RNA–Protein interactions for RNA: ENST00000585047.5

THRA-210, Transcript of thyroid hormone receptor alpha, human

TSL 4

Gene THRA, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THRA-210	ENST00000585047	MTHFSD	Q2M296	383 aa	Known RBP	33.34	■■■□□ 2.93
THRA-210	ENST00000585047	AK7	Q96M32	723 aa		33.34	■■■□□ 2.93
THRA-210	ENST00000585047	NFATC2IP	Q8NCF5	419 aa		33.33	■■■□□ 2.93
THRA-210	ENST00000585047	ARX	Q96QS3	562 aa		33.33	■■■□□ 2.93
THRA-210	ENST00000585047	MSH5	O43196	834 aa		33.32	■■■□□ 2.92
THRA-210	ENST00000585047	FLAD1	Q8NFF5	587 aa		33.32	■■■□□ 2.92
THRA-210	ENST00000585047	COL24A1	Q17RW2	1714 aa		33.31	■■■□□ 2.92
THRA-210	ENST00000585047	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.31	■■■□□ 2.92
THRA-210	ENST00000585047	SCN11A	Q9UI33	1791 aa		33.3	■■■□□ 2.92
THRA-210	ENST00000585047	SLC4A9	Q96Q91	983 aa		33.3	■■■□□ 2.92
THRA-210	ENST00000585047	RBM42	Q9BTD8	480 aa	Known RBP	33.3	■■■□□ 2.92
THRA-210	ENST00000585047	POLD1	P28340	1107 aa		33.29	■■■□□ 2.92
THRA-210	ENST00000585047	AMIGO3	Q86WK7	504 aa		33.29	■■■□□ 2.92
THRA-210	ENST00000585047	LGR6	Q9HBX8	967 aa		33.29	■■■□□ 2.92
THRA-210	ENST00000585047	RNMT	O43148	476 aa	Known RBP	33.27	■■■□□ 2.92
THRA-210	ENST00000585047	SYT17	Q9BSW7	474 aa		33.27	■■■□□ 2.92
THRA-210	ENST00000585047	ZNF831	Q5JPB2	1677 aa		33.26	■■■□□ 2.92
THRA-210	ENST00000585047	SLC52A2	Q9HAB3	445 aa		33.26	■■■□□ 2.91
THRA-210	ENST00000585047	MRC1	P22897	1456 aa		33.25	■■■□□ 2.91
THRA-210	ENST00000585047	UBR3	Q6ZT12	1888 aa		33.25	■■■□□ 2.91
THRA-210	ENST00000585047	NUDC	Q9Y266	331 aa		33.25	■■■□□ 2.91
THRA-210	ENST00000585047	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.24	■■■□□ 2.91
THRA-210	ENST00000585047	PHF14	O94880	888 aa		33.24	■■■□□ 2.91
THRA-210	ENST00000585047	SSFA2	P28290	1259 aa		33.24	■■■□□ 2.91
THRA-210	ENST00000585047	SMIM5	Q71RC9	77 aa		33.24	■■■□□ 2.91
THRA-210	ENST00000585047	ADAMTS7	Q9UKP4	1686 aa		33.23	■■■□□ 2.91
THRA-210	ENST00000585047	MAP3K5	Q99683	1374 aa		33.23	■■■□□ 2.91
THRA-210	ENST00000585047	GNPAT	O15228	680 aa		33.23	■■■□□ 2.91
THRA-210	ENST00000585047	PTCD1	O75127	700 aa	Known RBP	33.22	■■■□□ 2.91
THRA-210	ENST00000585047	MSL1	Q68DK7	614 aa		33.22	■■■□□ 2.91
THRA-210	ENST00000585047	RSPH6A	Q9H0K4	717 aa		33.22	■■■□□ 2.91
THRA-210	ENST00000585047	GAS2L2	Q8NHY3	880 aa		33.21	■■■□□ 2.91
THRA-210	ENST00000585047	PRKAR2B	P31323	418 aa		33.2	■■■□□ 2.91
THRA-210	ENST00000585047	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.19	■■■□□ 2.9
THRA-210	ENST00000585047	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.19	■■■□□ 2.9
THRA-210	ENST00000585047	PHACTR3	Q96KR7	559 aa		33.18	■■■□□ 2.9
THRA-210	ENST00000585047	COL5A3	P25940	1745 aa	Predicted RBP	33.18	■■■□□ 2.9
THRA-210	ENST00000585047	RC3H1	Q5TC82	1133 aa	Known RBP	33.17	■■■□□ 2.9
THRA-210	ENST00000585047	DCAF8L1	A6NGE4	600 aa		33.16	■■■□□ 2.9
THRA-210	ENST00000585047	GNAT3	A8MTJ3	354 aa		33.16	■■■□□ 2.9
THRA-210	ENST00000585047	CNTNAP4	Q9C0A0	1308 aa		33.16	■■■□□ 2.9
THRA-210	ENST00000585047	DDX10	Q13206	875 aa	Known RBP	33.15	■■■□□ 2.9
THRA-210	ENST00000585047	VIRMA	Q69YN4	1812 aa	Known RBP	33.14	■■■□□ 2.9
THRA-210	ENST00000585047	KLHL34	Q8N239	644 aa		33.14	■■■□□ 2.9
THRA-210	ENST00000585047	RTCB	Q9Y3I0	505 aa	Known RBP	33.14	■■■□□ 2.9
THRA-210	ENST00000585047	CIC	Q96RK0	1608 aa	Predicted RBP	33.13	■■■□□ 2.89
THRA-210	ENST00000585047	FCHSD2	O94868	740 aa		33.13	■■■□□ 2.89
THRA-210	ENST00000585047	SLC39A6	Q13433	755 aa		33.13	■■■□□ 2.89
THRA-210	ENST00000585047	IL17RE	Q8NFR9	667 aa		33.13	■■■□□ 2.89
THRA-210	ENST00000585047	TJP1	Q07157	1748 aa		33.11	■■■□□ 2.89
THRA-210	ENST00000585047	KCP	Q6ZWJ8	1503 aa		33.09	■■■□□ 2.89
THRA-210	ENST00000585047	RPS6KA4	O75676	772 aa		33.09	■■■□□ 2.89
THRA-210	ENST00000585047	TRAPPC3L	Q5T215	181 aa		33.09	■■■□□ 2.89
THRA-210	ENST00000585047	ADRA2B	P18089	450 aa		33.08	■■■□□ 2.89
THRA-210	ENST00000585047	CRKL	P46109	303 aa	Known RBP	33.08	■■■□□ 2.89
THRA-210	ENST00000585047	RALBP1	Q15311	655 aa		33.08	■■■□□ 2.89
THRA-210	ENST00000585047	TEF	Q10587	303 aa		33.07	■■■□□ 2.88
THRA-210	ENST00000585047	CEMIP	Q8WUJ3	1361 aa		33.07	■■■□□ 2.88
THRA-210	ENST00000585047	DNAJC10	Q8IXB1	793 aa		33.06	■■■□□ 2.88
THRA-210	ENST00000585047	MYH14	Q7Z406	1995 aa	Known RBP	33.05	■■■□□ 2.88
THRA-210	ENST00000585047	ARHGEF1	Q92888	912 aa	Known RBP	33.05	■■■□□ 2.88
THRA-210	ENST00000585047	NLGN2	Q8NFZ4	835 aa		33.04	■■■□□ 2.88
THRA-210	ENST00000585047	INTS5	Q6P9B9	1019 aa	Known RBP	33.02	■■■□□ 2.88
THRA-210	ENST00000585047	UBR2	Q8IWV8	1755 aa		33.01	■■■□□ 2.88
THRA-210	ENST00000585047	ZEB1	P37275	1124 aa	Predicted RBP	33.01	■■■□□ 2.87
THRA-210	ENST00000585047	TTC5	Q8N0Z6	440 aa		33.01	■■■□□ 2.87
THRA-210	ENST00000585047	VSIG10	Q8N0Z9	540 aa		33.01	■■■□□ 2.87
THRA-210	ENST00000585047	SIPA1L3	O60292	1781 aa	Predicted RBP	33.01	■■■□□ 2.87
THRA-210	ENST00000585047	RFC4	P35249	363 aa		33	■■■□□ 2.87
THRA-210	ENST00000585047	CYP19A1	P11511	503 aa	Predicted RBP	32.99	■■■□□ 2.87
THRA-210	ENST00000585047	ZNF790	Q6PG37	636 aa		32.99	■■■□□ 2.87
THRA-210	ENST00000585047	CCDC87	Q9NVE4	849 aa		32.99	■■■□□ 2.87
THRA-210	ENST00000585047	CD2AP	Q9Y5K6	639 aa		32.99	■■■□□ 2.87
THRA-210	ENST00000585047	RTF1	Q92541	710 aa	Known RBP	32.97	■■■□□ 2.87
THRA-210	ENST00000585047	C4A	P0C0L4	1744 aa		32.97	■■■□□ 2.87
THRA-210	ENST00000585047	GYS1	P13807	737 aa		32.96	■■■□□ 2.87
THRA-210	ENST00000585047	NLGN1	Q8N2Q7	840 aa		32.96	■■■□□ 2.87
THRA-210	ENST00000585047	ZNF496	Q96IT1	587 aa	Predicted RBP	32.96	■■■□□ 2.87
THRA-210	ENST00000585047	MMP10	P09238	476 aa		32.95	■■■□□ 2.87
THRA-210	ENST00000585047	MCM10	Q7L590	875 aa		32.95	■■■□□ 2.87
THRA-210	ENST00000585047	PLEKHF1	Q96S99	279 aa		32.95	■■■□□ 2.87
THRA-210	ENST00000585047	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.95	■■■□□ 2.86
THRA-210	ENST00000585047	HTATSF1	O43719	755 aa	Known RBP	32.94	■■■□□ 2.86
THRA-210	ENST00000585047	GPR162	Q16538	588 aa		32.94	■■■□□ 2.86
THRA-210	ENST00000585047	BTBD11	A6QL63	1104 aa		32.93	■■■□□ 2.86
THRA-210	ENST00000585047	NEFM	P07197	916 aa		32.93	■■■□□ 2.86
THRA-210	ENST00000585047	YY1	P25490	414 aa		32.93	■■■□□ 2.86
THRA-210	ENST00000585047	SOS1	Q07889	1333 aa	Predicted RBP	32.93	■■■□□ 2.86
THRA-210	ENST00000585047	HEG1	Q9ULI3	1381 aa		32.93	■■■□□ 2.86
THRA-210	ENST00000585047	SRP68	Q9UHB9	627 aa	Known RBP	32.92	■■■□□ 2.86
THRA-210	ENST00000585047	USP42	Q9H9J4	1324 aa	Known RBP	32.92	■■■□□ 2.86
THRA-210	ENST00000585047	DCTN1	Q14203	1278 aa		32.91	■■■□□ 2.86
THRA-210	ENST00000585047	ZBTB1	Q9Y2K1	713 aa		32.91	■■■□□ 2.86
THRA-210	ENST00000585047	PELP1	Q8IZL8	1130 aa	Known RBP	32.9	■■■□□ 2.86
THRA-210	ENST00000585047	KCNQ3	O43525	872 aa		32.89	■■■□□ 2.86
THRA-210	ENST00000585047	FMNL2	Q96PY5	1086 aa		32.89	■■■□□ 2.86
THRA-210	ENST00000585047	PNN	Q9H307	717 aa	Known RBP	32.89	■■■□□ 2.86
THRA-210	ENST00000585047	STARD3NL	O95772	234 aa		32.88	■■■□□ 2.85
THRA-210	ENST00000585047	UTRN	P46939	3433 aa		32.88	■■■□□ 2.85
THRA-210	ENST00000585047	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.87	■■■□□ 2.85

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