RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MEN1O00255 615 aa3.24□□□□□ -1.89
SMCHD1-211ENST00000584897 VSIG8P0DPA2 414 aa3.24□□□□□ -1.89
SMCHD1-211ENST00000584897 RNF144AP50876 292 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-211ENST00000584897 RTL5Q5HYW3 569 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-211ENST00000584897 LRRC4BQ9NT99 713 aa3.24□□□□□ -1.89
SMCHD1-211ENST00000584897 ATP1A2P50993 1020 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 TRIM46Q7Z4K8 759 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 TIMMDC1Q9NPL8 285 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 ANKIB1Q9P2G1 1089 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 SNRPBP14678 240 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 TAS1R3Q7RTX0 852 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 NACC1Q96RE7 527 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 SOS2Q07890 1332 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 ALAS2P22557 587 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 SRSF11Q05519 484 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 PCSK7Q16549 785 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 INTS6LQ5JSJ4 861 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 PCDHB11Q9Y5F2 797 aa3.23□□□□□ -1.89
SMCHD1-211ENST00000584897 RELBQ01201 579 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 RIPOR1Q6ZS17 1223 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 Q6ZVU0 165 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 GOLGA6L1Q8N7Z2 621 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 HLA-CQ95604 372 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 DYRK1BQ9Y463 629 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 MROH2BQ7Z745 1585 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 SH3RF1Q7Z6J0 888 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 TRIM22Q8IYM9 498 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 ZSCAN10Q96SZ4 725 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 FAM117AQ9C073 453 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 MBIPQ9NS73 344 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 NOD1Q9Y239 953 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 ADCY10Q96PN6 1610 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 A0A1B0GTH6 734 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 EIF4EBP3O60516 100 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 APBA3O96018 575 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 F11P03951 625 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 CTDSPL2Q05D32 466 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 RNF135Q8IUD6 432 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 SVOPQ8N4V2 548 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 EFCC1Q9HA90 598 aa3.22□□□□□ -1.89
SMCHD1-211ENST00000584897 RAB15P59190 212 aa3.21□□□□□ -1.89
SMCHD1-211ENST00000584897 KCNMA1Q12791 1236 aa3.21□□□□□ -1.89
SMCHD1-211ENST00000584897 NR6A1Q15406 480 aa3.21□□□□□ -1.89
SMCHD1-211ENST00000584897 CCDC155Q8N6L0 562 aa3.21□□□□□ -1.89
SMCHD1-211ENST00000584897 ARID3AQ99856 593 aa3.21□□□□□ -1.89
SMCHD1-211ENST00000584897 MKL2Q9ULH7 1088 aa3.21□□□□□ -1.89
SMCHD1-211ENST00000584897 FIGNL2A6NMB9 653 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 GMPRP36959 345 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 ITPKCQ96DU7 683 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 DOLKQ9UPQ8 538 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 NUP160Q12769 1436 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 ESPNB1AK53 854 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 PRRT3Q5FWE3 981 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 GALNT6Q8NCL4 622 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 VTI1AQ96AJ9 217 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 NIFKQ9BYG3 293 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 ZFAND3Q9H8U3 227 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 PODXL2Q9NZ53 605 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 FAM177BA6PVY3 158 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 MX2P20592 715 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 ITGA6P23229 1130 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 EML3Q32P44 896 aa3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 NUCKS1Q9H1E3 243 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 DNMT3AQ9Y6K1 912 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-211ENST00000584897 ABCA5Q8WWZ7 1642 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 SPATA31C2B4DYI2 1134 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 BCRP11274 1271 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 AMPD1P23109 780 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 HNRNPUQ00839 825 aaKnown RBP eCLIP3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 VWA5B2Q8N398 1253 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 BCORL1Q5H9F3 1711 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 MED1Q15648 1581 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 LAMC2Q13753 1193 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 TBC1D9Q6ZT07 1266 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 CNTNAP3BQ96NU0 1288 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 CNTNAP3Q9BZ76 1288 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 AVENQ9NQS1 362 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 SLC35F4A4IF30 521 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 GDF11O95390 407 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 EPB42P16452 691 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 UBTFP17480 764 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 GAS2L2Q8NHY3 880 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 GRIN2BQ13224 1484 aa3.2□□□□□ -1.9
SMCHD1-211ENST00000584897 GRM5P41594 1212 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 PTSQ03393 145 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 CLN3Q13286 438 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 GAS2L1Q99501 681 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 FAM13BQ9NYF5 915 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 PSME1Q06323 249 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 QPCTQ16769 361 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 NFATC2IPQ8NCF5 419 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 PRR12Q9ULL5 1215 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 ERVH48-1M5A8F1 160 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 WASLO00401 505 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 BMP1P13497 986 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 SRPK2P78362 688 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 RHBDD1Q8TEB9 315 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 LRRN4Q8WUT4 740 aa3.19□□□□□ -1.9
SMCHD1-211ENST00000584897 CYLDQ9NQC7 956 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms