RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 CYP27B1O15528 508 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 INSRP06213 1382 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 ZNF831Q5JPB2 1677 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 KIF24Q5T7B8 1368 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 NLGN1Q8N2Q7 840 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 LINC00116Q8NCU8 138 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 PIGBQ92521 554 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 CARD11Q9BXL7 1154 aa14.28□□□□□ -0.12
SDF2-209ENST00000591903 SBF1O95248 1867 aa14.27□□□□□ -0.12
SDF2-209ENST00000591903 A0A0G2JLW4 131 aa14.27□□□□□ -0.13
SDF2-209ENST00000591903 FCHSD2O94868 740 aa14.27□□□□□ -0.13
SDF2-209ENST00000591903 HTRA3P83110 453 aa14.27□□□□□ -0.13
SDF2-209ENST00000591903 SMIM5Q71RC9 77 aa14.27□□□□□ -0.13
SDF2-209ENST00000591903 CCDC87Q9NVE4 849 aa14.27□□□□□ -0.13
SDF2-209ENST00000591903 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
SDF2-209ENST00000591903 FBLN1P23142 703 aa14.26□□□□□ -0.13
SDF2-209ENST00000591903 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
SDF2-209ENST00000591903 RRS1Q15050 365 aaKnown RBP14.26□□□□□ -0.13
SDF2-209ENST00000591903 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
SDF2-209ENST00000591903 C9orf131Q5VYM1 1079 aa14.26□□□□□ -0.13
SDF2-209ENST00000591903 SMC1BQ8NDV3 1235 aa14.26□□□□□ -0.13
SDF2-209ENST00000591903 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
SDF2-209ENST00000591903 KCPQ6ZWJ8 1503 aa14.25□□□□□ -0.13
SDF2-209ENST00000591903 FLT4P35916 1363 aa14.25□□□□□ -0.13
SDF2-209ENST00000591903 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
SDF2-209ENST00000591903 TMF1P82094 1093 aa14.25□□□□□ -0.13
SDF2-209ENST00000591903 DPEP1P16444 411 aa14.24□□□□□ -0.13
SDF2-209ENST00000591903 ADRA2BP18089 450 aa14.24□□□□□ -0.13
SDF2-209ENST00000591903 TRAPPC3LQ5T215 181 aa14.24□□□□□ -0.13
SDF2-209ENST00000591903 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
SDF2-209ENST00000591903 SPG7Q9UQ90 795 aa14.24□□□□□ -0.13
SDF2-209ENST00000591903 RTCBQ9Y3I0 505 aaKnown RBP14.24□□□□□ -0.13
SDF2-209ENST00000591903 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
SDF2-209ENST00000591903 ITPK1Q13572 414 aa14.23□□□□□ -0.13
SDF2-209ENST00000591903 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
SDF2-209ENST00000591903 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
SDF2-209ENST00000591903 ZC3H4Q9UPT8 1303 aaKnown RBP14.22□□□□□ -0.13
SDF2-209ENST00000591903 HSP90AB2PQ58FF8 381 aa14.22□□□□□ -0.13
SDF2-209ENST00000591903 PARP3Q9Y6F1 533 aa14.22□□□□□ -0.13
SDF2-209ENST00000591903 FYB1O15117 783 aa14.21□□□□□ -0.13
SDF2-209ENST00000591903 HSPA1AP0DMV8 641 aaKnown RBP14.21□□□□□ -0.13
SDF2-209ENST00000591903 HSPA1BP0DMV9 641 aaKnown RBP14.21□□□□□ -0.13
SDF2-209ENST00000591903 DCAF5Q96JK2 942 aa14.21□□□□□ -0.13
SDF2-209ENST00000591903 RRAGCQ9HB90 399 aa14.21□□□□□ -0.13
SDF2-209ENST00000591903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.13
SDF2-209ENST00000591903 RNF181Q9P0P0 153 aa14.21□□□□□ -0.13
SDF2-209ENST00000591903 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
SDF2-209ENST00000591903 KCNA3P22001 575 aa14.2□□□□□ -0.14
SDF2-209ENST00000591903 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
SDF2-209ENST00000591903 RC3H1Q5TC82 1133 aaKnown RBP14.2□□□□□ -0.14
SDF2-209ENST00000591903 ANKRD26Q9UPS8 1709 aa14.2□□□□□ -0.14
SDF2-209ENST00000591903 KDRP35968 1356 aa14.2□□□□□ -0.14
SDF2-209ENST00000591903 GYS1P13807 737 aa14.19□□□□□ -0.14
SDF2-209ENST00000591903 RFC4P35249 363 aa14.19□□□□□ -0.14
SDF2-209ENST00000591903 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
SDF2-209ENST00000591903 CNTNAP4Q9C0A0 1308 aa14.18□□□□□ -0.14
SDF2-209ENST00000591903 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
SDF2-209ENST00000591903 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
SDF2-209ENST00000591903 ATG3Q9NT62 314 aa14.18□□□□□ -0.14
SDF2-209ENST00000591903 MYH14Q7Z406 1995 aaKnown RBP14.17□□□□□ -0.14
SDF2-209ENST00000591903 CCDC88AQ3V6T2 1871 aa14.16□□□□□ -0.14
SDF2-209ENST00000591903 RPS6KA4O75676 772 aa14.16□□□□□ -0.14
SDF2-209ENST00000591903 VEGFAP15692 232 aaPredicted RBP14.16□□□□□ -0.14
SDF2-209ENST00000591903 TESK2Q96S53 571 aa14.16□□□□□ -0.14
SDF2-209ENST00000591903 TIAM2Q8IVF5 1701 aa14.15□□□□□ -0.14
SDF2-209ENST00000591903 PHKG2P15735 406 aa14.15□□□□□ -0.14
SDF2-209ENST00000591903 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
SDF2-209ENST00000591903 SLC34A2O95436 690 aa14.14□□□□□ -0.15
SDF2-209ENST00000591903 DLEC1Q9Y238 1755 aa14.14□□□□□ -0.15
SDF2-209ENST00000591903 GLTPD2A6NH11 291 aa14.13□□□□□ -0.15
SDF2-209ENST00000591903 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
SDF2-209ENST00000591903 ST20-MTHFSA0A0A6YYL1 179 aa14.12□□□□□ -0.15
SDF2-209ENST00000591903 ERVV-2B6SEH9 535 aa14.12□□□□□ -0.15
SDF2-209ENST00000591903 HSP90AB1P08238 724 aaKnown RBP14.11□□□□□ -0.15
SDF2-209ENST00000591903 LMNB1P20700 586 aa14.11□□□□□ -0.15
SDF2-209ENST00000591903 SLC4A9Q96Q91 983 aa14.11□□□□□ -0.15
SDF2-209ENST00000591903 EMILIN1Q9Y6C2 1016 aa14.11□□□□□ -0.15
SDF2-209ENST00000591903 DICER1Q9UPY3 1922 aaKnown RBP14.11□□□□□ -0.15
SDF2-209ENST00000591903 WASHC2AQ641Q2 1341 aa14.11□□□□□ -0.15
SDF2-209ENST00000591903 EYA1Q99502 592 aa14.1□□□□□ -0.15
SDF2-209ENST00000591903 AFDNP55196 1824 aaKnown RBP14.1□□□□□ -0.15
SDF2-209ENST00000591903 USP42Q9H9J4 1324 aaKnown RBP14.1□□□□□ -0.15
SDF2-209ENST00000591903 CHRNA5P30532 468 aa14.09□□□□□ -0.15
SDF2-209ENST00000591903 TJP1Q07157 1748 aa14.08□□□□□ -0.16
SDF2-209ENST00000591903 NRXN2Q9P2S2 1712 aa14.08□□□□□ -0.16
SDF2-209ENST00000591903 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.16
SDF2-209ENST00000591903 RASSF7Q02833 373 aa14.08□□□□□ -0.16
SDF2-209ENST00000591903 DDR1Q08345 913 aa14.08□□□□□ -0.16
SDF2-209ENST00000591903 FKBP8Q14318 412 aa14.08□□□□□ -0.16
SDF2-209ENST00000591903 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.16
SDF2-209ENST00000591903 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
SDF2-209ENST00000591903 ADAMTS7Q9UKP4 1686 aa14.07□□□□□ -0.16
SDF2-209ENST00000591903 POLRMTO00411 1230 aaKnown RBP14.07□□□□□ -0.16
SDF2-209ENST00000591903 CRKLP46109 303 aaKnown RBP14.07□□□□□ -0.16
SDF2-209ENST00000591903 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
SDF2-209ENST00000591903 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
SDF2-209ENST00000591903 SRP68Q9UHB9 627 aaKnown RBP14.06□□□□□ -0.16
SDF2-209ENST00000591903 TM4SF1P30408 202 aa14.05□□□□□ -0.16
SDF2-209ENST00000591903 CABP4P57796 275 aa14.05□□□□□ -0.16
SDF2-209ENST00000591903 ZPR1O75312 459 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms