPredicted RBP27.04■■□□□ 1.92
PRKCSH-216ENST00000592445 PIM2Q9P1W9 311 aa27.04■■□□□ 1.92
PRKCSH-216ENST00000592445 RBM46Q8TBY0 533 aaKnown RBP27.03■■□□□ 1.92
PRKCSH-216ENST00000592445 COL5A3P25940 1745 aaPredicted RBP27.02■■□□□ 1.92
PRKCSH-216ENST00000592445 PTCD1O75127 700 aaKnown RBP27.02■■□□□ 1.92
PRKCSH-216ENST00000592445 KCNA3P22001 575 aa27.02■■□□□ 1.92
PRKCSH-216ENST00000592445 DALRD3Q5D0E6 543 aaKnown RBP27.01■■□□□ 1.91
PRKCSH-216ENST00000592445 MTHFSP49914 203 aa27■■□□□ 1.91
PRKCSH-216ENST00000592445 AMOTQ4VCS5 1084 aa27■■□□□ 1.91
PRKCSH-216ENST00000592445 KDM6AO15550 1401 aaPredicted RBP26.99■■□□□ 1.91
PRKCSH-216ENST00000592445 SRP68Q9UHB9 627 aaKnown RBP26.99■■□□□ 1.91
PRKCSH-216ENST00000592445 BRCA1P38398 1863 aaKnown RBP26.98■■□□□ 1.91
PRKCSH-216ENST00000592445 KDM2BQ8NHM5 1336 aa26.98■■□□□ 1.91
PRKCSH-216ENST00000592445 CRKLP46109 303 aaKnown RBP26.98■■□□□ 1.91
PRKCSH-216ENST00000592445 C1orf141Q5JVX7 400 aa26.98■■□□□ 1.91
PRKCSH-216ENST00000592445 FKBP8Q14318 412 aa26.97■■□□□ 1.91
PRKCSH-216ENST00000592445 RNF181Q9P0P0 153 aa26.97■■□□□ 1.91
PRKCSH-216ENST00000592445 NFATC2IPQ8NCF5 419 aa26.96■■□□□ 1.91
PRKCSH-216ENST00000592445 USP42Q9H9J4 1324 aaKnown RBP26.95■■□□□ 1.91
PRKCSH-216ENST00000592445 MYH14Q7Z406 1995 aaKnown RBP26.95■■□□□ 1.91
PRKCSH-216ENST00000592445 HTRA3P83110 453 aa26.95■■□□□ 1.9
PRKCSH-216ENST00000592445 DDR1Q08345 913 aa26.95■■□□□ 1.9
PRKCSH-216ENST00000592445 FSTL1Q12841 308 aa26.95■■□□□ 1.9
PRKCSH-216ENST00000592445 WDR90Q96KV7 1748 aa26.95■■□□□ 1.9
PRKCSH-216ENST00000592445 ARFGEF1Q9Y6D6 1849 aa26.95■■□□□ 1.9
PRKCSH-216ENST00000592445 KCPQ6ZWJ8 1503 aa26.94■■□□□ 1.9
PRKCSH-216ENST00000592445 CHRNA5P30532 468 aa26.93■■□□□ 1.9
PRKCSH-216ENST00000592445 AEBP1Q8IUX7 1158 aa26.93■■□□□ 1.9
PRKCSH-216ENST00000592445 KLRG1Q96E93 195 aa26.93■■□□□ 1.9
PRKCSH-216ENST00000592445 RRAGCQ9HB90 399 aa26.92■■□□□ 1.9
PRKCSH-216ENST00000592445 ZPR1O75312 459 aa26.89■■□□□ 1.9
PRKCSH-216ENST00000592445 PANK3Q9H999 370 aa26.89■■□□□ 1.9
PRKCSH-216ENST00000592445 POLRMTO00411 1230 aaKnown RBP26.88■■□□□ 1.89
PRKCSH-216ENST00000592445 SULT6B1Q6IMI4 303 aa26.88■■□□□ 1.89
PRKCSH-216ENST00000592445 INTS5Q6P9B9 1019 aaKnown RBP26.88■■□□□ 1.89
PRKCSH-216ENST00000592445 TM4SF1P30408 202 aa26.87■■□□□ 1.89
PRKCSH-216ENST00000592445 JMYQ8N9B5 988 aa26.87■■□□□ 1.89
PRKCSH-216ENST00000592445 USPL1Q5W0Q7 1092 aa26.86■■□□□ 1.89
PRKCSH-216ENST00000592445 MORC1Q86VD1 984 aa26.86■■□□□ 1.89
PRKCSH-216ENST00000592445 TIMELESSQ9UNS1 1208 aa26.86■■□□□ 1.89
PRKCSH-216ENST00000592445 TJP1Q07157 1748 aa26.85■■□□□ 1.89
PRKCSH-216ENST00000592445 SMC1BQ8NDV3 1235 aa26.85■■□□□ 1.89
PRKCSH-216ENST00000592445 COL13A1Q5TAT6 717 aaPredicted RBP26.84■■□□□ 1.89
PRKCSH-216ENST00000592445 DNAJC10Q8IXB1 793 aa26.84■■□□□ 1.89
PRKCSH-216ENST00000592445 TNRC6CQ9HCJ0 1690 aaKnown RBP26.82■■□□□ 1.88
PRKCSH-216ENST00000592445 RASSF7Q02833 373 aa26.81■■□□□ 1.88
PRKCSH-216ENST00000592445 SOS1Q07889 1333 aaPredicted RBP26.81■■□□□ 1.88
PRKCSH-216ENST00000592445 ZC3H4Q9UPT8 1303 aaKnown RBP26.81■■□□□ 1.88
PRKCSH-216ENST00000592445 AKAP4Q5JQC9 854 aa26.8■■□□□ 1.88
PRKCSH-216ENST00000592445 PCNTO95613 3336 aa26.79■■□□□ 1.88
PRKCSH-216ENST00000592445 SBF1O95248 1867 aa26.79■■□□□ 1.88
PRKCSH-216ENST00000592445 NFIXQ14938 502 aa26.79■■□□□ 1.88
PRKCSH-216ENST00000592445 SLC52A2Q9HAB3 445 aa26.79■■□□□ 1.88
PRKCSH-216ENST00000592445 LMNB1P20700 586 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms