RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ADRA2BP18089 450 aa14.74□□□□□ -0.05
CSNK1D-226ENST00000585026 ITPK1Q13572 414 aa14.74□□□□□ -0.05
CSNK1D-226ENST00000585026 IFFO2Q5TF58 517 aa14.74□□□□□ -0.05
CSNK1D-226ENST00000585026 ATG3Q9NT62 314 aa14.74□□□□□ -0.05
CSNK1D-226ENST00000585026 PKD1L3Q7Z443 1732 aa14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 EIF4A2Q14240 407 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 PLEKHO1Q53GL0 409 aaPredicted RBP14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 SMIM5Q71RC9 77 aa14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 DCAF5Q96JK2 942 aa14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 WWC3Q9ULE0 1092 aa14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 TAF1LQ8IZX4 1826 aa14.73□□□□□ -0.05
CSNK1D-226ENST00000585026 AMOTQ4VCS5 1084 aa14.72□□□□□ -0.05
CSNK1D-226ENST00000585026 RC3H1Q5TC82 1133 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-226ENST00000585026 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-226ENST00000585026 CCDC87Q9NVE4 849 aa14.72□□□□□ -0.05
CSNK1D-226ENST00000585026 RFC4P35249 363 aa14.71□□□□□ -0.05
CSNK1D-226ENST00000585026 TNNT2P45379 298 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-226ENST00000585026 GOLGB1Q14789 3259 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-226ENST00000585026 TOGARAM1Q9Y4F4 1720 aa14.7□□□□□ -0.06
CSNK1D-226ENST00000585026 CABP4P57796 275 aa14.7□□□□□ -0.06
CSNK1D-226ENST00000585026 BCS1LQ9Y276 419 aa14.7□□□□□ -0.06
CSNK1D-226ENST00000585026 PARP3Q9Y6F1 533 aa14.7□□□□□ -0.06
CSNK1D-226ENST00000585026 ITGB4P16144 1822 aa14.7□□□□□ -0.06
CSNK1D-226ENST00000585026 RPS6KA4O75676 772 aa14.69□□□□□ -0.06
CSNK1D-226ENST00000585026 UBR3Q6ZT12 1888 aa14.69□□□□□ -0.06
CSNK1D-226ENST00000585026 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
CSNK1D-226ENST00000585026 C1orf141Q5JVX7 400 aa14.68□□□□□ -0.06
CSNK1D-226ENST00000585026 ZNF530Q6P9A1 599 aaPredicted RBP14.68□□□□□ -0.06
CSNK1D-226ENST00000585026 ARHGEF1Q92888 912 aaKnown RBP14.68□□□□□ -0.06
CSNK1D-226ENST00000585026 A0A0G2JLW4 131 aa14.67□□□□□ -0.06
CSNK1D-226ENST00000585026 KIF3CO14782 793 aa14.67□□□□□ -0.06
CSNK1D-226ENST00000585026 FCHSD2O94868 740 aa14.67□□□□□ -0.06
CSNK1D-226ENST00000585026 MTHFSP49914 203 aa14.67□□□□□ -0.06
CSNK1D-226ENST00000585026 ARHGAP27Q6ZUM4 889 aa14.67□□□□□ -0.06
CSNK1D-226ENST00000585026 KDRP35968 1356 aa14.67□□□□□ -0.06
CSNK1D-226ENST00000585026 MAP2P11137 1827 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-226ENST00000585026 PXDNLA1KZ92 1463 aa14.66□□□□□ -0.06
CSNK1D-226ENST00000585026 GYS1P13807 737 aa14.66□□□□□ -0.06
CSNK1D-226ENST00000585026 APLP1P51693 650 aa14.66□□□□□ -0.06
CSNK1D-226ENST00000585026 ANKRD26Q9UPS8 1709 aa14.66□□□□□ -0.06
CSNK1D-226ENST00000585026 TOMM70O94826 608 aa14.65□□□□□ -0.06
CSNK1D-226ENST00000585026 EIF4G2P78344 907 aaKnown RBP eCLIP14.65□□□□□ -0.06
CSNK1D-226ENST00000585026 DPEP1P16444 411 aa14.64□□□□□ -0.07
CSNK1D-226ENST00000585026 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
CSNK1D-226ENST00000585026 SLC4A9Q96Q91 983 aa14.64□□□□□ -0.07
CSNK1D-226ENST00000585026 PANK3Q9H999 370 aa14.64□□□□□ -0.07
CSNK1D-226ENST00000585026 PIM2Q9P1W9 311 aa14.64□□□□□ -0.07
CSNK1D-226ENST00000585026 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
CSNK1D-226ENST00000585026 PTCD1O75127 700 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-226ENST00000585026 C16orf71Q8IYS4 520 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-226ENST00000585026 CRKLP46109 303 aaKnown RBP14.62□□□□□ -0.07
CSNK1D-226ENST00000585026 CICQ96RK0 1608 aaPredicted RBP14.62□□□□□ -0.07
CSNK1D-226ENST00000585026 DALRD3Q5D0E6 543 aaKnown RBP14.61□□□□□ -0.07
CSNK1D-226ENST00000585026 NFATC2IPQ8NCF5 419 aa14.61□□□□□ -0.07
CSNK1D-226ENST00000585026 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
CSNK1D-226ENST00000585026 ZPR1O75312 459 aa14.6□□□□□ -0.07
CSNK1D-226ENST00000585026 C9orf131Q5VYM1 1079 aa14.6□□□□□ -0.07
CSNK1D-226ENST00000585026 SULT6B1Q6IMI4 303 aa14.6□□□□□ -0.07
CSNK1D-226ENST00000585026 ZNF831Q5JPB2 1677 aa14.6□□□□□ -0.07
CSNK1D-226ENST00000585026 KDM2BQ8NHM5 1336 aa14.6□□□□□ -0.07
CSNK1D-226ENST00000585026 KDM6AO15550 1401 aaPredicted RBP14.59□□□□□ -0.07
CSNK1D-226ENST00000585026 RBM46Q8TBY0 533 aaKnown RBP14.59□□□□□ -0.07
CSNK1D-226ENST00000585026 USP42Q9H9J4 1324 aaKnown RBP14.59□□□□□ -0.07
CSNK1D-226ENST00000585026 HSPA5P11021 654 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-226ENST00000585026 AKAP4Q5JQC9 854 aa14.58□□□□□ -0.08
CSNK1D-226ENST00000585026 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
CSNK1D-226ENST00000585026 NMRK2Q9NPI5 230 aa14.58□□□□□ -0.08
CSNK1D-226ENST00000585026 KCNA3P22001 575 aa14.57□□□□□ -0.08
CSNK1D-226ENST00000585026 FKBP8Q14318 412 aa14.57□□□□□ -0.08
CSNK1D-226ENST00000585026 SRP68Q9UHB9 627 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-226ENST00000585026 C4AP0C0L4 1744 aa14.57□□□□□ -0.08
CSNK1D-226ENST00000585026 KIF13BQ9NQT8 1826 aa14.57□□□□□ -0.08
CSNK1D-226ENST00000585026 CEP350Q5VT06 3117 aa14.56□□□□□ -0.08
CSNK1D-226ENST00000585026 FSTL1Q12841 308 aa14.56□□□□□ -0.08
CSNK1D-226ENST00000585026 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
CSNK1D-226ENST00000585026 RNF181Q9P0P0 153 aa14.56□□□□□ -0.08
CSNK1D-226ENST00000585026 IL13P35225 146 aa14.55□□□□□ -0.08
CSNK1D-226ENST00000585026 DDR1Q08345 913 aa14.55□□□□□ -0.08
CSNK1D-226ENST00000585026 INTS5Q6P9B9 1019 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-226ENST00000585026 POLRMTO00411 1230 aaKnown RBP14.54□□□□□ -0.08
CSNK1D-226ENST00000585026 TM4SF1P30408 202 aa14.54□□□□□ -0.08
CSNK1D-226ENST00000585026 N4BP2Q86UW6 1770 aaPredicted RBP14.53□□□□□ -0.08
CSNK1D-226ENST00000585026 ZC3H4Q9UPT8 1303 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-226ENST00000585026 CHRNA5P30532 468 aa14.53□□□□□ -0.08
CSNK1D-226ENST00000585026 USPL1Q5W0Q7 1092 aa14.53□□□□□ -0.08
CSNK1D-226ENST00000585026 DNAJC10Q8IXB1 793 aa14.53□□□□□ -0.08
CSNK1D-226ENST00000585026 DNAJC5GQ8N7S2 189 aa14.53□□□□□ -0.08
CSNK1D-226ENST00000585026 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.08
CSNK1D-226ENST00000585026 SOS1Q07889 1333 aaPredicted RBP14.52□□□□□ -0.08
CSNK1D-226ENST00000585026 RNMTO43148 476 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-226ENST00000585026 CYP19A1P11511 503 aaPredicted RBP14.52□□□□□ -0.09
CSNK1D-226ENST00000585026 NARFQ9UHQ1 456 aa14.52□□□□□ -0.09
CSNK1D-226ENST00000585026 VSIG10Q8N0Z9 540 aa14.51□□□□□ -0.09
CSNK1D-226ENST00000585026 RRAGCQ9HB90 399 aa14.51□□□□□ -0.09
CSNK1D-226ENST00000585026 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
CSNK1D-226ENST00000585026 A0A087WZG4 1122 aa14.5□□□□□ -0.09
CSNK1D-226ENST00000585026 STARD3NLO95772 234 aa14.5□□□□□ -0.09
CSNK1D-226ENST00000585026 TTC5Q8N0Z6 440 aa14.5□□□□□ -0.09
CSNK1D-226ENST00000585026 SMC1BQ8NDV3 1235 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms