RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TRIM27P14373 513 aa14.6□□□□□ -0.07
SMAD4-205ENST00000588745 ATF7IPQ6VMQ6 1270 aa14.6□□□□□ -0.07
SMAD4-205ENST00000588745 NUTM2AQ8IVF1 878 aaPredicted RBP14.6□□□□□ -0.07
SMAD4-205ENST00000588745 ZCRB1Q8TBF4 217 aaKnown RBP14.6□□□□□ -0.07
SMAD4-205ENST00000588745 DCAF5Q96JK2 942 aa14.6□□□□□ -0.07
SMAD4-205ENST00000588745 CCDC136Q96JN2 1154 aa14.6□□□□□ -0.07
SMAD4-205ENST00000588745 TNNQ9UQP3 1299 aa14.6□□□□□ -0.07
SMAD4-205ENST00000588745 BTBD11A6QL63 1104 aa14.6□□□□□ -0.07
SMAD4-205ENST00000588745 RLBP1P12271 317 aa14.6□□□□□ -0.07
SMAD4-205ENST00000588745 FTSJ3Q8IY81 847 aaKnown RBP14.6□□□□□ -0.07
SMAD4-205ENST00000588745 DZIP1LQ8IYY4 767 aaKnown RBP14.6□□□□□ -0.07
SMAD4-205ENST00000588745 SPATA31A6Q5VVP1 1343 aa14.59□□□□□ -0.07
SMAD4-205ENST00000588745 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
SMAD4-205ENST00000588745 SLC52A2Q9HAB3 445 aa14.59□□□□□ -0.07
SMAD4-205ENST00000588745 USP35Q9P2H5 1018 aa14.59□□□□□ -0.07
SMAD4-205ENST00000588745 COG6Q9Y2V7 657 aa14.59□□□□□ -0.07
SMAD4-205ENST00000588745 LRP6O75581 1613 aa14.58□□□□□ -0.08
SMAD4-205ENST00000588745 TCERG1O14776 1098 aaKnown RBP14.58□□□□□ -0.08
SMAD4-205ENST00000588745 EIF4A1P60842 406 aaKnown RBP14.58□□□□□ -0.08
SMAD4-205ENST00000588745 CLUAP1Q96AJ1 413 aa14.58□□□□□ -0.08
SMAD4-205ENST00000588745 TOGARAM1Q9Y4F4 1720 aa14.57□□□□□ -0.08
SMAD4-205ENST00000588745 TNS2Q63HR2 1409 aa14.57□□□□□ -0.08
SMAD4-205ENST00000588745 HOXB7P09629 217 aa14.57□□□□□ -0.08
SMAD4-205ENST00000588745 MVPQ14764 893 aaKnown RBP14.57□□□□□ -0.08
SMAD4-205ENST00000588745 PAPPAQ13219 1627 aa14.57□□□□□ -0.08
SMAD4-205ENST00000588745 NKX1-1Q15270 411 aaPredicted RBP14.56□□□□□ -0.08
SMAD4-205ENST00000588745 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
SMAD4-205ENST00000588745 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.56□□□□□ -0.08
SMAD4-205ENST00000588745 SPATA31A1Q5TZJ5 1347 aa14.55□□□□□ -0.08
SMAD4-205ENST00000588745 CACNA1FO60840 1977 aa14.55□□□□□ -0.08
SMAD4-205ENST00000588745 RGS12O14924 1447 aa14.55□□□□□ -0.08
SMAD4-205ENST00000588745 KCNQ3O43525 872 aa14.55□□□□□ -0.08
SMAD4-205ENST00000588745 AAMPQ13685 434 aa14.55□□□□□ -0.08
SMAD4-205ENST00000588745 API5Q9BZZ5 524 aaKnown RBP14.55□□□□□ -0.08
SMAD4-205ENST00000588745 THRAP3Q9Y2W1 955 aaKnown RBP14.55□□□□□ -0.08
SMAD4-205ENST00000588745 HEG1Q9ULI3 1381 aa14.55□□□□□ -0.08
SMAD4-205ENST00000588745 ABCC4O15439 1325 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 C5P01031 1676 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 GLI3P10071 1580 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 HSPA1LP34931 641 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 CCDC30Q5VVM6 783 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
SMAD4-205ENST00000588745 STK31Q9BXU1 1019 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 PTPRCP08575 1304 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 SPATA31A5Q5VU36 1347 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 SPATA31A7Q8IWB4 1347 aa14.54□□□□□ -0.08
SMAD4-205ENST00000588745 UBR2Q8IWV8 1755 aa14.53□□□□□ -0.08
SMAD4-205ENST00000588745 CABP4P57796 275 aa14.53□□□□□ -0.08
SMAD4-205ENST00000588745 HDGFL1Q5TGJ6 251 aa14.53□□□□□ -0.08
SMAD4-205ENST00000588745 TMEM57Q8N5G2 664 aa14.53□□□□□ -0.08
SMAD4-205ENST00000588745 NFATC2IPQ8NCF5 419 aa14.53□□□□□ -0.08
SMAD4-205ENST00000588745 DDX19BQ9UMR2 479 aa14.53□□□□□ -0.08
SMAD4-205ENST00000588745 BCL9LQ86UU0 1499 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 ERVV-2B6SEH9 535 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 SLC4A2P04920 1241 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 ZNF790Q6PG37 636 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 ITPRIPQ8IWB1 547 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 DDX54Q8TDD1 881 aaKnown RBP14.52□□□□□ -0.08
SMAD4-205ENST00000588745 C8orf37Q96NL8 207 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 CHMP4AQ9BY43 222 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 LAMB4A4D0S4 1761 aa14.52□□□□□ -0.08
SMAD4-205ENST00000588745 N4BP2Q86UW6 1770 aaPredicted RBP14.51□□□□□ -0.09
SMAD4-205ENST00000588745 UNC5CLQ8IV45 518 aa14.51□□□□□ -0.09
SMAD4-205ENST00000588745 GIGYF1O75420 1035 aaPredicted RBP14.5□□□□□ -0.09
SMAD4-205ENST00000588745 TTC5Q8N0Z6 440 aa14.5□□□□□ -0.09
SMAD4-205ENST00000588745 NGLY1Q96IV0 654 aa14.5□□□□□ -0.09
SMAD4-205ENST00000588745 DOT1LQ8TEK3 1739 aa14.5□□□□□ -0.09
SMAD4-205ENST00000588745 SLC39A6Q13433 755 aa14.49□□□□□ -0.09
SMAD4-205ENST00000588745 BARGINQ6ZT62 677 aa14.49□□□□□ -0.09
SMAD4-205ENST00000588745 G2E3Q7L622 706 aa14.49□□□□□ -0.09
SMAD4-205ENST00000588745 FNBP4Q8N3X1 1017 aaPredicted RBP14.49□□□□□ -0.09
SMAD4-205ENST00000588745 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
SMAD4-205ENST00000588745 KDM2BQ8NHM5 1336 aa14.49□□□□□ -0.09
SMAD4-205ENST00000588745 KCPQ6ZWJ8 1503 aa14.49□□□□□ -0.09
SMAD4-205ENST00000588745 ITGB4P16144 1822 aa14.49□□□□□ -0.09
SMAD4-205ENST00000588745 EXOC5O00471 708 aa14.48□□□□□ -0.09
SMAD4-205ENST00000588745 FLIIQ13045 1269 aa14.48□□□□□ -0.09
SMAD4-205ENST00000588745 VPS72Q15906 364 aa14.48□□□□□ -0.09
SMAD4-205ENST00000588745 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
SMAD4-205ENST00000588745 PXDNLA1KZ92 1463 aa14.48□□□□□ -0.09
SMAD4-205ENST00000588745 EIF2S2P20042 333 aaKnown RBP14.47□□□□□ -0.09
SMAD4-205ENST00000588745 CENPQQ7L2Z9 268 aaPredicted RBP14.47□□□□□ -0.09
SMAD4-205ENST00000588745 FMNL2Q96PY5 1086 aa14.47□□□□□ -0.09
SMAD4-205ENST00000588745 DDB1Q16531 1140 aa14.47□□□□□ -0.09
SMAD4-205ENST00000588745 INTS3Q68E01 1043 aaKnown RBP14.47□□□□□ -0.09
SMAD4-205ENST00000588745 ZNF496Q96IT1 587 aaPredicted RBP14.47□□□□□ -0.09
SMAD4-205ENST00000588745 CHMP4BQ9H444 224 aaKnown RBP14.47□□□□□ -0.09
SMAD4-205ENST00000588745 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
SMAD4-205ENST00000588745 PRAMEF22A3QJZ6 481 aa14.46□□□□□ -0.1
SMAD4-205ENST00000588745 MEX3CQ5U5Q3 659 aaKnown RBP14.46□□□□□ -0.1
SMAD4-205ENST00000588745 ZBTB40Q9NUA8 1239 aa14.46□□□□□ -0.1
SMAD4-205ENST00000588745 TMOD3Q9NYL9 352 aa14.46□□□□□ -0.1
SMAD4-205ENST00000588745 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.1
SMAD4-205ENST00000588745 USP21Q9UK80 565 aa14.46□□□□□ -0.1
SMAD4-205ENST00000588745 THSD7AQ9UPZ6 1657 aa14.46□□□□□ -0.1
SMAD4-205ENST00000588745 SNRPA1P09661 255 aaKnown RBP14.45□□□□□ -0.1
SMAD4-205ENST00000588745 FKBP5Q13451 457 aaPredicted RBP14.45□□□□□ -0.1
SMAD4-205ENST00000588745 PHAXQ9H814 394 aaKnown RBP14.44□□□□□ -0.1
SMAD4-205ENST00000588745 PCDHB15Q9Y5E8 787 aa14.44□□□□□ -0.1
SMAD4-205ENST00000588745 BCL9O00512 1426 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms