RNA–Protein interactions for RNA: ENST00000583217.1

EIF4A1-227, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-227ENST00000583217 TGFB2P61812 414 aa13.04□□□□□ -0.32
EIF4A1-227ENST00000583217 JMYQ8N9B5 988 aa13.04□□□□□ -0.32
EIF4A1-227ENST00000583217 ATG3Q9NT62 314 aa13.04□□□□□ -0.32
EIF4A1-227ENST00000583217 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
EIF4A1-227ENST00000583217 C10orf71Q711Q0 1435 aa13.04□□□□□ -0.32
EIF4A1-227ENST00000583217 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
EIF4A1-227ENST00000583217 ARHGAP27Q6ZUM4 889 aa13.03□□□□□ -0.32
EIF4A1-227ENST00000583217 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
EIF4A1-227ENST00000583217 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
EIF4A1-227ENST00000583217 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
EIF4A1-227ENST00000583217 ATP6V1AP38606 617 aa13.02□□□□□ -0.33
EIF4A1-227ENST00000583217 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.33
EIF4A1-227ENST00000583217 KLRG1Q96E93 195 aa13.02□□□□□ -0.33
EIF4A1-227ENST00000583217 CLSPNQ9HAW4 1339 aa13.02□□□□□ -0.33
EIF4A1-227ENST00000583217 KDRP35968 1356 aa13.02□□□□□ -0.33
EIF4A1-227ENST00000583217 GYS1P13807 737 aa13.01□□□□□ -0.33
EIF4A1-227ENST00000583217 C9orf131Q5VYM1 1079 aa13.01□□□□□ -0.33
EIF4A1-227ENST00000583217 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
EIF4A1-227ENST00000583217 EYA1Q99502 592 aa13.01□□□□□ -0.33
EIF4A1-227ENST00000583217 TMOD3Q9NYL9 352 aa13.01□□□□□ -0.33
EIF4A1-227ENST00000583217 TONSLQ96HA7 1378 aa13.01□□□□□ -0.33
EIF4A1-227ENST00000583217 PHKG2P15735 406 aa13□□□□□ -0.33
EIF4A1-227ENST00000583217 TMF1P82094 1093 aa13□□□□□ -0.33
EIF4A1-227ENST00000583217 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
EIF4A1-227ENST00000583217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
EIF4A1-227ENST00000583217 WDR90Q96KV7 1748 aa12.99□□□□□ -0.33
EIF4A1-227ENST00000583217 FCHSD2O94868 740 aa12.99□□□□□ -0.33
EIF4A1-227ENST00000583217 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
EIF4A1-227ENST00000583217 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
EIF4A1-227ENST00000583217 BRCA1P38398 1863 aaKnown RBP12.98□□□□□ -0.33
EIF4A1-227ENST00000583217 ZEB1P37275 1124 aaPredicted RBP12.98□□□□□ -0.33
EIF4A1-227ENST00000583217 RC3H1Q5TC82 1133 aaKnown RBP12.98□□□□□ -0.33
EIF4A1-227ENST00000583217 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
EIF4A1-227ENST00000583217 WASHC2AQ641Q2 1341 aa12.97□□□□□ -0.33
EIF4A1-227ENST00000583217 FSTL1Q12841 308 aa12.97□□□□□ -0.33
EIF4A1-227ENST00000583217 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
EIF4A1-227ENST00000583217 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
EIF4A1-227ENST00000583217 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
EIF4A1-227ENST00000583217 CAPN15O75808 1086 aa12.96□□□□□ -0.33
EIF4A1-227ENST00000583217 DDR1Q08345 913 aa12.96□□□□□ -0.33
EIF4A1-227ENST00000583217 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
EIF4A1-227ENST00000583217 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
EIF4A1-227ENST00000583217 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
EIF4A1-227ENST00000583217 C4AP0C0L4 1744 aa12.96□□□□□ -0.34
EIF4A1-227ENST00000583217 MYH14Q7Z406 1995 aaKnown RBP12.95□□□□□ -0.34
EIF4A1-227ENST00000583217 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
EIF4A1-227ENST00000583217 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
EIF4A1-227ENST00000583217 ADRA2BP18089 450 aa12.95□□□□□ -0.34
EIF4A1-227ENST00000583217 PRELPP51888 382 aa12.95□□□□□ -0.34
EIF4A1-227ENST00000583217 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
EIF4A1-227ENST00000583217 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
EIF4A1-227ENST00000583217 FKBP8Q14318 412 aa12.94□□□□□ -0.34
EIF4A1-227ENST00000583217 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
EIF4A1-227ENST00000583217 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
EIF4A1-227ENST00000583217 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
EIF4A1-227ENST00000583217 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 KIF20BQ96Q89 1820 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 ERVV-2B6SEH9 535 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 CHRNA5P30532 468 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 RFC4P35249 363 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 TNS4Q8IZW8 715 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
EIF4A1-227ENST00000583217 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
EIF4A1-227ENST00000583217 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
EIF4A1-227ENST00000583217 COL5A3P25940 1745 aaPredicted RBP12.92□□□□□ -0.34
EIF4A1-227ENST00000583217 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
EIF4A1-227ENST00000583217 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
EIF4A1-227ENST00000583217 C16orf71Q8IYS4 520 aaPredicted RBP12.92□□□□□ -0.34
EIF4A1-227ENST00000583217 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
EIF4A1-227ENST00000583217 TM4SF1P30408 202 aa12.91□□□□□ -0.34
EIF4A1-227ENST00000583217 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
EIF4A1-227ENST00000583217 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
EIF4A1-227ENST00000583217 SBF1O95248 1867 aa12.89□□□□□ -0.35
EIF4A1-227ENST00000583217 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
EIF4A1-227ENST00000583217 RASSF7Q02833 373 aa12.89□□□□□ -0.35
EIF4A1-227ENST00000583217 INTS5Q6P9B9 1019 aaKnown RBP12.89□□□□□ -0.35
EIF4A1-227ENST00000583217 SMC1BQ8NDV3 1235 aa12.89□□□□□ -0.35
EIF4A1-227ENST00000583217 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
EIF4A1-227ENST00000583217 POTECB2RU33 542 aa12.88□□□□□ -0.35
EIF4A1-227ENST00000583217 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
EIF4A1-227ENST00000583217 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
EIF4A1-227ENST00000583217 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
EIF4A1-227ENST00000583217 GLTPD2A6NH11 291 aa12.86□□□□□ -0.35
EIF4A1-227ENST00000583217 CABP4P57796 275 aa12.86□□□□□ -0.35
EIF4A1-227ENST00000583217 NFATC2IPQ8NCF5 419 aa12.86□□□□□ -0.35
EIF4A1-227ENST00000583217 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
EIF4A1-227ENST00000583217 ZNF530Q6P9A1 599 aaPredicted RBP12.85□□□□□ -0.35
EIF4A1-227ENST00000583217 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
EIF4A1-227ENST00000583217 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 VEGFAP15692 232 aaPredicted RBP12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 LMNB1P20700 586 aa12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 TNNT2P45379 298 aaPredicted RBP12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
EIF4A1-227ENST00000583217 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms