RNA–Protein interactions for RNA: ENST00000587896.5

CIRBP-214, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-214ENST00000587896 ATP6V1AP38606 617 aa27.78■■■□□ 2.04
CIRBP-214ENST00000587896 SYT17Q9BSW7 474 aa27.78■■■□□ 2.04
CIRBP-214ENST00000587896 AKAP4Q5JQC9 854 aa27.77■■■□□ 2.04
CIRBP-214ENST00000587896 AMIGO3Q86WK7 504 aa27.77■■■□□ 2.04
CIRBP-214ENST00000587896 POLD1P28340 1107 aa27.76■■■□□ 2.03
CIRBP-214ENST00000587896 FLAD1Q8NFF5 587 aa27.76■■■□□ 2.03
CIRBP-214ENST00000587896 U2SURPO15042 1029 aaKnown RBP27.75■■■□□ 2.03
CIRBP-214ENST00000587896 SLC4A9Q96Q91 983 aa27.75■■■□□ 2.03
CIRBP-214ENST00000587896 SMIM5Q71RC9 77 aa27.74■■■□□ 2.03
CIRBP-214ENST00000587896 NFATC2IPQ8NCF5 419 aa27.74■■■□□ 2.03
CIRBP-214ENST00000587896 MAP3K5Q99683 1374 aa27.73■■■□□ 2.03
CIRBP-214ENST00000587896 MTHFSDQ2M296 383 aaKnown RBP27.73■■■□□ 2.03
CIRBP-214ENST00000587896 RBM42Q9BTD8 480 aaKnown RBP27.73■■■□□ 2.03
CIRBP-214ENST00000587896 UBR3Q6ZT12 1888 aa27.72■■■□□ 2.03
CIRBP-214ENST00000587896 PHF14O94880 888 aa27.72■■■□□ 2.03
CIRBP-214ENST00000587896 PPP2R1AP30153 589 aa27.72■■■□□ 2.03
CIRBP-214ENST00000587896 MSL1Q68DK7 614 aa27.72■■■□□ 2.03
CIRBP-214ENST00000587896 SCN11AQ9UI33 1791 aa27.72■■■□□ 2.03
CIRBP-214ENST00000587896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.71■■■□□ 2.03
CIRBP-214ENST00000587896 LGR6Q9HBX8 967 aa27.71■■■□□ 2.03
CIRBP-214ENST00000587896 ZNF831Q5JPB2 1677 aa27.71■■■□□ 2.03
CIRBP-214ENST00000587896 SSFA2P28290 1259 aa27.7■■■□□ 2.02
CIRBP-214ENST00000587896 CFAP53Q96M91 514 aa27.7■■■□□ 2.02
CIRBP-214ENST00000587896 DCAF8L1A6NGE4 600 aa27.69■■■□□ 2.02
CIRBP-214ENST00000587896 GNPATO15228 680 aa27.69■■■□□ 2.02
CIRBP-214ENST00000587896 MRC1P22897 1456 aa27.69■■■□□ 2.02
CIRBP-214ENST00000587896 RNMTO43148 476 aaKnown RBP27.68■■■□□ 2.02
CIRBP-214ENST00000587896 SLC52A2Q9HAB3 445 aa27.68■■■□□ 2.02
CIRBP-214ENST00000587896 KLHL34Q8N239 644 aa27.67■■■□□ 2.02
CIRBP-214ENST00000587896 ADAMTS7Q9UKP4 1686 aa27.67■■■□□ 2.02
CIRBP-214ENST00000587896 PTCD1O75127 700 aaKnown RBP27.66■■■□□ 2.02
CIRBP-214ENST00000587896 COL5A3P25940 1745 aaPredicted RBP27.65■■■□□ 2.02
CIRBP-214ENST00000587896 CNTNAP4Q9C0A0 1308 aa27.63■■■□□ 2.01
CIRBP-214ENST00000587896 RSPH6AQ9H0K4 717 aa27.62■■■□□ 2.01
CIRBP-214ENST00000587896 RC3H1Q5TC82 1133 aaKnown RBP27.61■■■□□ 2.01
CIRBP-214ENST00000587896 GAS2L2Q8NHY3 880 aa27.61■■■□□ 2.01
CIRBP-214ENST00000587896 NUDCQ9Y266 331 aa27.61■■■□□ 2.01
CIRBP-214ENST00000587896 RTCBQ9Y3I0 505 aaKnown RBP27.61■■■□□ 2.01
CIRBP-214ENST00000587896 CICQ96RK0 1608 aaPredicted RBP27.6■■■□□ 2.01
CIRBP-214ENST00000587896 PRKAR2BP31323 418 aa27.6■■■□□ 2.01
CIRBP-214ENST00000587896 TJP1Q07157 1748 aa27.6■■■□□ 2.01
CIRBP-214ENST00000587896 NLGN2Q8NFZ4 835 aa27.59■■■□□ 2.01
CIRBP-214ENST00000587896 PHACTR3Q96KR7 559 aa27.59■■■□□ 2.01
CIRBP-214ENST00000587896 VIRMAQ69YN4 1812 aaKnown RBP27.58■■■□□ 2.01
CIRBP-214ENST00000587896 SLC39A6Q13433 755 aa27.58■■■□□ 2.01
CIRBP-214ENST00000587896 GNAT3A8MTJ3 354 aa27.57■■■□□ 2
CIRBP-214ENST00000587896 U2AF1L5P0DN76 240 aaPredicted RBP27.57■■■□□ 2
CIRBP-214ENST00000587896 U2AF1Q01081 240 aaKnown RBP eCLIP27.57■■■□□ 2
CIRBP-214ENST00000587896 KCPQ6ZWJ8 1503 aa27.57■■■□□ 2
CIRBP-214ENST00000587896 RPS6KA4O75676 772 aa27.56■■■□□ 2
CIRBP-214ENST00000587896 TRAPPC3LQ5T215 181 aa27.56■■■□□ 2
CIRBP-214ENST00000587896 CRKLP46109 303 aaKnown RBP27.55■■■□□ 2
CIRBP-214ENST00000587896 IL17REQ8NFR9 667 aa27.55■■■□□ 2
CIRBP-214ENST00000587896 ADRA2BP18089 450 aa27.54■■■□□ 2
CIRBP-214ENST00000587896 YY1P25490 414 aa27.54■■■□□ 2
CIRBP-214ENST00000587896 ARHGEF1Q92888 912 aaKnown RBP27.54■■■□□ 2
CIRBP-214ENST00000587896 DNAJC10Q8IXB1 793 aa27.53■■■□□ 2
CIRBP-214ENST00000587896 MYH14Q7Z406 1995 aaKnown RBP27.53■■■□□ 2
CIRBP-214ENST00000587896 FCHSD2O94868 740 aa27.52■■■□□ 2
CIRBP-214ENST00000587896 TEFQ10587 303 aa27.51■■□□□ 1.99
CIRBP-214ENST00000587896 CD2APQ9Y5K6 639 aa27.51■■□□□ 1.99
CIRBP-214ENST00000587896 CEMIPQ8WUJ3 1361 aa27.5■■□□□ 1.99
CIRBP-214ENST00000587896 GPR162Q16538 588 aa27.5■■□□□ 1.99
CIRBP-214ENST00000587896 INTS5Q6P9B9 1019 aaKnown RBP27.5■■□□□ 1.99
CIRBP-214ENST00000587896 RFC4P35249 363 aa27.49■■□□□ 1.99
CIRBP-214ENST00000587896 DDX10Q13206 875 aaKnown RBP27.49■■□□□ 1.99
CIRBP-214ENST00000587896 UBR2Q8IWV8 1755 aa27.49■■□□□ 1.99
CIRBP-214ENST00000587896 C4AP0C0L4 1744 aa27.49■■□□□ 1.99
CIRBP-214ENST00000587896 PELP1Q8IZL8 1130 aaKnown RBP27.48■■□□□ 1.99
CIRBP-214ENST00000587896 MMP10P09238 476 aa27.47■■□□□ 1.99
CIRBP-214ENST00000587896 CYP19A1P11511 503 aaPredicted RBP27.47■■□□□ 1.99
CIRBP-214ENST00000587896 GYS1P13807 737 aa27.47■■□□□ 1.99
CIRBP-214ENST00000587896 CCDC87Q9NVE4 849 aa27.47■■□□□ 1.99
CIRBP-214ENST00000587896 SIPA1L3O60292 1781 aaPredicted RBP27.47■■□□□ 1.99
CIRBP-214ENST00000587896 TTC5Q8N0Z6 440 aa27.46■■□□□ 1.99
CIRBP-214ENST00000587896 VSIG10Q8N0Z9 540 aa27.46■■□□□ 1.99
CIRBP-214ENST00000587896 NLGN1Q8N2Q7 840 aa27.46■■□□□ 1.99
CIRBP-214ENST00000587896 ZNF790Q6PG37 636 aa27.44■■□□□ 1.98
CIRBP-214ENST00000587896 SRP68Q9UHB9 627 aaKnown RBP27.44■■□□□ 1.98
CIRBP-214ENST00000587896 UTRNP46939 3433 aa27.44■■□□□ 1.98
CIRBP-214ENST00000587896 USP42Q9H9J4 1324 aaKnown RBP27.43■■□□□ 1.98
CIRBP-214ENST00000587896 RALBP1Q15311 655 aa27.43■■□□□ 1.98
CIRBP-214ENST00000587896 ZNF496Q96IT1 587 aaPredicted RBP27.43■■□□□ 1.98
CIRBP-214ENST00000587896 SOS1Q07889 1333 aaPredicted RBP27.42■■□□□ 1.98
CIRBP-214ENST00000587896 YBX3P16989 372 aaKnown RBP eCLIP27.42■■□□□ 1.98
CIRBP-214ENST00000587896 ZBTB1Q9Y2K1 713 aa27.42■■□□□ 1.98
CIRBP-214ENST00000587896 MCM10Q7L590 875 aa27.41■■□□□ 1.98
CIRBP-214ENST00000587896 HEG1Q9ULI3 1381 aa27.4■■□□□ 1.98
CIRBP-214ENST00000587896 ZEB1P37275 1124 aaPredicted RBP27.4■■□□□ 1.98
CIRBP-214ENST00000587896 RTF1Q92541 710 aaKnown RBP27.4■■□□□ 1.98
CIRBP-214ENST00000587896 BTBD11A6QL63 1104 aa27.38■■□□□ 1.97
CIRBP-214ENST00000587896 DCTN1Q14203 1278 aa27.38■■□□□ 1.97
CIRBP-214ENST00000587896 PLEKHF1Q96S99 279 aa27.38■■□□□ 1.97
CIRBP-214ENST00000587896 COL15A1P39059 1388 aa27.37■■□□□ 1.97
CIRBP-214ENST00000587896 KCNQ3O43525 872 aa27.37■■□□□ 1.97
CIRBP-214ENST00000587896 FKBP8Q14318 412 aa27.37■■□□□ 1.97
CIRBP-214ENST00000587896 C10orf71Q711Q0 1435 aa27.36■■□□□ 1.97
CIRBP-214ENST00000587896 HTATSF1O43719 755 aaKnown RBP27.36■■□□□ 1.97
CIRBP-214ENST00000587896 FMNL2Q96PY5 1086 aa27.36■■□□□ 1.97
CIRBP-214ENST00000587896 STARD3NLO95772 234 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms