RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 SLC4A9Q96Q91 983 aa25.32■■□□□ 1.64
CIRBP-238ENST00000592412 PLEKHG2Q9H7P9 1386 aa25.31■■□□□ 1.64
CIRBP-238ENST00000592412 CICQ96RK0 1608 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-238ENST00000592412 GPBP1L1Q9HC44 474 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-238ENST00000592412 KIF13BQ9NQT8 1826 aa25.29■■□□□ 1.64
CIRBP-238ENST00000592412 TNNT2P45379 298 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-238ENST00000592412 ZNF831Q5JPB2 1677 aa25.29■■□□□ 1.64
CIRBP-238ENST00000592412 ZNF526Q8TF50 670 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-238ENST00000592412 PXDNLA1KZ92 1463 aa25.28■■□□□ 1.64
CIRBP-238ENST00000592412 COL5A3P25940 1745 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-238ENST00000592412 MMP10P09238 476 aa25.27■■□□□ 1.64
CIRBP-238ENST00000592412 TIMELESSQ9UNS1 1208 aa25.27■■□□□ 1.64
CIRBP-238ENST00000592412 KDM6AO15550 1401 aaPredicted RBP25.26■■□□□ 1.63
CIRBP-238ENST00000592412 N4BP2Q86UW6 1770 aaPredicted RBP25.23■■□□□ 1.63
CIRBP-238ENST00000592412 C10orf71Q711Q0 1435 aa25.23■■□□□ 1.63
CIRBP-238ENST00000592412 ERVV-2B6SEH9 535 aa25.23■■□□□ 1.63
CIRBP-238ENST00000592412 POLR3GLQ9BT43 218 aa25.23■■□□□ 1.63
CIRBP-238ENST00000592412 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
CIRBP-238ENST00000592412 DCAF5Q96JK2 942 aa25.21■■□□□ 1.63
CIRBP-238ENST00000592412 RTCBQ9Y3I0 505 aaKnown RBP25.21■■□□□ 1.63
CIRBP-238ENST00000592412 MYH14Q7Z406 1995 aaKnown RBP25.2■■□□□ 1.63
CIRBP-238ENST00000592412 KIF3CO14782 793 aa25.2■■□□□ 1.62
CIRBP-238ENST00000592412 RC3H1Q5TC82 1133 aaKnown RBP25.2■■□□□ 1.62
CIRBP-238ENST00000592412 ARHGEF1Q92888 912 aaKnown RBP25.2■■□□□ 1.62
CIRBP-238ENST00000592412 RBM42Q9BTD8 480 aaKnown RBP25.2■■□□□ 1.62
CIRBP-238ENST00000592412 C4AP0C0L4 1744 aa25.2■■□□□ 1.62
CIRBP-238ENST00000592412 CNTNAP4Q9C0A0 1308 aa25.19■■□□□ 1.62
CIRBP-238ENST00000592412 HSPA6P17066 643 aa25.19■■□□□ 1.62
CIRBP-238ENST00000592412 GYS1P13807 737 aa25.18■■□□□ 1.62
CIRBP-238ENST00000592412 AEBP1Q8IUX7 1158 aa25.18■■□□□ 1.62
CIRBP-238ENST00000592412 PANK3Q9H999 370 aa25.18■■□□□ 1.62
CIRBP-238ENST00000592412 A0A0G2JLW4 131 aa25.17■■□□□ 1.62
CIRBP-238ENST00000592412 HSP90AB1P08238 724 aaKnown RBP25.17■■□□□ 1.62
CIRBP-238ENST00000592412 TGFB2P61812 414 aa25.17■■□□□ 1.62
CIRBP-238ENST00000592412 ZNF530Q6P9A1 599 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-238ENST00000592412 NLGN1Q8N2Q7 840 aa25.17■■□□□ 1.62
CIRBP-238ENST00000592412 RPS6KA4O75676 772 aa25.16■■□□□ 1.62
CIRBP-238ENST00000592412 ADRA2BP18089 450 aa25.16■■□□□ 1.62
CIRBP-238ENST00000592412 BRCA1P38398 1863 aaKnown RBP25.16■■□□□ 1.62
CIRBP-238ENST00000592412 PLEKHO1Q53GL0 409 aaPredicted RBP25.16■■□□□ 1.62
CIRBP-238ENST00000592412 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
CIRBP-238ENST00000592412 HSPA5P11021 654 aaKnown RBP25.14■■□□□ 1.62
CIRBP-238ENST00000592412 IFFO2Q5TF58 517 aa25.14■■□□□ 1.62
CIRBP-238ENST00000592412 BCS1LQ9Y276 419 aa25.14■■□□□ 1.62
CIRBP-238ENST00000592412 TJP1Q07157 1748 aa25.13■■□□□ 1.61
CIRBP-238ENST00000592412 DPEP1P16444 411 aa25.13■■□□□ 1.61
CIRBP-238ENST00000592412 CABP4P57796 275 aa25.13■■□□□ 1.61
CIRBP-238ENST00000592412 AMOTQ4VCS5 1084 aa25.13■■□□□ 1.61
CIRBP-238ENST00000592412 PTCD1O75127 700 aaKnown RBP25.11■■□□□ 1.61
CIRBP-238ENST00000592412 KCNA3P22001 575 aa25.11■■□□□ 1.61
CIRBP-238ENST00000592412 RFC4P35249 363 aa25.11■■□□□ 1.61
CIRBP-238ENST00000592412 ADAMTS7Q9UKP4 1686 aa25.1■■□□□ 1.61
CIRBP-238ENST00000592412 MTHFSP49914 203 aa25.1■■□□□ 1.61
CIRBP-238ENST00000592412 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.61
CIRBP-238ENST00000592412 CCDC87Q9NVE4 849 aa25.1■■□□□ 1.61
CIRBP-238ENST00000592412 CRKLP46109 303 aaKnown RBP25.09■■□□□ 1.61
CIRBP-238ENST00000592412 NFATC2IPQ8NCF5 419 aa25.09■■□□□ 1.61
CIRBP-238ENST00000592412 SRP68Q9UHB9 627 aaKnown RBP25.09■■□□□ 1.61
CIRBP-238ENST00000592412 PARP3Q9Y6F1 533 aa25.08■■□□□ 1.61
CIRBP-238ENST00000592412 SCN11AQ9UI33 1791 aa25.08■■□□□ 1.6
CIRBP-238ENST00000592412 SULT6B1Q6IMI4 303 aa25.07■■□□□ 1.6
CIRBP-238ENST00000592412 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
CIRBP-238ENST00000592412 IL13P35225 146 aa25.06■■□□□ 1.6
CIRBP-238ENST00000592412 DDR1Q08345 913 aa25.06■■□□□ 1.6
CIRBP-238ENST00000592412 FKBP8Q14318 412 aa25.06■■□□□ 1.6
CIRBP-238ENST00000592412 C1orf141Q5JVX7 400 aa25.06■■□□□ 1.6
CIRBP-238ENST00000592412 ARHGAP27Q6ZUM4 889 aa25.06■■□□□ 1.6
CIRBP-238ENST00000592412 PCGF6Q9BYE7 350 aa25.06■■□□□ 1.6
CIRBP-238ENST00000592412 ARFGEF1Q9Y6D6 1849 aa25.06■■□□□ 1.6
CIRBP-238ENST00000592412 USP42Q9H9J4 1324 aaKnown RBP25.06■■□□□ 1.6
CIRBP-238ENST00000592412 FCHSD2O94868 740 aa25.05■■□□□ 1.6
CIRBP-238ENST00000592412 INTS5Q6P9B9 1019 aaKnown RBP25.03■■□□□ 1.6
CIRBP-238ENST00000592412 NMRK2Q9NPI5 230 aa25.03■■□□□ 1.6
CIRBP-238ENST00000592412 TOMM70O94826 608 aa25.01■■□□□ 1.59
CIRBP-238ENST00000592412 MRC1P22897 1456 aa25■■□□□ 1.59
CIRBP-238ENST00000592412 AMER1Q5JTC6 1135 aaPredicted RBP24.99■■□□□ 1.59
CIRBP-238ENST00000592412 C9orf131Q5VYM1 1079 aa24.99■■□□□ 1.59
CIRBP-238ENST00000592412 DNAJC10Q8IXB1 793 aa24.99■■□□□ 1.59
CIRBP-238ENST00000592412 LGR6Q9HBX8 967 aa24.99■■□□□ 1.59
CIRBP-238ENST00000592412 POLRMTO00411 1230 aaKnown RBP24.98■■□□□ 1.59
CIRBP-238ENST00000592412 TM4SF1P30408 202 aa24.98■■□□□ 1.59
CIRBP-238ENST00000592412 AKAP4Q5JQC9 854 aa24.98■■□□□ 1.59
CIRBP-238ENST00000592412 SLC52A2Q9HAB3 445 aa24.98■■□□□ 1.59
CIRBP-238ENST00000592412 PIM2Q9P1W9 311 aa24.98■■□□□ 1.59
CIRBP-238ENST00000592412 KCPQ6ZWJ8 1503 aa24.97■■□□□ 1.59
CIRBP-238ENST00000592412 CHRNA5P30532 468 aa24.97■■□□□ 1.59
CIRBP-238ENST00000592412 DNAJC5GQ8N7S2 189 aa24.97■■□□□ 1.59
CIRBP-238ENST00000592412 KNSTRNQ9Y448 316 aa24.97■■□□□ 1.59
CIRBP-238ENST00000592412 SOS1Q07889 1333 aaPredicted RBP24.96■■□□□ 1.59
CIRBP-238ENST00000592412 APLP1P51693 650 aa24.96■■□□□ 1.59
CIRBP-238ENST00000592412 DALRD3Q5D0E6 543 aaKnown RBP24.95■■□□□ 1.58
CIRBP-238ENST00000592412 USPL1Q5W0Q7 1092 aa24.95■■□□□ 1.58
CIRBP-238ENST00000592412 VIRMAQ69YN4 1812 aaKnown RBP24.95■■□□□ 1.58
CIRBP-238ENST00000592412 SLC39A6Q13433 755 aa24.94■■□□□ 1.58
CIRBP-238ENST00000592412 PCNTO95613 3336 aa24.94■■□□□ 1.58
CIRBP-238ENST00000592412 NRXN2Q9P2S2 1712 aa24.93■■□□□ 1.58
CIRBP-238ENST00000592412 RNMTO43148 476 aaKnown RBP24.93■■□□□ 1.58
CIRBP-238ENST00000592412 CYP19A1P11511 503 aaPredicted RBP24.93■■□□□ 1.58
CIRBP-238ENST00000592412 AFDNP55196 1824 aaKnown RBP24.93■■□□□ 1.58
CIRBP-238ENST00000592412 HMOX1P09601 288 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms