RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 N4BP2Q86UW6 1770 aaPredicted RBP25.16■■□□□ 1.62
CXXC1-210ENST00000587396 TMF1P82094 1093 aa25.16■■□□□ 1.62
CXXC1-210ENST00000587396 PKD1L3Q7Z443 1732 aa25.16■■□□□ 1.62
CXXC1-210ENST00000587396 TRAPPC3LQ5T215 181 aa25.15■■□□□ 1.62
CXXC1-210ENST00000587396 PHKG2P15735 406 aa25.14■■□□□ 1.62
CXXC1-210ENST00000587396 COL13A1Q5TAT6 717 aaPredicted RBP25.14■■□□□ 1.62
CXXC1-210ENST00000587396 C9orf131Q5VYM1 1079 aa25.14■■□□□ 1.62
CXXC1-210ENST00000587396 EYA1Q99502 592 aa25.14■■□□□ 1.62
CXXC1-210ENST00000587396 CARD14Q9BXL6 1004 aa25.14■■□□□ 1.62
CXXC1-210ENST00000587396 RTCBQ9Y3I0 505 aaKnown RBP25.14■■□□□ 1.62
CXXC1-210ENST00000587396 KIF24Q5T7B8 1368 aa25.14■■□□□ 1.61
CXXC1-210ENST00000587396 KIAA1551Q9HCM1 1747 aa25.13■■□□□ 1.61
CXXC1-210ENST00000587396 SLC24A1O60721 1099 aa25.13■■□□□ 1.61
CXXC1-210ENST00000587396 ARHGEF1Q92888 912 aaKnown RBP25.13■■□□□ 1.61
CXXC1-210ENST00000587396 SLC4A9Q96Q91 983 aa25.13■■□□□ 1.61
CXXC1-210ENST00000587396 C10orf71Q711Q0 1435 aa25.12■■□□□ 1.61
CXXC1-210ENST00000587396 CAPN15O75808 1086 aa25.12■■□□□ 1.61
CXXC1-210ENST00000587396 NLGN1Q8N2Q7 840 aa25.12■■□□□ 1.61
CXXC1-210ENST00000587396 RBM42Q9BTD8 480 aaKnown RBP25.12■■□□□ 1.61
CXXC1-210ENST00000587396 NCAPD2Q15021 1401 aa25.12■■□□□ 1.61
CXXC1-210ENST00000587396 IFNL2Q8IZJ0 200 aa25.11■■□□□ 1.61
CXXC1-210ENST00000587396 CCDC87Q9NVE4 849 aa25.11■■□□□ 1.61
CXXC1-210ENST00000587396 GYS1P13807 737 aa25.1■■□□□ 1.61
CXXC1-210ENST00000587396 C16orf71Q8IYS4 520 aaPredicted RBP25.1■■□□□ 1.61
CXXC1-210ENST00000587396 RBM46Q8TBY0 533 aaKnown RBP25.1■■□□□ 1.61
CXXC1-210ENST00000587396 KCNA3P22001 575 aa25.09■■□□□ 1.61
CXXC1-210ENST00000587396 KLRG1Q96E93 195 aa25.09■■□□□ 1.61
CXXC1-210ENST00000587396 KIF20BQ96Q89 1820 aa25.09■■□□□ 1.61
CXXC1-210ENST00000587396 KIF13BQ9NQT8 1826 aa25.08■■□□□ 1.61
CXXC1-210ENST00000587396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.08■■□□□ 1.61
CXXC1-210ENST00000587396 PARP3Q9Y6F1 533 aa25.08■■□□□ 1.61
CXXC1-210ENST00000587396 RFC4P35249 363 aa25.07■■□□□ 1.6
CXXC1-210ENST00000587396 WASHC2AQ641Q2 1341 aa25.07■■□□□ 1.6
CXXC1-210ENST00000587396 KDRP35968 1356 aa25.06■■□□□ 1.6
CXXC1-210ENST00000587396 RRAGCQ9HB90 399 aa25.05■■□□□ 1.6
CXXC1-210ENST00000587396 WDR90Q96KV7 1748 aa25.05■■□□□ 1.6
CXXC1-210ENST00000587396 KCPQ6ZWJ8 1503 aa25.05■■□□□ 1.6
CXXC1-210ENST00000587396 RPS6KA4O75676 772 aa25.03■■□□□ 1.6
CXXC1-210ENST00000587396 RC3H1Q5TC82 1133 aaKnown RBP25.03■■□□□ 1.6
CXXC1-210ENST00000587396 JMYQ8N9B5 988 aa25.03■■□□□ 1.6
CXXC1-210ENST00000587396 RNF181Q9P0P0 153 aa25.03■■□□□ 1.6
CXXC1-210ENST00000587396 SRP68Q9UHB9 627 aaKnown RBP25.03■■□□□ 1.6
CXXC1-210ENST00000587396 PIM2Q9P1W9 311 aa25.02■■□□□ 1.6
CXXC1-210ENST00000587396 POLKQ9UBT6 870 aa25.02■■□□□ 1.6
CXXC1-210ENST00000587396 C4AP0C0L4 1744 aa25.02■■□□□ 1.6
CXXC1-210ENST00000587396 ADRA2BP18089 450 aa25.01■■□□□ 1.59
CXXC1-210ENST00000587396 TNNT2P45379 298 aaPredicted RBP25.01■■□□□ 1.59
CXXC1-210ENST00000587396 FSTL1Q12841 308 aa25.01■■□□□ 1.59
CXXC1-210ENST00000587396 CHRNA5P30532 468 aa25■■□□□ 1.59
CXXC1-210ENST00000587396 EIF4A2Q14240 407 aaKnown RBP25■■□□□ 1.59
CXXC1-210ENST00000587396 DALRD3Q5D0E6 543 aaKnown RBP25■■□□□ 1.59
CXXC1-210ENST00000587396 DCAF5Q96JK2 942 aa25■■□□□ 1.59
CXXC1-210ENST00000587396 CNTNAP4Q9C0A0 1308 aa25■■□□□ 1.59
CXXC1-210ENST00000587396 PTCD1O75127 700 aaKnown RBP24.99■■□□□ 1.59
CXXC1-210ENST00000587396 FKBP8Q14318 412 aa24.99■■□□□ 1.59
CXXC1-210ENST00000587396 KDM2BQ8NHM5 1336 aa24.99■■□□□ 1.59
CXXC1-210ENST00000587396 PLEKHG2Q9H7P9 1386 aa24.99■■□□□ 1.59
CXXC1-210ENST00000587396 ERVV-2B6SEH9 535 aa24.98■■□□□ 1.59
CXXC1-210ENST00000587396 DDR1Q08345 913 aa24.98■■□□□ 1.59
CXXC1-210ENST00000587396 CDCA8Q53HL2 280 aa24.98■■□□□ 1.59
CXXC1-210ENST00000587396 TNS4Q8IZW8 715 aa24.98■■□□□ 1.59
CXXC1-210ENST00000587396 PCNTO95613 3336 aa24.96■■□□□ 1.59
CXXC1-210ENST00000587396 BRCA1P38398 1863 aaKnown RBP24.96■■□□□ 1.59
CXXC1-210ENST00000587396 CABP4P57796 275 aa24.96■■□□□ 1.59
CXXC1-210ENST00000587396 CRKLP46109 303 aaKnown RBP24.95■■□□□ 1.58
CXXC1-210ENST00000587396 RASSF7Q02833 373 aa24.94■■□□□ 1.58
CXXC1-210ENST00000587396 ANKRD26Q9UPS8 1709 aa24.93■■□□□ 1.58
CXXC1-210ENST00000587396 ZNF530Q6P9A1 599 aaPredicted RBP24.93■■□□□ 1.58
CXXC1-210ENST00000587396 KDM6AO15550 1401 aaPredicted RBP24.93■■□□□ 1.58
CXXC1-210ENST00000587396 MYH14Q7Z406 1995 aaKnown RBP24.92■■□□□ 1.58
CXXC1-210ENST00000587396 COL5A3P25940 1745 aaPredicted RBP24.92■■□□□ 1.58
CXXC1-210ENST00000587396 USP42Q9H9J4 1324 aaKnown RBP24.91■■□□□ 1.58
CXXC1-210ENST00000587396 HSP90AB1P08238 724 aaKnown RBP24.91■■□□□ 1.58
CXXC1-210ENST00000587396 SMC1BQ8NDV3 1235 aa24.91■■□□□ 1.58
CXXC1-210ENST00000587396 ARFGEF1Q9Y6D6 1849 aa24.91■■□□□ 1.58
CXXC1-210ENST00000587396 PLEKHO1Q53GL0 409 aaPredicted RBP24.9■■□□□ 1.58
CXXC1-210ENST00000587396 POLRMTO00411 1230 aaKnown RBP24.89■■□□□ 1.58
CXXC1-210ENST00000587396 MTHFSP49914 203 aa24.88■■□□□ 1.57
CXXC1-210ENST00000587396 PRELPP51888 382 aa24.88■■□□□ 1.57
CXXC1-210ENST00000587396 NFATC2IPQ8NCF5 419 aa24.88■■□□□ 1.57
CXXC1-210ENST00000587396 POLR3GLQ9BT43 218 aa24.88■■□□□ 1.57
CXXC1-210ENST00000587396 ZNF831Q5JPB2 1677 aa24.87■■□□□ 1.57
CXXC1-210ENST00000587396 HSPA1AP0DMV8 641 aaKnown RBP24.86■■□□□ 1.57
CXXC1-210ENST00000587396 HSPA1BP0DMV9 641 aaKnown RBP24.86■■□□□ 1.57
CXXC1-210ENST00000587396 INTS5Q6P9B9 1019 aaKnown RBP24.86■■□□□ 1.57
CXXC1-210ENST00000587396 TM4SF1P30408 202 aa24.85■■□□□ 1.57
CXXC1-210ENST00000587396 AEBP1Q8IUX7 1158 aa24.85■■□□□ 1.57
CXXC1-210ENST00000587396 USPL1Q5W0Q7 1092 aa24.84■■□□□ 1.57
CXXC1-210ENST00000587396 ZPR1O75312 459 aa24.82■■□□□ 1.56
CXXC1-210ENST00000587396 AMOTQ4VCS5 1084 aa24.82■■□□□ 1.56
CXXC1-210ENST00000587396 C1orf141Q5JVX7 400 aa24.82■■□□□ 1.56
CXXC1-210ENST00000587396 TNRC6CQ9HCJ0 1690 aaKnown RBP24.81■■□□□ 1.56
CXXC1-210ENST00000587396 SBF1O95248 1867 aa24.81■■□□□ 1.56
CXXC1-210ENST00000587396 VEGFAP15692 232 aaPredicted RBP24.81■■□□□ 1.56
CXXC1-210ENST00000587396 DNAJC10Q8IXB1 793 aa24.81■■□□□ 1.56
CXXC1-210ENST00000587396 GLTPD2A6NH11 291 aa24.8■■□□□ 1.56
CXXC1-210ENST00000587396 LMNB1P20700 586 aa24.8■■□□□ 1.56
CXXC1-210ENST00000587396 NFIXQ14938 502 aa24.79■■□□□ 1.56
CXXC1-210ENST00000587396 TJP1Q07157 1748 aa24.78■■□□□ 1.56
CXXC1-210ENST00000587396 SOS1Q07889 1333 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms