RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 EIF4A2Q14240 407 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-234ENST00000584525 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
CDK5RAP3-234ENST00000584525 IFFO2Q5TF58 517 aa17.97■□□□□ 0.47
CDK5RAP3-234ENST00000584525 HSPA6P17066 643 aa17.96■□□□□ 0.47
CDK5RAP3-234ENST00000584525 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-234ENST00000584525 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
CDK5RAP3-234ENST00000584525 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
CDK5RAP3-234ENST00000584525 KIF20BQ96Q89 1820 aa17.94■□□□□ 0.46
CDK5RAP3-234ENST00000584525 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
CDK5RAP3-234ENST00000584525 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-234ENST00000584525 NLGN1Q8N2Q7 840 aa17.93■□□□□ 0.46
CDK5RAP3-234ENST00000584525 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
CDK5RAP3-234ENST00000584525 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
CDK5RAP3-234ENST00000584525 TGFB2P61812 414 aa17.92■□□□□ 0.46
CDK5RAP3-234ENST00000584525 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-234ENST00000584525 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
CDK5RAP3-234ENST00000584525 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
CDK5RAP3-234ENST00000584525 RFC4P35249 363 aa17.91■□□□□ 0.46
CDK5RAP3-234ENST00000584525 ARHGEF1Q92888 912 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-234ENST00000584525 SLC4A9Q96Q91 983 aa17.91■□□□□ 0.46
CDK5RAP3-234ENST00000584525 TAF1LQ8IZX4 1826 aa17.91■□□□□ 0.46
CDK5RAP3-234ENST00000584525 KIF3CO14782 793 aa17.9■□□□□ 0.46
CDK5RAP3-234ENST00000584525 ADRA2BP18089 450 aa17.9■□□□□ 0.46
CDK5RAP3-234ENST00000584525 CABP4P57796 275 aa17.9■□□□□ 0.46
CDK5RAP3-234ENST00000584525 RC3H1Q5TC82 1133 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-234ENST00000584525 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
CDK5RAP3-234ENST00000584525 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
CDK5RAP3-234ENST00000584525 ZNF530Q6P9A1 599 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-234ENST00000584525 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
CDK5RAP3-234ENST00000584525 KDRP35968 1356 aa17.89■□□□□ 0.45
CDK5RAP3-234ENST00000584525 ITGB4P16144 1822 aa17.88■□□□□ 0.45
CDK5RAP3-234ENST00000584525 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
CDK5RAP3-234ENST00000584525 RPS6KA4O75676 772 aa17.88■□□□□ 0.45
CDK5RAP3-234ENST00000584525 GYS1P13807 737 aa17.88■□□□□ 0.45
CDK5RAP3-234ENST00000584525 DPEP1P16444 411 aa17.88■□□□□ 0.45
CDK5RAP3-234ENST00000584525 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
CDK5RAP3-234ENST00000584525 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
CDK5RAP3-234ENST00000584525 PTCD1O75127 700 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-234ENST00000584525 FCHSD2O94868 740 aa17.87■□□□□ 0.45
CDK5RAP3-234ENST00000584525 MTHFSP49914 203 aa17.87■□□□□ 0.45
CDK5RAP3-234ENST00000584525 PANK3Q9H999 370 aa17.87■□□□□ 0.45
CDK5RAP3-234ENST00000584525 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
CDK5RAP3-234ENST00000584525 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
CDK5RAP3-234ENST00000584525 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-234ENST00000584525 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-234ENST00000584525 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
CDK5RAP3-234ENST00000584525 C10orf71Q711Q0 1435 aa17.84■□□□□ 0.45
CDK5RAP3-234ENST00000584525 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
CDK5RAP3-234ENST00000584525 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
CDK5RAP3-234ENST00000584525 ANKRD26Q9UPS8 1709 aa17.84■□□□□ 0.45
CDK5RAP3-234ENST00000584525 CICQ96RK0 1608 aaPredicted RBP17.83■□□□□ 0.45
CDK5RAP3-234ENST00000584525 APLP1P51693 650 aa17.83■□□□□ 0.44
CDK5RAP3-234ENST00000584525 NFATC2IPQ8NCF5 419 aa17.83■□□□□ 0.44
CDK5RAP3-234ENST00000584525 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-234ENST00000584525 TOMM70O94826 608 aa17.82■□□□□ 0.44
CDK5RAP3-234ENST00000584525 CRKLP46109 303 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-234ENST00000584525 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
CDK5RAP3-234ENST00000584525 SRP68Q9UHB9 627 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-234ENST00000584525 KIF7Q2M1P5 1343 aa17.81■□□□□ 0.44
CDK5RAP3-234ENST00000584525 FKBP8Q14318 412 aa17.81■□□□□ 0.44
CDK5RAP3-234ENST00000584525 C9orf131Q5VYM1 1079 aa17.81■□□□□ 0.44
CDK5RAP3-234ENST00000584525 NMRK2Q9NPI5 230 aa17.81■□□□□ 0.44
CDK5RAP3-234ENST00000584525 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
CDK5RAP3-234ENST00000584525 KCNA3P22001 575 aa17.8■□□□□ 0.44
CDK5RAP3-234ENST00000584525 KNSTRNQ9Y448 316 aa17.8■□□□□ 0.44
CDK5RAP3-234ENST00000584525 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-234ENST00000584525 DDR1Q08345 913 aa17.78■□□□□ 0.44
CDK5RAP3-234ENST00000584525 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-234ENST00000584525 USP42Q9H9J4 1324 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-234ENST00000584525 ZPR1O75312 459 aa17.76■□□□□ 0.43
CDK5RAP3-234ENST00000584525 CHRNA5P30532 468 aa17.76■□□□□ 0.43
CDK5RAP3-234ENST00000584525 IL13P35225 146 aa17.76■□□□□ 0.43
CDK5RAP3-234ENST00000584525 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-234ENST00000584525 DNAJC10Q8IXB1 793 aa17.75■□□□□ 0.43
CDK5RAP3-234ENST00000584525 DNAJC5GQ8N7S2 189 aa17.75■□□□□ 0.43
CDK5RAP3-234ENST00000584525 RNF181Q9P0P0 153 aa17.75■□□□□ 0.43
CDK5RAP3-234ENST00000584525 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
CDK5RAP3-234ENST00000584525 AKAP4Q5JQC9 854 aa17.74■□□□□ 0.43
CDK5RAP3-234ENST00000584525 USPL1Q5W0Q7 1092 aa17.74■□□□□ 0.43
CDK5RAP3-234ENST00000584525 RBM46Q8TBY0 533 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-234ENST00000584525 KDM2BQ8NHM5 1336 aa17.73■□□□□ 0.43
CDK5RAP3-234ENST00000584525 POLRMTO00411 1230 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-234ENST00000584525 TM4SF1P30408 202 aa17.73■□□□□ 0.43
CDK5RAP3-234ENST00000584525 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
CDK5RAP3-234ENST00000584525 LGR6Q9HBX8 967 aa17.73■□□□□ 0.43
CDK5RAP3-234ENST00000584525 N4BP2Q86UW6 1770 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-234ENST00000584525 ZNF831Q5JPB2 1677 aa17.72■□□□□ 0.43
CDK5RAP3-234ENST00000584525 KIF13BQ9NQT8 1826 aa17.71■□□□□ 0.43
CDK5RAP3-234ENST00000584525 SLC39A6Q13433 755 aa17.71■□□□□ 0.43
CDK5RAP3-234ENST00000584525 RRAGCQ9HB90 399 aa17.71■□□□□ 0.43
CDK5RAP3-234ENST00000584525 KIAA1551Q9HCM1 1747 aa17.71■□□□□ 0.43
CDK5RAP3-234ENST00000584525 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.42
CDK5RAP3-234ENST00000584525 CYP19A1P11511 503 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-234ENST00000584525 HTRA3P83110 453 aa17.7■□□□□ 0.42
CDK5RAP3-234ENST00000584525 FSTL1Q12841 308 aa17.7■□□□□ 0.42
CDK5RAP3-234ENST00000584525 RNMTO43148 476 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-234ENST00000584525 HMOX1P09601 288 aa17.69■□□□□ 0.42
CDK5RAP3-234ENST00000584525 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-234ENST00000584525 COL5A3P25940 1745 aaPredicted RBP17.68■□□□□ 0.42
CDK5RAP3-234ENST00000584525 NFIXQ14938 502 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms