RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 EYA1Q99502 592 aa21.27■■□□□ 1
IFT20-216ENST00000588477 CDCA8Q53HL2 280 aa21.26■□□□□ 0.99
IFT20-216ENST00000588477 IFNL2Q8IZJ0 200 aa21.26■□□□□ 0.99
IFT20-216ENST00000588477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.26■□□□□ 0.99
IFT20-216ENST00000588477 COL5A3P25940 1745 aaPredicted RBP21.26■□□□□ 0.99
IFT20-216ENST00000588477 PHKG2P15735 406 aa21.25■□□□□ 0.99
IFT20-216ENST00000588477 ATG3Q9NT62 314 aa21.25■□□□□ 0.99
IFT20-216ENST00000588477 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
IFT20-216ENST00000588477 WASHC2AQ641Q2 1341 aa21.25■□□□□ 0.99
IFT20-216ENST00000588477 ARFGEF1Q9Y6D6 1849 aa21.25■□□□□ 0.99
IFT20-216ENST00000588477 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
IFT20-216ENST00000588477 A0A0G2JLW4 131 aa21.24■□□□□ 0.99
IFT20-216ENST00000588477 TGFB2P61812 414 aa21.24■□□□□ 0.99
IFT20-216ENST00000588477 MYH14Q7Z406 1995 aaKnown RBP21.24■□□□□ 0.99
IFT20-216ENST00000588477 C4AP0C0L4 1744 aa21.24■□□□□ 0.99
IFT20-216ENST00000588477 APLP1P51693 650 aa21.23■□□□□ 0.99
IFT20-216ENST00000588477 TRAPPC3LQ5T215 181 aa21.23■□□□□ 0.99
IFT20-216ENST00000588477 RTCBQ9Y3I0 505 aaKnown RBP21.23■□□□□ 0.99
IFT20-216ENST00000588477 TOMM70O94826 608 aa21.22■□□□□ 0.99
IFT20-216ENST00000588477 ARHGAP27Q6ZUM4 889 aa21.22■□□□□ 0.99
IFT20-216ENST00000588477 NLGN1Q8N2Q7 840 aa21.22■□□□□ 0.99
IFT20-216ENST00000588477 WDR90Q96KV7 1748 aa21.21■□□□□ 0.99
IFT20-216ENST00000588477 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
IFT20-216ENST00000588477 C10orf71Q711Q0 1435 aa21.2■□□□□ 0.98
IFT20-216ENST00000588477 ARHGEF1Q92888 912 aaKnown RBP21.19■□□□□ 0.98
IFT20-216ENST00000588477 SLC4A9Q96Q91 983 aa21.19■□□□□ 0.98
IFT20-216ENST00000588477 KDRP35968 1356 aa21.19■□□□□ 0.98
IFT20-216ENST00000588477 FCHSD2O94868 740 aa21.18■□□□□ 0.98
IFT20-216ENST00000588477 DPEP1P16444 411 aa21.18■□□□□ 0.98
IFT20-216ENST00000588477 DNAJC5GQ8N7S2 189 aa21.18■□□□□ 0.98
IFT20-216ENST00000588477 NMRK2Q9NPI5 230 aa21.18■□□□□ 0.98
IFT20-216ENST00000588477 CCDC87Q9NVE4 849 aa21.18■□□□□ 0.98
IFT20-216ENST00000588477 POLKQ9UBT6 870 aa21.18■□□□□ 0.98
IFT20-216ENST00000588477 SBF1O95248 1867 aa21.18■□□□□ 0.98
IFT20-216ENST00000588477 GYS1P13807 737 aa21.16■□□□□ 0.98
IFT20-216ENST00000588477 RFC4P35249 363 aa21.16■□□□□ 0.98
IFT20-216ENST00000588477 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
IFT20-216ENST00000588477 RC3H1Q5TC82 1133 aaKnown RBP21.16■□□□□ 0.98
IFT20-216ENST00000588477 PARP3Q9Y6F1 533 aa21.16■□□□□ 0.98
IFT20-216ENST00000588477 ERVV-2B6SEH9 535 aa21.15■□□□□ 0.98
IFT20-216ENST00000588477 ADRA2BP18089 450 aa21.15■□□□□ 0.98
IFT20-216ENST00000588477 RPS6KA4O75676 772 aa21.14■□□□□ 0.97
IFT20-216ENST00000588477 CNTNAP4Q9C0A0 1308 aa21.13■□□□□ 0.97
IFT20-216ENST00000588477 KCNA3P22001 575 aa21.13■□□□□ 0.97
IFT20-216ENST00000588477 TNNT2P45379 298 aaPredicted RBP21.13■□□□□ 0.97
IFT20-216ENST00000588477 C9orf131Q5VYM1 1079 aa21.12■□□□□ 0.97
IFT20-216ENST00000588477 DCAF5Q96JK2 942 aa21.12■□□□□ 0.97
IFT20-216ENST00000588477 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
IFT20-216ENST00000588477 C16orf71Q8IYS4 520 aaPredicted RBP21.11■□□□□ 0.97
IFT20-216ENST00000588477 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
IFT20-216ENST00000588477 CCDC88AQ3V6T2 1871 aa21.1■□□□□ 0.97
IFT20-216ENST00000588477 CABP4P57796 275 aa21.1■□□□□ 0.97
IFT20-216ENST00000588477 RBM46Q8TBY0 533 aaKnown RBP21.1■□□□□ 0.97
IFT20-216ENST00000588477 PIM2Q9P1W9 311 aa21.1■□□□□ 0.97
IFT20-216ENST00000588477 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
IFT20-216ENST00000588477 TJP1Q07157 1748 aa21.09■□□□□ 0.97
IFT20-216ENST00000588477 HTRA3P83110 453 aa21.09■□□□□ 0.97
IFT20-216ENST00000588477 PLEKHO1Q53GL0 409 aaPredicted RBP21.09■□□□□ 0.97
IFT20-216ENST00000588477 KDM6AO15550 1401 aaPredicted RBP21.09■□□□□ 0.97
IFT20-216ENST00000588477 TNRC6CQ9HCJ0 1690 aaKnown RBP21.09■□□□□ 0.97
IFT20-216ENST00000588477 PTCD1O75127 700 aaKnown RBP21.08■□□□□ 0.97
IFT20-216ENST00000588477 POLR3GLQ9BT43 218 aa21.08■□□□□ 0.97
IFT20-216ENST00000588477 KCPQ6ZWJ8 1503 aa21.08■□□□□ 0.96
IFT20-216ENST00000588477 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.96
IFT20-216ENST00000588477 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
IFT20-216ENST00000588477 ZNF530Q6P9A1 599 aaPredicted RBP21.07■□□□□ 0.96
IFT20-216ENST00000588477 SRP68Q9UHB9 627 aaKnown RBP21.07■□□□□ 0.96
IFT20-216ENST00000588477 CRKLP46109 303 aaKnown RBP21.06■□□□□ 0.96
IFT20-216ENST00000588477 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
IFT20-216ENST00000588477 KDM2BQ8NHM5 1336 aa21.05■□□□□ 0.96
IFT20-216ENST00000588477 FKBP8Q14318 412 aa21.05■□□□□ 0.96
IFT20-216ENST00000588477 KLRG1Q96E93 195 aa21.05■□□□□ 0.96
IFT20-216ENST00000588477 RRAGCQ9HB90 399 aa21.05■□□□□ 0.96
IFT20-216ENST00000588477 RNF181Q9P0P0 153 aa21.05■□□□□ 0.96
IFT20-216ENST00000588477 ADAMTS7Q9UKP4 1686 aa21.05■□□□□ 0.96
IFT20-216ENST00000588477 MTHFSP49914 203 aa21.04■□□□□ 0.96
IFT20-216ENST00000588477 FSTL1Q12841 308 aa21.04■□□□□ 0.96
IFT20-216ENST00000588477 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
IFT20-216ENST00000588477 NFATC2IPQ8NCF5 419 aa21.04■□□□□ 0.96
IFT20-216ENST00000588477 USP42Q9H9J4 1324 aaKnown RBP21.04■□□□□ 0.96
IFT20-216ENST00000588477 CHRNA5P30532 468 aa21.03■□□□□ 0.96
IFT20-216ENST00000588477 DDR1Q08345 913 aa21.03■□□□□ 0.96
IFT20-216ENST00000588477 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
IFT20-216ENST00000588477 COL13A1Q5TAT6 717 aaPredicted RBP21.01■□□□□ 0.95
IFT20-216ENST00000588477 AEBP1Q8IUX7 1158 aa21■□□□□ 0.95
IFT20-216ENST00000588477 JMYQ8N9B5 988 aa21■□□□□ 0.95
IFT20-216ENST00000588477 PCNTO95613 3336 aa21■□□□□ 0.95
IFT20-216ENST00000588477 DLEC1Q9Y238 1755 aa21■□□□□ 0.95
IFT20-216ENST00000588477 POLRMTO00411 1230 aaKnown RBP20.99■□□□□ 0.95
IFT20-216ENST00000588477 TM4SF1P30408 202 aa20.98■□□□□ 0.95
IFT20-216ENST00000588477 INTS5Q6P9B9 1019 aaKnown RBP20.98■□□□□ 0.95
IFT20-216ENST00000588477 TIAM2Q8IVF5 1701 aa20.96■□□□□ 0.95
IFT20-216ENST00000588477 NRXN2Q9P2S2 1712 aa20.96■□□□□ 0.95
IFT20-216ENST00000588477 ZPR1O75312 459 aa20.96■□□□□ 0.95
IFT20-216ENST00000588477 USPL1Q5W0Q7 1092 aa20.96■□□□□ 0.95
IFT20-216ENST00000588477 RASSF7Q02833 373 aa20.95■□□□□ 0.94
IFT20-216ENST00000588477 SULT6B1Q6IMI4 303 aa20.95■□□□□ 0.94
IFT20-216ENST00000588477 SMC1BQ8NDV3 1235 aa20.95■□□□□ 0.94
IFT20-216ENST00000588477 PANK3Q9H999 370 aa20.95■□□□□ 0.94
IFT20-216ENST00000588477 DNAJC10Q8IXB1 793 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 225.7 ms