RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 TMF1P82094 1093 aa18.28■□□□□ 0.52
SMARCA4-211ENST00000586921 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
SMARCA4-211ENST00000586921 SBNO2Q9Y2G9 1366 aa18.28■□□□□ 0.52
SMARCA4-211ENST00000586921 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
SMARCA4-211ENST00000586921 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
SMARCA4-211ENST00000586921 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
SMARCA4-211ENST00000586921 SIK1P57059 783 aa18.27■□□□□ 0.52
SMARCA4-211ENST00000586921 RAPGEF4Q8WZA2 1011 aa18.26■□□□□ 0.51
SMARCA4-211ENST00000586921 PARP3Q9Y6F1 533 aa18.26■□□□□ 0.51
SMARCA4-211ENST00000586921 ITGB4P16144 1822 aa18.26■□□□□ 0.51
SMARCA4-211ENST00000586921 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
SMARCA4-211ENST00000586921 RASSF7Q02833 373 aa18.24■□□□□ 0.51
SMARCA4-211ENST00000586921 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-211ENST00000586921 PDE4DIPQ5VU43 2346 aa18.23■□□□□ 0.51
SMARCA4-211ENST00000586921 HOXC9P31274 260 aa18.23■□□□□ 0.51
SMARCA4-211ENST00000586921 PIGBQ92521 554 aa18.23■□□□□ 0.51
SMARCA4-211ENST00000586921 WBP1LQ9NX94 342 aa18.23■□□□□ 0.51
SMARCA4-211ENST00000586921 LMNB1P20700 586 aa18.22■□□□□ 0.51
SMARCA4-211ENST00000586921 AMPHP49418 695 aa18.22■□□□□ 0.51
SMARCA4-211ENST00000586921 ITPK1Q13572 414 aa18.22■□□□□ 0.51
SMARCA4-211ENST00000586921 TRAPPC3LQ5T215 181 aa18.22■□□□□ 0.51
SMARCA4-211ENST00000586921 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
SMARCA4-211ENST00000586921 CD163L1Q9NR16 1453 aa18.21■□□□□ 0.51
SMARCA4-211ENST00000586921 RAB3GAP2Q9H2M9 1393 aa18.21■□□□□ 0.51
SMARCA4-211ENST00000586921 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
SMARCA4-211ENST00000586921 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-211ENST00000586921 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
SMARCA4-211ENST00000586921 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
SMARCA4-211ENST00000586921 HSPA8P11142 646 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-211ENST00000586921 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
SMARCA4-211ENST00000586921 VEGFBP49765 207 aa18.2■□□□□ 0.5
SMARCA4-211ENST00000586921 NBPF6Q5VWK0 638 aa18.2■□□□□ 0.5
SMARCA4-211ENST00000586921 NBPF4Q96M43 638 aa18.2■□□□□ 0.5
SMARCA4-211ENST00000586921 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-211ENST00000586921 GYS1P13807 737 aa18.19■□□□□ 0.5
SMARCA4-211ENST00000586921 CHRNA5P30532 468 aa18.19■□□□□ 0.5
SMARCA4-211ENST00000586921 CHADLQ6NUI6 762 aa18.19■□□□□ 0.5
SMARCA4-211ENST00000586921 POTECB2RU33 542 aa18.18■□□□□ 0.5
SMARCA4-211ENST00000586921 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
SMARCA4-211ENST00000586921 CYP27B1O15528 508 aa18.17■□□□□ 0.5
SMARCA4-211ENST00000586921 TNRC18O15417 2968 aaPredicted RBP18.17■□□□□ 0.5
SMARCA4-211ENST00000586921 ADRA2BP18089 450 aa18.16■□□□□ 0.5
SMARCA4-211ENST00000586921 RFC4P35249 363 aa18.16■□□□□ 0.5
SMARCA4-211ENST00000586921 DPY19L2Q6NUT2 758 aa18.16■□□□□ 0.5
SMARCA4-211ENST00000586921 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
SMARCA4-211ENST00000586921 VIRMAQ69YN4 1812 aaKnown RBP18.16■□□□□ 0.5
SMARCA4-211ENST00000586921 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
SMARCA4-211ENST00000586921 CFAP44Q96MT7 982 aa18.15■□□□□ 0.5
SMARCA4-211ENST00000586921 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
SMARCA4-211ENST00000586921 ASAP1Q9ULH1 1129 aa18.14■□□□□ 0.49
SMARCA4-211ENST00000586921 RTL1A6NKG5 1358 aa18.14■□□□□ 0.49
SMARCA4-211ENST00000586921 TMOD3Q9NYL9 352 aa18.13■□□□□ 0.49
SMARCA4-211ENST00000586921 MAP2K1Q02750 393 aaPredicted RBP18.12■□□□□ 0.49
SMARCA4-211ENST00000586921 PASKQ96RG2 1323 aa18.12■□□□□ 0.49
SMARCA4-211ENST00000586921 CCDC88AQ3V6T2 1871 aa18.12■□□□□ 0.49
SMARCA4-211ENST00000586921 TMEM88BA6NKF7 163 aa18.11■□□□□ 0.49
SMARCA4-211ENST00000586921 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
SMARCA4-211ENST00000586921 POTEJP0CG39 1038 aa18.11■□□□□ 0.49
SMARCA4-211ENST00000586921 FBLN1P23142 703 aa18.11■□□□□ 0.49
SMARCA4-211ENST00000586921 COG3Q96JB2 828 aa18.11■□□□□ 0.49
SMARCA4-211ENST00000586921 TERF2IPQ9NYB0 399 aa18.1■□□□□ 0.49
SMARCA4-211ENST00000586921 A0A1W2PP64 1363 aa18.09■□□□□ 0.49
SMARCA4-211ENST00000586921 DDR1Q08345 913 aa18.09■□□□□ 0.49
SMARCA4-211ENST00000586921 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
SMARCA4-211ENST00000586921 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.48
SMARCA4-211ENST00000586921 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
SMARCA4-211ENST00000586921 KDRP35968 1356 aa18.07■□□□□ 0.48
SMARCA4-211ENST00000586921 CNTNAP4Q9C0A0 1308 aa18.07■□□□□ 0.48
SMARCA4-211ENST00000586921 RPS6KA4O75676 772 aa18.07■□□□□ 0.48
SMARCA4-211ENST00000586921 FKBP8Q14318 412 aa18.06■□□□□ 0.48
SMARCA4-211ENST00000586921 RRS1Q15050 365 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-211ENST00000586921 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
SMARCA4-211ENST00000586921 NFKBIEO00221 500 aa18.05■□□□□ 0.48
SMARCA4-211ENST00000586921 ERFEQ4G0M1 354 aa18.05■□□□□ 0.48
SMARCA4-211ENST00000586921 LDHDQ86WU2 507 aa18.05■□□□□ 0.48
SMARCA4-211ENST00000586921 COL5A3P25940 1745 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-211ENST00000586921 RASSF10A6NK89 507 aa18.04■□□□□ 0.48
SMARCA4-211ENST00000586921 DEFB115Q30KQ5 88 aa18.04■□□□□ 0.48
SMARCA4-211ENST00000586921 BEGAINQ9BUH8 593 aa18.04■□□□□ 0.48
SMARCA4-211ENST00000586921 SRP68Q9UHB9 627 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-211ENST00000586921 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-211ENST00000586921 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-211ENST00000586921 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
SMARCA4-211ENST00000586921 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-211ENST00000586921 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
SMARCA4-211ENST00000586921 ZNF831Q5JPB2 1677 aa18.03■□□□□ 0.48
SMARCA4-211ENST00000586921 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-211ENST00000586921 POLRMTO00411 1230 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-211ENST00000586921 SLC4A9Q96Q91 983 aa18.02■□□□□ 0.48
SMARCA4-211ENST00000586921 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.47
SMARCA4-211ENST00000586921 IQCA1LA6NCM1 817 aa18.01■□□□□ 0.47
SMARCA4-211ENST00000586921 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
SMARCA4-211ENST00000586921 DICER1Q9UPY3 1922 aaKnown RBP18■□□□□ 0.47
SMARCA4-211ENST00000586921 DDNO94850 711 aaPredicted RBP18■□□□□ 0.47
SMARCA4-211ENST00000586921 ITGBL1O95965 494 aaPredicted RBP18■□□□□ 0.47
SMARCA4-211ENST00000586921 MCOLN1Q9GZU1 580 aa18■□□□□ 0.47
SMARCA4-211ENST00000586921 INSRP06213 1382 aa18■□□□□ 0.47
SMARCA4-211ENST00000586921 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
SMARCA4-211ENST00000586921 ABT1Q9ULW3 272 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-211ENST00000586921 PRPF38BQ5VTL8 546 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms