RNA–Protein interactions for RNA: ENST00000584965.1

NARF-227, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 300 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-227	ENST00000584965	MEIS3	Q99687	375 aa		12.1	□□□□□ -0.47
NARF-227	ENST00000584965	OSBPL3	Q9H4L5	887 aa		12.1	□□□□□ -0.47
NARF-227	ENST00000584965	GC	P02774	474 aa		12.09	□□□□□ -0.47
NARF-227	ENST00000584965	TTC22	Q5TAA0	569 aa		12.09	□□□□□ -0.47
NARF-227	ENST00000584965	PLEKHM2	Q8IWE5	1019 aa		12.09	□□□□□ -0.47
NARF-227	ENST00000584965	C19orf44	Q9H6X5	657 aa		12.09	□□□□□ -0.47
NARF-227	ENST00000584965	TNS3	Q68CZ2	1445 aa		12.09	□□□□□ -0.47
NARF-227	ENST00000584965	GNAI2	P04899	355 aa		12.08	□□□□□ -0.48
NARF-227	ENST00000584965	SLC4A3	P48751	1232 aa		12.08	□□□□□ -0.48
NARF-227	ENST00000584965	MFAP1	P55081	439 aa	Known RBP	12.08	□□□□□ -0.48
NARF-227	ENST00000584965	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.08	□□□□□ -0.48
NARF-227	ENST00000584965	NBPF6	Q5VWK0	638 aa		12.08	□□□□□ -0.48
NARF-227	ENST00000584965	G2E3	Q7L622	706 aa		12.08	□□□□□ -0.48
NARF-227	ENST00000584965	NBPF4	Q96M43	638 aa		12.08	□□□□□ -0.48
NARF-227	ENST00000584965	AOX1	Q06278	1338 aa		12.08	□□□□□ -0.48
NARF-227	ENST00000584965	SALL3	Q9BXA9	1300 aa		12.08	□□□□□ -0.48
NARF-227	ENST00000584965	CPD	O75976	1380 aa		12.07	□□□□□ -0.48
NARF-227	ENST00000584965	XIRP1	Q702N8	1843 aa	Known RBP	12.07	□□□□□ -0.48
NARF-227	ENST00000584965	GSPT1	P15170	499 aa	Known RBP	12.07	□□□□□ -0.48
NARF-227	ENST00000584965	NUTM2G	Q5VZR2	741 aa		12.07	□□□□□ -0.48
NARF-227	ENST00000584965	TBC1D9	Q6ZT07	1266 aa		12.07	□□□□□ -0.48
NARF-227	ENST00000584965	RGPD5	Q99666	1765 aa		12.07	□□□□□ -0.48
NARF-227	ENST00000584965	EIF4A1	P60842	406 aa	Known RBP	12.06	□□□□□ -0.48
NARF-227	ENST00000584965	ERBB3	P21860	1342 aa		12.06	□□□□□ -0.48
NARF-227	ENST00000584965	LAMB4	A4D0S4	1761 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	DDIT3	P35638	169 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	HDGFL1	Q5TGJ6	251 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	HSCB	Q8IWL3	235 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	ORAI2	Q96SN7	254 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.05	□□□□□ -0.48	7e-7	■■□□□ 12.2
NARF-227	ENST00000584965	MIS18A	Q9NYP9	233 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.05	□□□□□ -0.48
NARF-227	ENST00000584965	GLI3	P10071	1580 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	TMEM94	Q12767	1356 aa		12.05	□□□□□ -0.48
NARF-227	ENST00000584965	ABCA3	Q99758	1704 aa		12.04	□□□□□ -0.48
NARF-227	ENST00000584965	FKBP5	Q13451	457 aa	Predicted RBP	12.04	□□□□□ -0.48
NARF-227	ENST00000584965	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.04	□□□□□ -0.48
NARF-227	ENST00000584965	KRT28	Q7Z3Y7	464 aa		12.04	□□□□□ -0.48
NARF-227	ENST00000584965	C14orf37	Q86TY3	774 aa		12.04	□□□□□ -0.48
NARF-227	ENST00000584965	PROSER2	Q86WR7	435 aa	Predicted RBP	12.04	□□□□□ -0.48
NARF-227	ENST00000584965	IL27	Q8NEV9	243 aa		12.04	□□□□□ -0.48
NARF-227	ENST00000584965	ANKRD24	Q8TF21	1146 aa		12.04	□□□□□ -0.48
NARF-227	ENST00000584965	RNMT	O43148	476 aa	Known RBP	12.03	□□□□□ -0.48
NARF-227	ENST00000584965	EPB41L2	O43491	1005 aa	Known RBP	12.03	□□□□□ -0.48
NARF-227	ENST00000584965	ATP8B2	P98198	1209 aa		12.03	□□□□□ -0.48
NARF-227	ENST00000584965	LTV1	Q96GA3	475 aa	Predicted RBP	12.03	□□□□□ -0.48
NARF-227	ENST00000584965	KIF2C	Q99661	725 aa		12.03	□□□□□ -0.48
NARF-227	ENST00000584965	CHMP5	Q9NZZ3	219 aa		12.03	□□□□□ -0.48
NARF-227	ENST00000584965	NPHP3	Q7Z494	1330 aa		12.03	□□□□□ -0.48
NARF-227	ENST00000584965	C5	P01031	1676 aa		12.03	□□□□□ -0.48
NARF-227	ENST00000584965		F6X3S4	739 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	C1orf141	Q5JVX7	400 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	CADPS2	Q86UW7	1296 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	USHBP1	Q8N6Y0	703 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	SSH3	Q8TE77	659 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	IL17RA	Q96F46	866 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	SRCIN1	Q9C0H9	1055 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	STAP2	Q9UGK3	403 aa		12.02	□□□□□ -0.49
NARF-227	ENST00000584965	PAPPA	Q13219	1627 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	TEF	Q10587	303 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	MTX1	Q13505	466 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	POLA2	Q14181	598 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	RABEP1	Q15276	862 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	CASC1	Q6TDU7	716 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.01	□□□□□ -0.49
NARF-227	ENST00000584965	ADCY9	O60503	1353 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	KDM6A	O15550	1401 aa	Predicted RBP	12.01	□□□□□ -0.49
NARF-227	ENST00000584965	MEGF6	O75095	1541 aa		12.01	□□□□□ -0.49
NARF-227	ENST00000584965	RAB11FIP3	O75154	756 aa		12	□□□□□ -0.49
NARF-227	ENST00000584965	ALDH1L1	O75891	902 aa		12	□□□□□ -0.49
NARF-227	ENST00000584965	ATF3	P18847	181 aa		12	□□□□□ -0.49
NARF-227	ENST00000584965	GSE1	Q14687	1217 aa		12	□□□□□ -0.49
NARF-227	ENST00000584965	LRRCC1	Q9C099	1032 aa		12	□□□□□ -0.49
NARF-227	ENST00000584965	USP44	Q9H0E7	712 aa		12	□□□□□ -0.49
NARF-227	ENST00000584965	DBF4	Q9UBU7	674 aa	Predicted RBP	12	□□□□□ -0.49
NARF-227	ENST00000584965	UBR2	Q8IWV8	1755 aa		12	□□□□□ -0.49
NARF-227	ENST00000584965	FRAT2	O75474	233 aa	Predicted RBP	11.99	□□□□□ -0.49
NARF-227	ENST00000584965	UBTFL1	P0CB47	393 aa	Predicted RBP	11.99	□□□□□ -0.49
NARF-227	ENST00000584965	PDE1A	P54750	535 aa		11.99	□□□□□ -0.49
NARF-227	ENST00000584965	SLC4A10	Q6U841	1118 aa		11.99	□□□□□ -0.49
NARF-227	ENST00000584965	LRRC59	Q96AG4	307 aa	Known RBP	11.99	□□□□□ -0.49
NARF-227	ENST00000584965	LGR6	Q9HBX8	967 aa		11.99	□□□□□ -0.49
NARF-227	ENST00000584965	HDAC5	Q9UQL6	1122 aa		11.99	□□□□□ -0.49
NARF-227	ENST00000584965	USP42	Q9H9J4	1324 aa	Known RBP	11.99	□□□□□ -0.49
NARF-227	ENST00000584965	STRC	Q7RTU9	1775 aa		11.99	□□□□□ -0.49
NARF-227	ENST00000584965	NHSL1	Q5SYE7	1610 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	COL15A1	P39059	1388 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	UTY	O14607	1347 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	SPATA31A3	Q5VYP0	1347 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	BTBD11	A6QL63	1104 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	REC8	O95072	547 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	SDS	P20132	328 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	BEND3	Q5T5X7	828 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	DNAAF4	Q8WXU2	420 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965	RBM33	Q96EV2	1170 aa	Known RBP	11.98	□□□□□ -0.49
NARF-227	ENST00000584965	DNAJC5	Q9H3Z4	198 aa		11.98	□□□□□ -0.49
NARF-227	ENST00000584965		K7ELQ4	463 aa	Predicted RBP	11.97	□□□□□ -0.49
NARF-227	ENST00000584965	GIGYF1	O75420	1035 aa	Predicted RBP	11.97	□□□□□ -0.49
NARF-227	ENST00000584965	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.97	□□□□□ -0.49
NARF-227	ENST00000584965	USP26	Q9BXU7	913 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms