RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SLC34A2O95436 690 aa16.17■□□□□ 0.18
NUP85-224ENST00000583948 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
NUP85-224ENST00000583948 COG3Q96JB2 828 aa16.17■□□□□ 0.18
NUP85-224ENST00000583948 SBF1O95248 1867 aa16.16■□□□□ 0.18
NUP85-224ENST00000583948 CHRNA5P30532 468 aa16.16■□□□□ 0.18
NUP85-224ENST00000583948 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
NUP85-224ENST00000583948 TGFB2P61812 414 aa16.16■□□□□ 0.18
NUP85-224ENST00000583948 RASSF7Q02833 373 aa16.16■□□□□ 0.18
NUP85-224ENST00000583948 PCDH11XQ9BZA7 1347 aa16.16■□□□□ 0.18
NUP85-224ENST00000583948 PCDH11YQ9BZA8 1340 aa16.16■□□□□ 0.18
NUP85-224ENST00000583948 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
NUP85-224ENST00000583948 SLC4A9Q96Q91 983 aa16.15■□□□□ 0.18
NUP85-224ENST00000583948 GGNBP2Q9H3C7 697 aa16.15■□□□□ 0.18
NUP85-224ENST00000583948 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
NUP85-224ENST00000583948 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
NUP85-224ENST00000583948 ARHGEF1Q92888 912 aaKnown RBP16.14■□□□□ 0.17
NUP85-224ENST00000583948 TERF2IPQ9NYB0 399 aa16.14■□□□□ 0.17
NUP85-224ENST00000583948 ARFGEF1Q9Y6D6 1849 aa16.14■□□□□ 0.17
NUP85-224ENST00000583948 GYS1P13807 737 aa16.13■□□□□ 0.17
NUP85-224ENST00000583948 TMF1P82094 1093 aa16.13■□□□□ 0.17
NUP85-224ENST00000583948 NSD3Q9BZ95 1437 aa16.12■□□□□ 0.17
NUP85-224ENST00000583948 SMC1BQ8NDV3 1235 aa16.12■□□□□ 0.17
NUP85-224ENST00000583948 ATG3Q9NT62 314 aa16.12■□□□□ 0.17
NUP85-224ENST00000583948 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
NUP85-224ENST00000583948 KDM2BQ8NHM5 1336 aa16.12■□□□□ 0.17
NUP85-224ENST00000583948 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
NUP85-224ENST00000583948 TRAPPC3LQ5T215 181 aa16.11■□□□□ 0.17
NUP85-224ENST00000583948 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
NUP85-224ENST00000583948 MKRN1Q9UHC7 482 aaKnown RBP16.11■□□□□ 0.17
NUP85-224ENST00000583948 CCDC87Q9NVE4 849 aa16.1■□□□□ 0.17
NUP85-224ENST00000583948 FOXN1O15353 648 aa16.09■□□□□ 0.17
NUP85-224ENST00000583948 DDR1Q08345 913 aa16.09■□□□□ 0.17
NUP85-224ENST00000583948 PIM2Q9P1W9 311 aa16.09■□□□□ 0.17
NUP85-224ENST00000583948 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
NUP85-224ENST00000583948 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
NUP85-224ENST00000583948 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
NUP85-224ENST00000583948 MYH14Q7Z406 1995 aaKnown RBP16.08■□□□□ 0.16
NUP85-224ENST00000583948 FYB1O15117 783 aa16.08■□□□□ 0.16
NUP85-224ENST00000583948 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
NUP85-224ENST00000583948 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
NUP85-224ENST00000583948 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
NUP85-224ENST00000583948 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
NUP85-224ENST00000583948 TMOD3Q9NYL9 352 aa16.08■□□□□ 0.16
NUP85-224ENST00000583948 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
NUP85-224ENST00000583948 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.16
NUP85-224ENST00000583948 POTECB2RU33 542 aa16.07■□□□□ 0.16
NUP85-224ENST00000583948 FKBP8Q14318 412 aa16.07■□□□□ 0.16
NUP85-224ENST00000583948 EMILIN1Q9Y6C2 1016 aa16.07■□□□□ 0.16
NUP85-224ENST00000583948 RTL1A6NKG5 1358 aa16.06■□□□□ 0.16
NUP85-224ENST00000583948 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
NUP85-224ENST00000583948 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
NUP85-224ENST00000583948 NKX1-1Q15270 411 aaPredicted RBP16.06■□□□□ 0.16
NUP85-224ENST00000583948 SMG6Q86US8 1419 aaKnown RBP16.05■□□□□ 0.16
NUP85-224ENST00000583948 FAM161AQ3B820 660 aa16.05■□□□□ 0.16
NUP85-224ENST00000583948 INSRP06213 1382 aa16.04■□□□□ 0.16
NUP85-224ENST00000583948 KDRP35968 1356 aa16.04■□□□□ 0.16
NUP85-224ENST00000583948 RFC4P35249 363 aa16.04■□□□□ 0.16
NUP85-224ENST00000583948 COL5A3P25940 1745 aaPredicted RBP16.03■□□□□ 0.16
NUP85-224ENST00000583948 PPM1GO15355 546 aaPredicted RBP16.03■□□□□ 0.16
NUP85-224ENST00000583948 VEGFAP15692 232 aaPredicted RBP16.02■□□□□ 0.16
NUP85-224ENST00000583948 PHKG2P15735 406 aa16.02■□□□□ 0.16
NUP85-224ENST00000583948 GLTPD2A6NH11 291 aa16.01■□□□□ 0.15
NUP85-224ENST00000583948 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
NUP85-224ENST00000583948 TIAM2Q8IVF5 1701 aa16.01■□□□□ 0.15
NUP85-224ENST00000583948 TESK2Q96S53 571 aa16■□□□□ 0.15
NUP85-224ENST00000583948 EYA1Q99502 592 aa16■□□□□ 0.15
NUP85-224ENST00000583948 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
NUP85-224ENST00000583948 SPG7Q9UQ90 795 aa16■□□□□ 0.15
NUP85-224ENST00000583948 PTCD1O75127 700 aaKnown RBP15.99■□□□□ 0.15
NUP85-224ENST00000583948 FLT4P35916 1363 aa15.99■□□□□ 0.15
NUP85-224ENST00000583948 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
NUP85-224ENST00000583948 POLRMTO00411 1230 aaKnown RBP15.98■□□□□ 0.15
NUP85-224ENST00000583948 LBX1P52954 281 aa15.98■□□□□ 0.15
NUP85-224ENST00000583948 KDM6AO15550 1401 aaPredicted RBP15.97■□□□□ 0.15
NUP85-224ENST00000583948 NFKBIEO00221 500 aa15.97■□□□□ 0.15
NUP85-224ENST00000583948 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
NUP85-224ENST00000583948 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.15
NUP85-224ENST00000583948 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.15
NUP85-224ENST00000583948 LMNB1P20700 586 aa15.96■□□□□ 0.15
NUP85-224ENST00000583948 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
NUP85-224ENST00000583948 RC3H1Q5TC82 1133 aaKnown RBP15.96■□□□□ 0.15
NUP85-224ENST00000583948 IFNL2Q8IZJ0 200 aa15.96■□□□□ 0.15
NUP85-224ENST00000583948 CNTNAP4Q9C0A0 1308 aa15.95■□□□□ 0.14
NUP85-224ENST00000583948 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
NUP85-224ENST00000583948 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
NUP85-224ENST00000583948 ADRA2BP18089 450 aa15.94■□□□□ 0.14
NUP85-224ENST00000583948 TM4SF1P30408 202 aa15.94■□□□□ 0.14
NUP85-224ENST00000583948 VEGFBP49765 207 aa15.94■□□□□ 0.14
NUP85-224ENST00000583948 USPL1Q5W0Q7 1092 aa15.94■□□□□ 0.14
NUP85-224ENST00000583948 CCDC24Q8N4L8 307 aa15.94■□□□□ 0.14
NUP85-224ENST00000583948 ABHD8Q96I13 439 aa15.94■□□□□ 0.14
NUP85-224ENST00000583948 ADAMTS7Q9UKP4 1686 aa15.94■□□□□ 0.14
NUP85-224ENST00000583948 CARMIL3Q8ND23 1372 aa15.93■□□□□ 0.14
NUP85-224ENST00000583948 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
NUP85-224ENST00000583948 CREBZFQ9NS37 354 aa15.93■□□□□ 0.14
NUP85-224ENST00000583948 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
NUP85-224ENST00000583948 TJP1Q07157 1748 aa15.92■□□□□ 0.14
NUP85-224ENST00000583948 DDNO94850 711 aaPredicted RBP15.92■□□□□ 0.14
NUP85-224ENST00000583948 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
NUP85-224ENST00000583948 CNTNAP1P78357 1384 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms