RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
SKA2-210ENST00000584089 PBXIP1Q96AQ6 731 aa7.71□□□□□ -1.18
SKA2-210ENST00000584089 ZNF594Q96JF6 807 aaPredicted RBP7.71□□□□□ -1.18
SKA2-210ENST00000584089 GRIP2Q9C0E4 1043 aa7.71□□□□□ -1.18
SKA2-210ENST00000584089 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
SKA2-210ENST00000584089 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L21D6R901 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 DKK1O94907 266 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 CRTC2Q53ET0 693 aaPredicted RBP7.7□□□□□ -1.18
SKA2-210ENST00000584089 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 LYSMD3Q7Z3D4 306 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
SKA2-210ENST00000584089 ZNF358Q9NW07 568 aa7.7□□□□□ -1.18
SKA2-210ENST00000584089 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.69□□□□□ -1.18
SKA2-210ENST00000584089 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
SKA2-210ENST00000584089 M0R2N6 131 aa7.69□□□□□ -1.18
SKA2-210ENST00000584089 SMTNP53814 917 aa7.69□□□□□ -1.18
SKA2-210ENST00000584089 TLR1Q15399 786 aa7.69□□□□□ -1.18
SKA2-210ENST00000584089 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
SKA2-210ENST00000584089 ZSCAN10Q96SZ4 725 aaPredicted RBP7.69□□□□□ -1.18
SKA2-210ENST00000584089 SERTAD1Q9UHV2 236 aa7.69□□□□□ -1.18
SKA2-210ENST00000584089 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
SKA2-210ENST00000584089 PPP1R15AO75807 674 aaPredicted RBP7.68□□□□□ -1.18
SKA2-210ENST00000584089 GTF2E1P29083 439 aaPredicted RBP7.68□□□□□ -1.18
SKA2-210ENST00000584089 SEC13P55735 322 aa7.68□□□□□ -1.18
SKA2-210ENST00000584089 ELOAQ14241 798 aaKnown RBP7.68□□□□□ -1.18
SKA2-210ENST00000584089 PRICKLE2Q7Z3G6 844 aa7.68□□□□□ -1.18
SKA2-210ENST00000584089 ANKMY2Q8IV38 441 aa7.68□□□□□ -1.18
SKA2-210ENST00000584089 A6NJY4 79 aa7.67□□□□□ -1.18
SKA2-210ENST00000584089 CDK2AP1O14519 115 aa7.67□□□□□ -1.18
SKA2-210ENST00000584089 ATG7O95352 703 aa7.67□□□□□ -1.18
SKA2-210ENST00000584089 DPYDQ12882 1025 aa7.67□□□□□ -1.18
SKA2-210ENST00000584089 MTFR1Q15390 333 aa7.67□□□□□ -1.18
SKA2-210ENST00000584089 WDR44Q5JSH3 913 aa7.67□□□□□ -1.18
SKA2-210ENST00000584089 TMEM214Q6NUQ4 689 aaKnown RBP7.67□□□□□ -1.18
SKA2-210ENST00000584089 PPARGC1BQ86YN6 1023 aaKnown RBP7.67□□□□□ -1.18
SKA2-210ENST00000584089 SFI1A8K8P3 1242 aa7.66□□□□□ -1.18
SKA2-210ENST00000584089 GNASQ5JWF2 1037 aa7.66□□□□□ -1.18
SKA2-210ENST00000584089 ARXQ96QS3 562 aa7.66□□□□□ -1.18
SKA2-210ENST00000584089 ARID3AQ99856 593 aa7.66□□□□□ -1.18
SKA2-210ENST00000584089 EPHA4P54764 986 aa7.65□□□□□ -1.18
SKA2-210ENST00000584089 PTSQ03393 145 aa7.65□□□□□ -1.18
SKA2-210ENST00000584089 POU4F2Q12837 409 aa7.65□□□□□ -1.18
SKA2-210ENST00000584089 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
SKA2-210ENST00000584089 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
SKA2-210ENST00000584089 NBPF15Q8N660 670 aa7.65□□□□□ -1.18
SKA2-210ENST00000584089 FAM200AQ8TCP9 573 aa7.65□□□□□ -1.18
SKA2-210ENST00000584089 RHBDD1Q8TEB9 315 aa7.65□□□□□ -1.18
SKA2-210ENST00000584089 SCHIP1Q9P0W5 487 aaPredicted RBP7.65□□□□□ -1.18
SKA2-210ENST00000584089 NOVA2Q9UNW9 492 aaKnown RBP7.65□□□□□ -1.18
SKA2-210ENST00000584089 TNS4Q8IZW8 715 aa7.64□□□□□ -1.19
SKA2-210ENST00000584089 IQSEC3Q9UPP2 1182 aaPredicted RBP7.64□□□□□ -1.19
SKA2-210ENST00000584089 RHOQP17081 205 aa7.63□□□□□ -1.19
SKA2-210ENST00000584089 FOXK2Q01167 660 aa7.63□□□□□ -1.19
SKA2-210ENST00000584089 TSEN2Q8NCE0 465 aaKnown RBP7.63□□□□□ -1.19
SKA2-210ENST00000584089 NIFKQ9BYG3 293 aaKnown RBP7.63□□□□□ -1.19
SKA2-210ENST00000584089 ACIN1Q9UKV3 1341 aaKnown RBP7.62□□□□□ -1.19
SKA2-210ENST00000584089 SENP3-EIF4A1A0A087X0R7 540 aa7.62□□□□□ -1.19
SKA2-210ENST00000584089 SLC35F4A4IF30 521 aa7.62□□□□□ -1.19
SKA2-210ENST00000584089 C4orf17Q53FE4 359 aa7.62□□□□□ -1.19
SKA2-210ENST00000584089 NPAS3Q8IXF0 933 aa7.62□□□□□ -1.19
SKA2-210ENST00000584089 NXF1Q9UBU9 619 aaKnown RBP7.62□□□□□ -1.19
SKA2-210ENST00000584089 ZMIZ1Q9ULJ6 1067 aa7.62□□□□□ -1.19
SKA2-210ENST00000584089 SLC9A9Q8IVB4 645 aa7.61□□□□□ -1.19
SKA2-210ENST00000584089 ZNF295-AS1Q8N0V1 137 aa7.61□□□□□ -1.19
SKA2-210ENST00000584089 HINFPQ9BQA5 517 aa7.61□□□□□ -1.19
SKA2-210ENST00000584089 TIMMDC1Q9NPL8 285 aa7.61□□□□□ -1.19
SKA2-210ENST00000584089 DYRK1BQ9Y463 629 aa7.61□□□□□ -1.19
SKA2-210ENST00000584089 PHKA2P46019 1235 aa7.6□□□□□ -1.19
SKA2-210ENST00000584089 SWI5Q1ZZU3 235 aa7.6□□□□□ -1.19
SKA2-210ENST00000584089 CCDC155Q8N6L0 562 aa7.6□□□□□ -1.19
SKA2-210ENST00000584089 GAS2L2Q8NHY3 880 aa7.6□□□□□ -1.19
SKA2-210ENST00000584089 TSPAN10Q9H1Z9 355 aaPredicted RBP7.6□□□□□ -1.19
SKA2-210ENST00000584089 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
SKA2-210ENST00000584089 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
SKA2-210ENST00000584089 A0A1B0GTH6 734 aa7.59□□□□□ -1.19
SKA2-210ENST00000584089 PPFIA3O75145 1194 aa7.59□□□□□ -1.19
SKA2-210ENST00000584089 TEAD4Q15561 434 aa7.59□□□□□ -1.19
SKA2-210ENST00000584089 STK32AQ8WU08 396 aa7.59□□□□□ -1.19
SKA2-210ENST00000584089 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
SKA2-210ENST00000584089 PLA2G4AP47712 749 aa7.58□□□□□ -1.2
SKA2-210ENST00000584089 FAM69CQ0P6D2 419 aa7.58□□□□□ -1.2
SKA2-210ENST00000584089 TMEM164Q5U3C3 297 aa7.58□□□□□ -1.2
SKA2-210ENST00000584089 STAG2Q8N3U4 1231 aa7.58□□□□□ -1.2
SKA2-210ENST00000584089 ATAD2Q6PL18 1390 aa7.58□□□□□ -1.2
SKA2-210ENST00000584089 F11P03951 625 aa7.57□□□□□ -1.2
SKA2-210ENST00000584089 ITGA6P23229 1130 aa7.57□□□□□ -1.2
SKA2-210ENST00000584089 NOS2P35228 1153 aa7.57□□□□□ -1.2
SKA2-210ENST00000584089 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
SKA2-210ENST00000584089 TBCELQ5QJ74 424 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms