RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

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Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ATP6V1AP38606 617 aa31.41■■■□□ 2.62
LSM7-204ENST00000587502 CFAP53Q96M91 514 aa31.41■■■□□ 2.62
LSM7-204ENST00000587502 C4BP0C0L5 1744 aa31.41■■■□□ 2.62
LSM7-204ENST00000587502 SYT17Q9BSW7 474 aa31.4■■■□□ 2.62
LSM7-204ENST00000587502 MAP3K5Q99683 1374 aa31.38■■■□□ 2.61
LSM7-204ENST00000587502 COL3A1P02461 1466 aaPredicted RBP31.38■■■□□ 2.61
LSM7-204ENST00000587502 COL24A1Q17RW2 1714 aa31.38■■■□□ 2.61
LSM7-204ENST00000587502 U2SURPO15042 1029 aaKnown RBP31.37■■■□□ 2.61
LSM7-204ENST00000587502 LINC00116Q8NCU8 138 aa31.37■■■□□ 2.61
LSM7-204ENST00000587502 NFATC2IPQ8NCF5 419 aa31.36■■■□□ 2.61
LSM7-204ENST00000587502 SSFA2P28290 1259 aa31.35■■■□□ 2.61
LSM7-204ENST00000587502 ITPK1Q13572 414 aa31.35■■■□□ 2.61
LSM7-204ENST00000587502 RBM42Q9BTD8 480 aaKnown RBP31.35■■■□□ 2.61
LSM7-204ENST00000587502 NUDCQ9Y266 331 aa31.33■■■□□ 2.61
LSM7-204ENST00000587502 ZNF831Q5JPB2 1677 aa31.32■■■□□ 2.6
LSM7-204ENST00000587502 MTHFSDQ2M296 383 aaKnown RBP31.32■■■□□ 2.6
LSM7-204ENST00000587502 SCN11AQ9UI33 1791 aa31.31■■■□□ 2.6
LSM7-204ENST00000587502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.31■■■□□ 2.6
LSM7-204ENST00000587502 PPP2R1AP30153 589 aa31.31■■■□□ 2.6
LSM7-204ENST00000587502 PHF14O94880 888 aa31.3■■■□□ 2.6
LSM7-204ENST00000587502 SLC52A2Q9HAB3 445 aa31.3■■■□□ 2.6
LSM7-204ENST00000587502 UBR3Q6ZT12 1888 aa31.29■■■□□ 2.6
LSM7-204ENST00000587502 GNPATO15228 680 aa31.29■■■□□ 2.6
LSM7-204ENST00000587502 RNMTO43148 476 aaKnown RBP31.29■■■□□ 2.6
LSM7-204ENST00000587502 RC3H1Q5TC82 1133 aaKnown RBP31.28■■■□□ 2.6
LSM7-204ENST00000587502 GAS2L2Q8NHY3 880 aa31.28■■■□□ 2.6
LSM7-204ENST00000587502 SLC4A9Q96Q91 983 aa31.28■■■□□ 2.6
LSM7-204ENST00000587502 LGR6Q9HBX8 967 aa31.27■■■□□ 2.6
LSM7-204ENST00000587502 MSL1Q68DK7 614 aa31.26■■■□□ 2.59
LSM7-204ENST00000587502 AMIGO3Q86WK7 504 aa31.26■■■□□ 2.59
LSM7-204ENST00000587502 PTCD1O75127 700 aaKnown RBP31.25■■■□□ 2.59
LSM7-204ENST00000587502 KLHL34Q8N239 644 aa31.25■■■□□ 2.59
LSM7-204ENST00000587502 RTCBQ9Y3I0 505 aaKnown RBP31.25■■■□□ 2.59
LSM7-204ENST00000587502 CNTNAP4Q9C0A0 1308 aa31.24■■■□□ 2.59
LSM7-204ENST00000587502 ADRA2BP18089 450 aa31.23■■■□□ 2.59
LSM7-204ENST00000587502 MRC1P22897 1456 aa31.22■■■□□ 2.59
LSM7-204ENST00000587502 TRAPPC3LQ5T215 181 aa31.22■■■□□ 2.59
LSM7-204ENST00000587502 GNAT3A8MTJ3 354 aa31.2■■■□□ 2.59
LSM7-204ENST00000587502 U2AF1L5P0DN76 240 aaPredicted RBP31.19■■■□□ 2.58
LSM7-204ENST00000587502 YY1P25490 414 aa31.19■■■□□ 2.58
LSM7-204ENST00000587502 U2AF1Q01081 240 aaKnown RBP eCLIP31.19■■■□□ 2.58
LSM7-204ENST00000587502 SMIM5Q71RC9 77 aa31.19■■■□□ 2.58
LSM7-204ENST00000587502 RSPH6AQ9H0K4 717 aa31.19■■■□□ 2.58
LSM7-204ENST00000587502 ADAMTS7Q9UKP4 1686 aa31.19■■■□□ 2.58
LSM7-204ENST00000587502 COL5A3P25940 1745 aaPredicted RBP31.18■■■□□ 2.58
LSM7-204ENST00000587502 RPS6KA4O75676 772 aa31.18■■■□□ 2.58
LSM7-204ENST00000587502 PRKAR2BP31323 418 aa31.18■■■□□ 2.58
LSM7-204ENST00000587502 FCHSD2O94868 740 aa31.17■■■□□ 2.58
LSM7-204ENST00000587502 CD2APQ9Y5K6 639 aa31.17■■■□□ 2.58
LSM7-204ENST00000587502 VIRMAQ69YN4 1812 aaKnown RBP31.16■■■□□ 2.58
LSM7-204ENST00000587502 CICQ96RK0 1608 aaPredicted RBP31.14■■■□□ 2.58
LSM7-204ENST00000587502 CRKLP46109 303 aaKnown RBP31.14■■■□□ 2.58
LSM7-204ENST00000587502 TEFQ10587 303 aa31.14■■■□□ 2.58
LSM7-204ENST00000587502 GPR162Q16538 588 aa31.14■■■□□ 2.58
LSM7-204ENST00000587502 RFC4P35249 363 aa31.13■■■□□ 2.57
LSM7-204ENST00000587502 SLC39A6Q13433 755 aa31.13■■■□□ 2.57
LSM7-204ENST00000587502 ARHGEF1Q92888 912 aaKnown RBP31.13■■■□□ 2.57
LSM7-204ENST00000587502 PHACTR3Q96KR7 559 aa31.13■■■□□ 2.57
LSM7-204ENST00000587502 VSIG10Q8N0Z9 540 aa31.12■■■□□ 2.57
LSM7-204ENST00000587502 NLGN1Q8N2Q7 840 aa31.12■■■□□ 2.57
LSM7-204ENST00000587502 TTC5Q8N0Z6 440 aa31.11■■■□□ 2.57
LSM7-204ENST00000587502 IL17REQ8NFR9 667 aa31.11■■■□□ 2.57
LSM7-204ENST00000587502 NLGN2Q8NFZ4 835 aa31.11■■■□□ 2.57
LSM7-204ENST00000587502 MYH14Q7Z406 1995 aaKnown RBP31.1■■■□□ 2.57
LSM7-204ENST00000587502 UTRNP46939 3433 aa31.1■■■□□ 2.57
LSM7-204ENST00000587502 RALBP1Q15311 655 aa31.09■■■□□ 2.57
LSM7-204ENST00000587502 TJP1Q07157 1748 aa31.08■■■□□ 2.57
LSM7-204ENST00000587502 DNAJC10Q8IXB1 793 aa31.08■■■□□ 2.57
LSM7-204ENST00000587502 NEFMP07197 916 aa31.07■■■□□ 2.56
LSM7-204ENST00000587502 CEMIPQ8WUJ3 1361 aa31.06■■■□□ 2.56
LSM7-204ENST00000587502 INTS5Q6P9B9 1019 aaKnown RBP31.06■■■□□ 2.56
LSM7-204ENST00000587502 RTF1Q92541 710 aaKnown RBP31.06■■■□□ 2.56
LSM7-204ENST00000587502 CCDC87Q9NVE4 849 aa31.06■■■□□ 2.56
LSM7-204ENST00000587502 KCPQ6ZWJ8 1503 aa31.06■■■□□ 2.56
LSM7-204ENST00000587502 MMP10P09238 476 aa31.05■■■□□ 2.56
LSM7-204ENST00000587502 DDX10Q13206 875 aaKnown RBP31.05■■■□□ 2.56
LSM7-204ENST00000587502 PELP1Q8IZL8 1130 aaKnown RBP31.05■■■□□ 2.56
LSM7-204ENST00000587502 CYP19A1P11511 503 aaPredicted RBP31.04■■■□□ 2.56
LSM7-204ENST00000587502 GYS1P13807 737 aa31.04■■■□□ 2.56
LSM7-204ENST00000587502 ZNF790Q6PG37 636 aa31.04■■■□□ 2.56
LSM7-204ENST00000587502 HTATSF1O43719 755 aaKnown RBP31.03■■■□□ 2.56
LSM7-204ENST00000587502 PNNQ9H307 717 aaKnown RBP31.03■■■□□ 2.56
LSM7-204ENST00000587502 GRIN3BO60391 1043 aa31.02■■■□□ 2.56
LSM7-204ENST00000587502 TEX13AQ9BXU3 409 aaPredicted RBP31.02■■■□□ 2.56
LSM7-204ENST00000587502 STARD3NLO95772 234 aa31.01■■■□□ 2.55
LSM7-204ENST00000587502 GOLGB1Q14789 3259 aaKnown RBP31■■■□□ 2.55
LSM7-204ENST00000587502 UBR2Q8IWV8 1755 aa31■■■□□ 2.55
LSM7-204ENST00000587502 USP42Q9H9J4 1324 aaKnown RBP30.99■■■□□ 2.55
LSM7-204ENST00000587502 BTBD11A6QL63 1104 aa30.99■■■□□ 2.55
LSM7-204ENST00000587502 SIPA1L3O60292 1781 aaPredicted RBP30.99■■■□□ 2.55
LSM7-204ENST00000587502 SOS1Q07889 1333 aaPredicted RBP30.98■■■□□ 2.55
LSM7-204ENST00000587502 CHD4Q14839 1912 aa30.98■■■□□ 2.55
LSM7-204ENST00000587502 ZPR1O75312 459 aa30.98■■■□□ 2.55
LSM7-204ENST00000587502 ZNF496Q96IT1 587 aaPredicted RBP30.98■■■□□ 2.55
LSM7-204ENST00000587502 FMNL2Q96PY5 1086 aa30.98■■■□□ 2.55
LSM7-204ENST00000587502 PARP3Q9Y6F1 533 aa30.98■■■□□ 2.55
LSM7-204ENST00000587502 C4AP0C0L4 1744 aa30.98■■■□□ 2.55
LSM7-204ENST00000587502 HEG1Q9ULI3 1381 aa30.97■■■□□ 2.55
LSM7-204ENST00000587502 MCM10Q7L590 875 aa30.94■■■□□ 2.54
LSM7-204ENST00000587502 SRP68Q9UHB9 627 aaKnown RBP30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms