RNA–Protein interactions for RNA: ENST00000590211.5

CAPNS1-210, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-210ENST00000590211 HSP90B1P14625 803 aaKnown RBP6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 SCNN1DP51172 638 aa6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 EPHA4P54764 986 aa6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 ERVK-9P63128 1117 aa6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 PSME1Q06323 249 aa6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 ABCC8Q09428 1581 aa6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 OSBPL3Q9H4L5 887 aa6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 HMGXB3Q12766 1538 aa6.29□□□□□ -1.4
CAPNS1-210ENST00000590211 RNF223E7ERA6 249 aa6.28□□□□□ -1.4
CAPNS1-210ENST00000590211 WASLO00401 505 aaPredicted RBP6.28□□□□□ -1.4
CAPNS1-210ENST00000590211 TRIM32Q13049 653 aa6.28□□□□□ -1.4
CAPNS1-210ENST00000590211 EAPPQ56P03 285 aaPredicted RBP6.28□□□□□ -1.4
CAPNS1-210ENST00000590211 SREK1Q8WXA9 508 aaKnown RBP6.28□□□□□ -1.4
CAPNS1-210ENST00000590211 COL26A1Q96A83 441 aa6.28□□□□□ -1.4
CAPNS1-210ENST00000590211 NPR3P17342 541 aa6.27□□□□□ -1.41
CAPNS1-210ENST00000590211 VARSP26640 1264 aaKnown RBP6.27□□□□□ -1.41
CAPNS1-210ENST00000590211 ZC3H6P61129 1189 aaKnown RBP6.27□□□□□ -1.41
CAPNS1-210ENST00000590211 RGL4Q8IZJ4 473 aa6.27□□□□□ -1.41
CAPNS1-210ENST00000590211 CDK15Q96Q40 435 aa6.27□□□□□ -1.41
CAPNS1-210ENST00000590211 PTCD1O75127 700 aaKnown RBP6.26□□□□□ -1.41
CAPNS1-210ENST00000590211 IGFBP4P22692 258 aa6.26□□□□□ -1.41
CAPNS1-210ENST00000590211 GRM5P41594 1212 aa6.26□□□□□ -1.41
CAPNS1-210ENST00000590211 WNT7BP56706 349 aa6.26□□□□□ -1.41
CAPNS1-210ENST00000590211 TSNAXIP1Q2TAA8 658 aa6.26□□□□□ -1.41
CAPNS1-210ENST00000590211 BACH2Q9BYV9 841 aa6.26□□□□□ -1.41
CAPNS1-210ENST00000590211 TMPRSS4Q9NRS4 437 aa6.26□□□□□ -1.41
CAPNS1-210ENST00000590211 PRDM2Q13029 1718 aa6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 LILRA1O75019 489 aa6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 ITGBL1O95965 494 aaPredicted RBP6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 RAB15P59190 212 aa6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 NAA30Q147X3 362 aaPredicted RBP6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 NAALADL2Q58DX5 795 aa6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 CC2D2BQ6DHV5 1058 aa6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 ANKLE1Q8NAG6 615 aa6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 EMID1Q96A84 441 aaPredicted RBP6.25□□□□□ -1.41
CAPNS1-210ENST00000590211 SIAH2O43255 324 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 FOXO3O43524 673 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 MYCP01106 439 aaPredicted RBP6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 P4HBP07237 508 aaKnown RBP6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 VASH1Q7L8A9 365 aaPredicted RBP6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 TMC7Q7Z402 723 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 TNS4Q8IZW8 715 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 MPNDQ8N594 471 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 HELQQ8TDG4 1101 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 SLC4A9Q96Q91 983 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 RBCK1Q9BYM8 510 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 ETNK1Q9HBU6 452 aa6.24□□□□□ -1.41
CAPNS1-210ENST00000590211 ATAD2Q6PL18 1390 aa6.23□□□□□ -1.41
CAPNS1-210ENST00000590211 INHAP05111 366 aa6.23□□□□□ -1.41
CAPNS1-210ENST00000590211 GDF10P55107 478 aa6.23□□□□□ -1.41
CAPNS1-210ENST00000590211 FOXK2Q01167 660 aa6.23□□□□□ -1.41
CAPNS1-210ENST00000590211 MRPL58Q14197 206 aaKnown RBP6.23□□□□□ -1.41
CAPNS1-210ENST00000590211 BCL11AQ9H165 835 aa6.23□□□□□ -1.41
CAPNS1-210ENST00000590211 EEA1Q15075 1411 aa6.23□□□□□ -1.41
CAPNS1-210ENST00000590211 NCAPD3P42695 1498 aa6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 A0A1W2PRU2 124 aa6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 FAM13AO94988 1023 aa6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 IGHA2P01877 340 aa6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 ERCC5P28715 1186 aaPredicted RBP6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 ADD1P35611 737 aaKnown RBP6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 RPIAP49247 311 aa6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 LDLRAD1Q5T700 205 aa6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 FAM9AQ8IZU1 332 aaPredicted RBP6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 ZNF784Q8NCA9 323 aaPredicted RBP6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 SCG3Q8WXD2 468 aaKnown RBP6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 SAP130Q9H0E3 1048 aa6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 TSPAN10Q9H1Z9 355 aaPredicted RBP6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 WRNQ14191 1432 aaPredicted RBP eCLIP6.22□□□□□ -1.41
CAPNS1-210ENST00000590211 ZBTB24O43167 697 aaPredicted RBP6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 MPSTP25325 297 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 HDLBPQ00341 1268 aaKnown RBP6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 KCNC4Q03721 635 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 MTFR1Q15390 333 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 RC3H1Q5TC82 1133 aaKnown RBP6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 POTEAQ6S8J7 498 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 UBXN4Q92575 508 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 CYLDQ9NQC7 956 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 PPP1R1BQ9UD71 204 aaPredicted RBP6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 HRH3Q9Y5N1 445 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 SYNJ1O43426 1573 aa6.21□□□□□ -1.42
CAPNS1-210ENST00000590211 TNFRSF10BO14763 440 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 SCAMP3O14828 347 aaKnown RBP6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 TREHO43280 583 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 FSHRP23945 695 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 FMR1Q06787 632 aaKnown RBP eCLIP6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 C9orf131Q5VYM1 1079 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 STAG2Q8N3U4 1231 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 KDF1Q8NAX2 398 aaPredicted RBP6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 USP3Q9Y6I4 520 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 TLL2Q9Y6L7 1015 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 BIVM-ERCC5R4GMW8 1640 aa6.2□□□□□ -1.42
CAPNS1-210ENST00000590211 BACH1O14867 736 aa6.19□□□□□ -1.42
CAPNS1-210ENST00000590211 NDUFB5O43674 189 aa6.19□□□□□ -1.42
CAPNS1-210ENST00000590211 NR3C2P08235 984 aa6.19□□□□□ -1.42
CAPNS1-210ENST00000590211 CDK11BP21127 795 aaKnown RBP6.19□□□□□ -1.42
CAPNS1-210ENST00000590211 DSC3Q14574 896 aa6.19□□□□□ -1.42
CAPNS1-210ENST00000590211 SF3A1Q15459 793 aaKnown RBP6.19□□□□□ -1.42
CAPNS1-210ENST00000590211 FAM26DQ5JW98 314 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms