RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 HMOX1P09601 288 aa16.58■□□□□ 0.24
ERCC2-207ENST00000586441 ARXQ96QS3 562 aa16.58■□□□□ 0.24
ERCC2-207ENST00000586441 NUDCQ9Y266 331 aa16.58■□□□□ 0.24
ERCC2-207ENST00000586441 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.24
ERCC2-207ENST00000586441 C4BP0C0L5 1744 aa16.57■□□□□ 0.24
ERCC2-207ENST00000586441 POLD1P28340 1107 aa16.57■□□□□ 0.24
ERCC2-207ENST00000586441 PPP2R1AP30153 589 aa16.57■□□□□ 0.24
ERCC2-207ENST00000586441 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
ERCC2-207ENST00000586441 COL23A1Q86Y22 540 aaPredicted RBP16.57■□□□□ 0.24
ERCC2-207ENST00000586441 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
ERCC2-207ENST00000586441 SSFA2P28290 1259 aa16.56■□□□□ 0.24
ERCC2-207ENST00000586441 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
ERCC2-207ENST00000586441 NFATC2IPQ8NCF5 419 aa16.56■□□□□ 0.24
ERCC2-207ENST00000586441 AK7Q96M32 723 aa16.56■□□□□ 0.24
ERCC2-207ENST00000586441 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
ERCC2-207ENST00000586441 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
ERCC2-207ENST00000586441 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
ERCC2-207ENST00000586441 U2SURPO15042 1029 aaKnown RBP16.54■□□□□ 0.24
ERCC2-207ENST00000586441 RNMTO43148 476 aaKnown RBP16.54■□□□□ 0.24
ERCC2-207ENST00000586441 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
ERCC2-207ENST00000586441 ITPK1Q13572 414 aa16.54■□□□□ 0.24
ERCC2-207ENST00000586441 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
ERCC2-207ENST00000586441 UBR3Q6ZT12 1888 aa16.54■□□□□ 0.24
ERCC2-207ENST00000586441 ADAMTS7Q9UKP4 1686 aa16.53■□□□□ 0.24
ERCC2-207ENST00000586441 FCHSD2O94868 740 aa16.53■□□□□ 0.24
ERCC2-207ENST00000586441 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
ERCC2-207ENST00000586441 FHDC1Q9C0D6 1143 aaPredicted RBP16.53■□□□□ 0.24
ERCC2-207ENST00000586441 ADRA2BP18089 450 aa16.52■□□□□ 0.24
ERCC2-207ENST00000586441 SLC4A9Q96Q91 983 aa16.52■□□□□ 0.24
ERCC2-207ENST00000586441 MRC1P22897 1456 aa16.52■□□□□ 0.23
ERCC2-207ENST00000586441 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
ERCC2-207ENST00000586441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.51■□□□□ 0.23
ERCC2-207ENST00000586441 GNAT3A8MTJ3 354 aa16.51■□□□□ 0.23
ERCC2-207ENST00000586441 MSH5O43196 834 aa16.51■□□□□ 0.23
ERCC2-207ENST00000586441 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
ERCC2-207ENST00000586441 RBM42Q9BTD8 480 aaKnown RBP16.51■□□□□ 0.23
ERCC2-207ENST00000586441 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
ERCC2-207ENST00000586441 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
ERCC2-207ENST00000586441 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
ERCC2-207ENST00000586441 VIRMAQ69YN4 1812 aaKnown RBP16.5■□□□□ 0.23
ERCC2-207ENST00000586441 RALBP1Q15311 655 aa16.5■□□□□ 0.23
ERCC2-207ENST00000586441 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
ERCC2-207ENST00000586441 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
ERCC2-207ENST00000586441 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
ERCC2-207ENST00000586441 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
ERCC2-207ENST00000586441 GNPATO15228 680 aa16.48■□□□□ 0.23
ERCC2-207ENST00000586441 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
ERCC2-207ENST00000586441 PRKAR2BP31323 418 aa16.48■□□□□ 0.23
ERCC2-207ENST00000586441 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
ERCC2-207ENST00000586441 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
ERCC2-207ENST00000586441 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
ERCC2-207ENST00000586441 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
ERCC2-207ENST00000586441 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
ERCC2-207ENST00000586441 ANP32CO43423 234 aa16.46■□□□□ 0.23
ERCC2-207ENST00000586441 NLGN1Q8N2Q7 840 aa16.46■□□□□ 0.23
ERCC2-207ENST00000586441 IL17REQ8NFR9 667 aa16.46■□□□□ 0.23
ERCC2-207ENST00000586441 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
ERCC2-207ENST00000586441 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
ERCC2-207ENST00000586441 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
ERCC2-207ENST00000586441 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.23
ERCC2-207ENST00000586441 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.22
ERCC2-207ENST00000586441 TEFQ10587 303 aa16.45■□□□□ 0.22
ERCC2-207ENST00000586441 PHF14O94880 888 aa16.44■□□□□ 0.22
ERCC2-207ENST00000586441 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
ERCC2-207ENST00000586441 ARHGEF1Q92888 912 aaKnown RBP16.44■□□□□ 0.22
ERCC2-207ENST00000586441 NEFMP07197 916 aa16.43■□□□□ 0.22
ERCC2-207ENST00000586441 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
ERCC2-207ENST00000586441 CCER2I3L3R5 266 aa16.42■□□□□ 0.22
ERCC2-207ENST00000586441 RFC4P35249 363 aa16.42■□□□□ 0.22
ERCC2-207ENST00000586441 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
ERCC2-207ENST00000586441 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
ERCC2-207ENST00000586441 UBR2Q8IWV8 1755 aa16.41■□□□□ 0.22
ERCC2-207ENST00000586441 KCPQ6ZWJ8 1503 aa16.41■□□□□ 0.22
ERCC2-207ENST00000586441 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
ERCC2-207ENST00000586441 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
ERCC2-207ENST00000586441 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
ERCC2-207ENST00000586441 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
ERCC2-207ENST00000586441 TJP1Q07157 1748 aa16.41■□□□□ 0.22
ERCC2-207ENST00000586441 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
ERCC2-207ENST00000586441 SLC39A6Q13433 755 aa16.4■□□□□ 0.22
ERCC2-207ENST00000586441 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
ERCC2-207ENST00000586441 STARD3NLO95772 234 aa16.39■□□□□ 0.21
ERCC2-207ENST00000586441 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
ERCC2-207ENST00000586441 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
ERCC2-207ENST00000586441 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
ERCC2-207ENST00000586441 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
ERCC2-207ENST00000586441 GYS1P13807 737 aa16.38■□□□□ 0.21
ERCC2-207ENST00000586441 CHD4Q14839 1912 aa16.38■□□□□ 0.21
ERCC2-207ENST00000586441 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
ERCC2-207ENST00000586441 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
ERCC2-207ENST00000586441 MMP10P09238 476 aa16.37■□□□□ 0.21
ERCC2-207ENST00000586441 ZNF496Q96IT1 587 aaPredicted RBP16.37■□□□□ 0.21
ERCC2-207ENST00000586441 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
ERCC2-207ENST00000586441 USP42Q9H9J4 1324 aaKnown RBP16.37■□□□□ 0.21
ERCC2-207ENST00000586441 BTBD11A6QL63 1104 aa16.36■□□□□ 0.21
ERCC2-207ENST00000586441 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
ERCC2-207ENST00000586441 YY1P25490 414 aa16.36■□□□□ 0.21
ERCC2-207ENST00000586441 GPR162Q16538 588 aa16.36■□□□□ 0.21
ERCC2-207ENST00000586441 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
ERCC2-207ENST00000586441 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms